SciMLTutorials

Tutorials for doing scientific machine learning (SciML) and high-performance differential equation solving with open source software.

https://github.com/sciml/scimltutorials.jl

Science Score: 54.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    4 of 46 committers (8.7%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (14.5%) to scientific vocabulary

Keywords

dae dde differential-equations differentialequations hacktoberfest julia neural-differential-equations neural-ode ode ordinary-differential-equations partial-differential-equations pde python r scientific-machine-learning sciml sde stochastic-differential-equations

Keywords from Contributors

matrix-exponential jax nerual-differential-equations ai-for-science dynamical-systems julialang numerics neural-sde stan bayesian-inference
Last synced: 6 months ago · JSON representation ·

Repository

Tutorials for doing scientific machine learning (SciML) and high-performance differential equation solving with open source software.

Basic Info
Statistics
  • Stars: 734
  • Watchers: 23
  • Forks: 126
  • Open Issues: 14
  • Releases: 11
Topics
dae dde differential-equations differentialequations hacktoberfest julia neural-differential-equations neural-ode ode ordinary-differential-equations partial-differential-equations pde python r scientific-machine-learning sciml sde stochastic-differential-equations
Created over 9 years ago · Last pushed 6 months ago
Metadata Files
Readme License Citation

README.md

SciMLTutorials.jl: Tutorials for Scientific Machine Learning and Differential Equations

Join the chat at https://julialang.zulipchat.com #sciml-bridged Stable Global Docs

Build status

ColPrac: Contributor's Guide on Collaborative Practices for Community Packages SciML Code Style

SciMLTutorials.jl holds PDFs, webpages, and interactive Jupyter notebooks showing how to utilize the software in the SciML Scientific Machine Learning ecosystem. This set of tutorials was made to complement the documentation and the devdocs by providing practical examples of the concepts. For more details, please consult the docs.

Note: this library has been deprecated and its tutorials have been moved to the repos of the respective packages. It may be revived in the future if there is a need for longer-form tutorials!

Results

To view the SciML Tutorials, go to tutorials.sciml.ai. By default, this will lead to the latest tagged version of the tutorials. To see the in-development version of the tutorials, go to https://tutorials.sciml.ai/dev/.

Static outputs in pdf, markdown, and html reside in SciMLTutorialsOutput.

Video Tutorial

Video Tutorial

Interactive Notebooks

To generate the interactive notebooks, first install the SciMLTutorials, instantiate the environment, and then run SciMLTutorials.open_notebooks(). This looks as follows:

julia ]add SciMLTutorials#master ]activate SciMLTutorials ]instantiate using SciMLTutorials SciMLTutorials.open_notebooks()

The tutorials will be generated at your pwd() in a folder called generated_notebooks.

Note that when running the tutorials, the packages are not automatically added. Thus you will need to add the packages manually or use the internal Project/Manifest tomls to instantiate the correct packages. This can be done by activating the folder of the tutorials. For example,

julia using Pkg Pkg.activate(joinpath(pkgdir(SciMLTutorials),"tutorials","models")) Pkg.instantiate()

will add all of the packages required to run any tutorial in the models folder.

Contributing

All of the files are generated from the Weave.jl files in the tutorials folder. The generation process runs automatically, and thus one does not necessarily need to test the Weave process locally. Instead, simply open a PR that adds/updates a file in the "tutorials" folder and the PR will generate the tutorial on demand. Its artifacts can then be inspected in the Buildkite as described below before merging. Note that it will use the Project.toml and Manifest.toml of the subfolder, so any changes to dependencies requires that those are updated.

Reporting Bugs and Issues

Report any bugs or issues at the SciMLTutorials repository.

Inspecting Tutorial Results

To see tutorial results before merging, click into the BuildKite, click onto Artifacts, and then investigate the trained results.

Manually Generating Files

To run the generation process, do for example:

julia ]activate SciMLTutorials # Get all of the packages using SciMLTutorials SciMLTutorials.weave_file(joinpath(pkgdir(SciMLTutorials),"tutorials","models"),"01-classical_physics.jmd")

To generate all of the files in a folder, for example, run:

julia SciMLTutorials.weave_folder(joinpath(pkgdir(SciMLTutorials),"tutorials","models"))

To generate all of the notebooks, do:

julia SciMLTutorials.weave_all()

Each of the tuturials displays the computer characteristics at the bottom of the benchmark.

Owner

  • Name: SciML Open Source Scientific Machine Learning
  • Login: SciML
  • Kind: organization
  • Email: contact@chrisrackauckas.com

Open source software for scientific machine learning

Citation (CITATION.bib)

@article{DifferentialEquations.jl-2017,
 author = {Rackauckas, Christopher and Nie, Qing},
 doi = {10.5334/jors.151},
 journal = {The Journal of Open Research Software},
 keywords = {Applied Mathematics},
 note = {Exported from https://app.dimensions.ai on 2019/05/05},
 number = {1},
 pages = {},
 title = {DifferentialEquations.jl – A Performant and Feature-Rich Ecosystem for Solving Differential Equations in Julia},
 url = {https://app.dimensions.ai/details/publication/pub.1085583166 and http://openresearchsoftware.metajnl.com/articles/10.5334/jors.151/galley/245/download/},
 volume = {5},
 year = {2017}
}

GitHub Events

Total
  • Watch event: 23
  • Delete event: 1
  • Push event: 1
  • Pull request event: 2
  • Fork event: 2
  • Create event: 1
Last Year
  • Watch event: 23
  • Delete event: 1
  • Push event: 1
  • Pull request event: 2
  • Fork event: 2
  • Create event: 1

Committers

Last synced: 8 months ago

All Time
  • Total Commits: 797
  • Total Committers: 46
  • Avg Commits per committer: 17.326
  • Development Distribution Score (DDS): 0.739
Past Year
  • Commits: 3
  • Committers: 2
  • Avg Commits per committer: 1.5
  • Development Distribution Score (DDS): 0.333
Top Committers
Name Email Commits
github-actions[bot] 4****] 208
Chris Rackauckas a****s@c****m 146
Christopher Rackauckas C****t@C****m 92
github-actions[bot] a****s@g****m 64
CompatHelper Julia c****y@j****g 48
Chris de Graaf me@c****v 29
Samuel Isaacson i****s 27
Elliot Saba s****t@g****m 25
ChrisRackauckas me@c****m 21
Alexander Seiler s****x@g****m 17
ashutosh-b-b a****3@g****m 17
YingboMa m****5@g****m 17
Sebastian Micluța-Câmpeanu m****5@g****m 13
adam.gerlach.1@us.af.mil a****1@u****l 6
Jane E. Herriman j****e@c****u 5
Mosè Giordano m****e@g****g 5
Ranjan Anantharaman r****n@g****m 5
Shahriar Iravanian s****n@s****m 4
Shahriar Iravanian s****n@e****u 4
Dan d****h@g****m 4
$(ci_cfg.username) $****) 3
Vaibhavdixit02 v****t@g****m 3
Adam R Gerlach a****1@a****m 3
Moelf p****n@j****v 3
MaxCan-Code 3****e 3
Mikhail Vaganov a****7@m****u 2
Ruibin Liu r****8@g****m 2
dependabot[bot] 4****] 2
danielmk d****c@g****m 2
Viral B. Shah V****h 1
and 16 more...

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 16
  • Total pull requests: 86
  • Average time to close issues: 11 months
  • Average time to close pull requests: 3 months
  • Total issue authors: 15
  • Total pull request authors: 14
  • Average comments per issue: 2.75
  • Average comments per pull request: 0.17
  • Merged pull requests: 54
  • Bot issues: 0
  • Bot pull requests: 64
Past Year
  • Issues: 1
  • Pull requests: 0
  • Average time to close issues: about 14 hours
  • Average time to close pull requests: N/A
  • Issue authors: 1
  • Pull request authors: 0
  • Average comments per issue: 1.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • ChrisRackauckas (2)
  • BouarfaMahi (1)
  • rlars (1)
  • KZiemian (1)
  • DMax1314 (1)
  • sharanry (1)
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  • truedichotomy (1)
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  • AlexanderSimWS (1)
  • phpsmarter (1)
  • djinnome (1)
  • cobac (1)
  • Mohammedmaaz541 (1)
  • muendlein (1)
Pull Request Authors
  • github-actions[bot] (62)
  • ChrisRackauckas (5)
  • staticfloat (5)
  • dependabot[bot] (3)
  • ViralBShah (2)
  • Ruibin-Liu (2)
  • TorkelE (1)
  • devmotion (1)
  • sharanry (1)
  • hurricane007 (1)
  • ranocha (1)
  • YingboMa (1)
  • ArnoStrouwen (1)
  • thazhemadam (1)
Top Labels
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Packages

  • Total packages: 3
  • Total downloads:
    • julia 9 total
  • Total dependent packages: 0
    (may contain duplicates)
  • Total dependent repositories: 0
    (may contain duplicates)
  • Total versions: 25
proxy.golang.org: github.com/SciML/SciMLTutorials.jl
  • Versions: 11
  • Dependent Packages: 0
  • Dependent Repositories: 0
Rankings
Dependent packages count: 5.5%
Average: 5.7%
Dependent repos count: 5.9%
Last synced: 6 months ago
proxy.golang.org: github.com/sciml/scimltutorials.jl
  • Versions: 11
  • Dependent Packages: 0
  • Dependent Repositories: 0
Rankings
Dependent packages count: 5.5%
Average: 5.7%
Dependent repos count: 5.9%
Last synced: 6 months ago
juliahub.com: SciMLTutorials

Tutorials for doing scientific machine learning (SciML) and high-performance differential equation solving with open source software.

  • Versions: 3
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 9 Total
Rankings
Forks count: 0.6%
Stargazers count: 0.6%
Dependent repos count: 9.9%
Average: 12.5%
Dependent packages count: 38.9%
Last synced: 6 months ago

Dependencies

.github/workflows/CompatHelper.yml actions
  • actions/checkout v4 composite
.github/workflows/TagBot.yml actions
  • JuliaRegistries/TagBot v1 composite