Releases | Open Source Science

From `CHANGELOG.md`

Changed

Increase string length for reading lines from HEMCO standalone grid file for 0.125x0.15625 global resolution
Bumped jinja2==3.1.5 to jinja2==3.1.6 in docs/requirements.txt to fix a security issue
Updated ReadTheDocs documentation to state that we are using Spack v0.23.1 in the Spack installation guide
Updated the ReadTheDocs "Known Bugs" page to include links to open and resolved issues

Fixed

Fixed print in adjoint subroutine for getting current emissions

Pull requests included

Fix print in adjoint code for getting current emissions by @lizziel in https://github.com/geoschem/HEMCO/pull/332
Increase string length for reading lines from HEMCO standalone grid file by @msulprizio in https://github.com/geoschem/HEMCO/pull/335
HEMCO 3.11.2 release by @yantosca in https://github.com/geoschem/HEMCO/pull/338

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.11.1...3.11.2

- Fortran
Published by yantosca 7 months ago

From `CHANGELOG.md`

Added

Added option to enable InvMEGAN manual diagnostic output
Added supplemental guide documentation updates in the geos-chem-shared-docs submodule
Added Lons and Lats to FileData type to store bounds of mask files
Added definition of 0.125x0.15625 grid resolution

Changed

Use USTAR from meteorology instead of calculating from reference 10m wind in DustDead extension

Pull requests included

Option to (re-)enable manual InvMEGAN diagnostics. by @drnimbusrain in https://github.com/geoschem/HEMCO/pull/325
HEMCO 3.11.1 release by @yantosca in https://github.com/geoschem/HEMCO/pull/327

New Contributors

@drnimbusrain made their first contribution in https://github.com/geoschem/HEMCO/pull/325

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.11.0...3.11.1

- Fortran
Published by yantosca 9 months ago

From `CHANGELOG.md`

Added

Added Lons and Lats to FileData type to store bounds of mask files
Added definition of 0.125x0.15625 grid resolution

Changed

Use USTAR from meteorology instead of calculating from reference 10m wind in DustDead extension

Fixed

Fixed improper handling of mask files by removing code that overwrote mask file years and months with lat/lon values and later hardcoded year and month values to -999

Pull requests included

Use USTAR read from GEOS instead of calculating from U10M and V10M by @yuanjianz in https://github.com/geoschem/HEMCO/pull/279
Merge updates from HEMCO 3.10.2 into dev/3.11.0 by @yantosca in https://github.com/geoschem/HEMCO/pull/309
Fix improper handling of date timestamps and lat/lon bounds for mask files by @msulprizio in https://github.com/geoschem/HEMCO/pull/311
Bring updates from HEMCO 3.10.3 into the dev/3.11.0 branch by @yantosca in https://github.com/geoschem/HEMCO/pull/319
Add capability to run HEMCO at 0.125x0.15625 resolution by @msulprizio in https://github.com/geoschem/HEMCO/pull/290
Release/3.11.0 by @yantosca in https://github.com/geoschem/HEMCO/pull/322

New Contributors

@yuanjianz made their first contribution in https://github.com/geoschem/HEMCO/pull/279

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.10.3...3.11.0

- Fortran
Published by yantosca 10 months ago

From `CHANGELOG.md`

Added

Added commented out debug print options useful for debugging HEMCO in MPI models

Fixed

Fixed bug setting destination grid object sigma vector passed to MESSy for vertical regridding
Updated README to fix display of workflow badges

Pull Requests Included

Fix bug setting destination grid object sigma vector passed to MESSy by @lizziel in https://github.com/geoschem/HEMCO/pull/314
allowing workflow badges to show by @K20shores in https://github.com/geoschem/HEMCO/pull/316
Add commented out debug code useful for MPI debugging by @lizziel in https://github.com/geoschem/HEMCO/pull/317
HEMCO release 3.10.3 by @lizziel in https://github.com/geoschem/HEMCO/pull/318

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.10.2...3.10.3

- Fortran
Published by lizziel 11 months ago

From `CHANGELOG.md`

Added

Added .zenodo.json for auto-DOI generation upon version releases
Added GitHub Actions tests to build and test HEMCO on Windows, macOS, and Ubuntu automatically with each submitted PR

Changed

Bumped jinja2 to version 3.1.5 in docs/requirements.txt to fix a security issue
Turned off map_a2a pole averaging when using CESM to avoid core-dependency in 2D emissions
Updated ReadTheDocs documentation for AWS CLI

Fixed

- Updated several prints to limit to root thread to reduce log redundancy when using MPI

Pull requests included

Added .zenodo.json file and updated jinja2 to 3.1.5 (security fix) by @yantosca in https://github.com/geoschem/HEMCO/pull/304
Add CI builds for macOS, Windows, and Ubuntu by @K20shores in https://github.com/geoschem/HEMCO/pull/299
Turn off map_a2a pole-averaging when using CESM by @lizziel in https://github.com/geoschem/HEMCO/pull/306
HEMCO release 3.10.2 by @yantosca in https://github.com/geoschem/HEMCO/pull/308

New Contributors

@K20shores made their first contribution in https://github.com/geoschem/HEMCO/pull/299

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.10.1...3.10.2

- Fortran
Published by yantosca 12 months ago

From `CHANGELOG.md`

Added

Added optional LUN argument to ConfigInit to allow external models to pass LUN of existing log file
Added two log LUN variables (stdLogLUN and hcoLogLUN) to HcoState%Config for stdout and HEMCO log and initialize both in ConfigInit to stdout or optional LUN (if passed)
Added output argument LUN to HCO_LOGFILE_OPEN to update HcoState%Config%hcoLogLun to LUN of new log (if using)
Added optional LUN argument to HCO_MSG, HCO_WARNING, and HCO_ERROR to specify log to print to
Added special log handling for CESM to ignore LogFile entry in HEMCO_Config.rc (will get passed CAM log LUN to use instead)

Changed

Changed interfaces HCO_MSG, HCO_WARNING, and HCO_ERROR to each be a single subroutine that does not use HcoState%Config%Err
Changed HCO_MSG, HCO_WARNING, and HCO_ERROR to be independent of verbose and cores
Updated calls to HCO_MSG to send output to HcoState%Config%hcoLogLUN
Updated calls to HCO_WARNING to print to stdout unless related to units
Replaced usage of HCO_IsVerb with HcoState_Config%doVerbose
Changed documentation in HCO_Error_Mod.F90 to summarize error and log handling in HEMCO
Updated ReadTheDocs "Understand what error messages mean" supplemental guide

Fixed

Fixed excessive prints when using MPI
Fixed F77 formating in hcox_dustdead_mod.F

Removed

Removed warnings count in HcoState%Config%Err
Removed RC argument in HCO_WARNING
Deleted subroutine HCO_IsVerb
Remove print of HcoDiagn%MassScal since never set in the model
Added ReadTheDocs documentation for the HEMCO LogFile setting

Pull requests included

Remove excessive prints when using MPI by @lizziel in https://github.com/geoschem/HEMCO/pull/296
Improve log flexibility in HEMCO by @lizziel in https://github.com/geoschem/HEMCO/pull/298
Fixes to build and run in GEOS by @lizziel in https://github.com/geoschem/HEMCO/pull/300
HEMCO release 3.10.1 by @yantosca in https://github.com/geoschem/HEMCO/pull/302

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.10.0...3.10.1

- Fortran
Published by yantosca about 1 year ago

From `CHANGELOG.md`

Added

Added TSOIL1 field to ExtState
Added download_data.py and download_data.yml to the run folder. These will be copied into HEMCO standalone rundirs
Added run/cleanRunDir.sh script to remove old output files & log files
Added documentation for the HEMCO 3.10.0 release, including HEMCO standalone dry-run documentation

Changed

Added emission factors for ALK6, C4H6, EBZ, STYR, TMB for GFED and FINN biomass burning extensions
Updated soil NOx extention to include the option to use soil temperature and parameterization based on Yi Wang et al. (ERL, 2021) instead of the temperature at 2 meters.
Updated HEMCO standalone to print the dry-run header to the HEMCO log file unit HcoState%Config%Err%Lun only if the file is opened
ReadTheDocs update: Now use GNU 12.2.0 compilers in environment file examples
Updated runHEMCO.sh standalone script: Change partitions, and pipe output to log file

Fixed

Fixed formatting error in .github/workflows/stale.yml that caused the Mark Stale Issues action not to run
Updated to jinja2==3.1.4 in docs/requirements.txt (fixes a security issue)

Removed

Example "Scale (or zero) emissions with a rectangular mask" from ReadTheDocs. This is currently not working.

See the GEOS-Chem 14.5.0 page for a complete list of updates.

Pull requests included

Fix inconsistent pressure units in HEMCO standalone by @yantosca in https://github.com/geoschem/HEMCO/pull/284
Add emission factors for ALK6, C4H6, EBZ, STYR, TMB emissions in GFED and FINN biomass burning by @yantosca in https://github.com/geoschem/HEMCO/pull/285
Updated soil NOx scheme from Yi Wang et al. (2021) as an option by @msulprizio in https://github.com/geoschem/HEMCO/pull/287
Bugfix: Restore stale workflow functionality by @msulprizio in https://github.com/geoschem/HEMCO/pull/289
Add HEMCO-standalone dry-run data download scripts by @yantosca in https://github.com/geoschem/HEMCO/pull/295
ReadTheDocs updates for HEMCO 3.10.0 by @yantosca in https://github.com/geoschem/HEMCO/pull/292

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.9.3...3.10.0

- Fortran
Published by yantosca over 1 year ago

CHANGELOG

Fixed

Added brackets around exempt-issue-labels list in .github/workflows/stale.yml

Pull requests included

None

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.9.2...3.9.3

- Fortran
Published by yantosca over 1 year ago

From `CHANGELOG.md`

Changed

RTD updates: Converted several :option: tags to subsections and updated references accordingly

Fixed

Typos in RTD doc file docs/source/hco_ref_guide/hemco-config.rst

Removed

Manual InvMEGAN diagnostics from src/Extensions/hcox_megan_mod.F90; Activate these with HEMCO_Diagn.rc instead

Pull Requests Included

Remove InvMEGAN manual diagnostics from hcoxmeganmod.F90 by @yantosca in https://github.com/geoschem/HEMCO/pull/282

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.9.1...3.9.2

- Fortran
Published by yantosca over 1 year ago

From `CHANGELOG.md`

Fixed

Fixed formatting error in .github/workflows/stale.yml that caused the Mark Stale Issues action not to run (PR #280)

Pull Requests Included

Now use comma-separated list for exempt-issue-labels YAML tag in stale.yml by @yantosca in https://github.com/geoschem/HEMCO/pull/280

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.9.0...3.9.1

- Fortran
Published by yantosca over 1 year ago

CHANGELOG

Added

GitHub Action config file .github/workflows/stale.yml, which replaces StaleBot

Changed

Converted Github issue templates into issue forms using YAML definition files
Updated Python package versions for ReadTheDocs in docs/requirements.txt
Now request Python 3.12 for ReadTheDocs builds in .readthedocs.yaml

Removed

GitHub config files .github/stale.yml and .github/no-response.yml

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.8.1...3.9.0

- Fortran
Published by yantosca over 1 year ago

From `CHANGELOG.md`

Changed

Now allow up to 10 nested brackets (((( )))) in the HEMCO_Config.rc file
Now use short submodule names (i.e. w/o path) in .gitmodules

Fixed

Limit volcano climatology file read message to root core
Updated hco_interp_mod.F90 to handle 3D NEI emissions.

Pull requests included

Allow up to 10 nested brackets in the HEMCO_Config.rc file by @yantosca in https://github.com/geoschem/HEMCO/pull/262
Now use short submodule names in .gitmodules by @yantosca in https://github.com/geoschem/HEMCO/pull/266

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.8.0...3.8.1

- Fortran
Published by msulprizio almost 2 years ago

From `CHANGELOG.md`

Changed

Updated TOMAS_Jeagle sea salt extension

Fixed

Updated IsModelLevel check for CESM and WRF-GC
Interpolation error for 8-day MODIS LAI files (removed month loop in GetIndex2Interp)

Pull requests merged

Implementation of TOMAS in GCHP by @Jourdan-He in https://github.com/geoschem/HEMCO/pull/164
Update TOMAS extensions for use in GCHP by @msulprizio in https://github.com/geoschem/HEMCO/pull/251
Update IsModelLevel check for CESM and WRF-GC by @jimmielin in https://github.com/geoschem/HEMCO/pull/244
Change GEOS-IT meteorology constants file year by @lizziel in https://github.com/geoschem/HEMCO/pull/252
Remove month loop in GetIndex2Interp by @nicholasbalasus in https://github.com/geoschem/HEMCO/pull/254
TOMAS fixes to address failure to integrate in dev/14.3.0 by @BettyCroft in https://github.com/geoschem/HEMCO/pull/259

New Contributors

@Jourdan-He made their first contribution in https://github.com/geoschem/HEMCO/pull/164
@BettyCroft made their first contribution in https://github.com/geoschem/HEMCO/pull/259

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.7.2...3.8.0

- Fortran
Published by msulprizio about 2 years ago

CHANGELOG

Added

Script .release/changeVersionNumbers.sh to change version numbers before a new HEMCO release

Changed

Increased netCDF variable string length from 50 to 100

Fixed

Rename HEMCO_Config.rc.sample to HEMCO_Config.rc in createRunDir.sh if sample is used.
Added fix to turn off emissions extensions when EMISSIONS logical is false

New Contributors

@nicholasbalasus made their first contribution in https://github.com/geoschem/HEMCO/pull/245

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.7.1...3.7.2

- Fortran
Published by yantosca about 2 years ago

CHANGELOG

Changed

Updated version numbers to 3.7.1
Make Hg0 emission factors in hcox_gfed_include_gfed4.H multipliers of the CO emission factor
Removed superfluous routine GetExtSpcVal_Dr in src/Core/hco_extlist_mod.F90
NetCDF routines in src/Shared/NcdfUtil now use the Fortran-90 API
Overhauled vertical regridding src/Core/hco_interp_mod.F90
Removed INFLATE (but retained its behavior only for 47L -> 72L vertical regridding, warning users that this isn't recommended)
ModelLev_Interpolate is only called when the input is 47/48, 72/73, or 102/103 levels (otherwise, MESSy is used).
A bug that averaged the wrong number of levels in COLLAPSE is fixed (and edges are now sampled instead of averaged).
Removed the now superfluous NC_ISMODELLEVEL and NC_SISIGMALEVEL from src/Shared/NcdfUtil/hco_ncdf_mod.F90
Removed old code and references to GEOS-4.

Fixed

Fixed incorrect XMIN, XMAX values in HEMCO_sa_Grid.025x03125.rc and HEMCO_sa_Grid.05x0625.rc
Fixed line length too long for the GC_72_EDGE_SIGMA variable in src/Core/hcoio_read_std_mod.F90

New Contributors

@emroy00 made their first contribution in https://github.com/geoschem/HEMCO/pull/215

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.7.0...3.7.1

- Fortran
Published by yantosca over 2 years ago

What's Changed

Reduce logfile output in HEMCO, and combine Verbose and Warnings into a single switch by @yantosca in https://github.com/geoschem/HEMCO/pull/182
Remove src/Shared/NcdfUtil/perl folder by @yantosca in https://github.com/geoschem/HEMCO/pull/183
Update GFED4 biomass burning emission factors and add furans by @msulprizio in https://github.com/geoschem/HEMCO/pull/189
Deprecate HEMCOCESM preprocessor constant. Now use MODELCESM by @jimmielin in https://github.com/geoschem/HEMCO/pull/197
Fixes for reading masks in HEMCO (merge bugfix/masks into HEMCO 3.7.0) by @yantosca in https://github.com/geoschem/HEMCO/pull/198
Remove computational bottlenecks in hcocalcmod.F90 by @yantosca in https://github.com/geoschem/HEMCO/pull/201
Write HEMCO restart files to the rundir "Restarts/" subdirectory by @yantosca in https://github.com/geoschem/HEMCO/pull/202
Bug fix: Allow mask files ending in ".$NC" not to be interpreted as a mask having no file by @yantosca in https://github.com/geoschem/HEMCO/pull/205
Increase the string length for reading lines from HEMCO standalone grid by @msulprizio in https://github.com/geoschem/HEMCO/pull/207
Update tracer names in RnPbBe extension by @msulprizio in https://github.com/geoschem/HEMCO/pull/214
Update HCOWARNING arguments in MODELGEOS block to avoid GEOS build … by @lizziel in https://github.com/geoschem/HEMCO/pull/219
Prevent run-time crash if using GEOSIT meteorolology directory by @lizziel in https://github.com/geoschem/HEMCO/pull/220
Change GEOS-IT meteorology constants year from 2011 to 2018 by @lizziel in https://github.com/geoschem/HEMCO/pull/223
Print HEMCO verbose status and volcano extension on root thread only by @lizziel in https://github.com/geoschem/HEMCO/pull/221
Fix bug in volcano extension causing crash when volcano turned off by @lizziel in https://github.com/geoschem/HEMCO/pull/230
Fix nvhpc compiler error in CESM due to line length exceeded by @lizziel in https://github.com/geoschem/HEMCO/pull/240

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.6.2...3.7.0

- Fortran
Published by msulprizio over 2 years ago

CHANGELOG

Fixed

Fix nvhpc compiler error in CESM due to line length exceeded by @lizziel in https://github.com/geoschem/HEMCO/pull/240

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.6.2...3.6.3

- Fortran
Published by yantosca over 2 years ago

hemco - HEMCO 3.6.2

Release date: 02 Mar 2023

NOTE: This release contains zero-diff updates. There are no science or other structural changes.

CHANGELOG

Added

Added .github/config.yml with settings for the issue chooser page

Changed

Replace description: with about: in GitHub issue templates
The PR template is now .github/PULL_REQUEST_TEMPLATE.md

Fixed

Now point to proper commit of the geos-chem-shaed-docs submodule

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.6.1...3.6.2

- Fortran
Published by yantosca almost 3 years ago

CHANGELOG

Added

GEOS-only updates by Christoph Keller by @lizziel in https://github.com/geoschem/HEMCO/pull/191
Remove memory leaks in HEMCO core and standalone routines (closes #190) by @yantosca in https://github.com/geoschem/HEMCO/pull/194

Changed

Simplify Github issue and pull request templates by @msulprizio in https://github.com/geoschem/HEMCO/pull/195
Throw an error if HEMCO reads netCDF data on 360day, 365day, or noleap calendars by @yantosca in https://github.com/geoschem/HEMCO/pull/193

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.6.0...3.6.1

- Fortran
Published by yantosca almost 3 years ago

hemco - HEMCO 3.6.0

Release date: 201 Feb 2023

This is release features the updates listed below.

From `CHANGELOG.md`

Added

Added MAPL_ESMF compiler option for use with GCHP and GEOS
New "Parallelize GEOS-Chem and HEMCO source code" guide on ReadTheDocs
Updated documentation describing a masking error that can happen when performing simulations with cropped horizontal grids

Changed

Set HCO_MISSVAL to MAPL missing value (1e15) if using GCHP or GEOS
Use fraction surface type inputs instead of ExtState%WLI
The version number in docs/source/conf.py is now 3.6.0
Updated compilation output splash screen in compiling.rst ReadTheDocs file

Fixed

Bug fix for inserting hard breaks in hemco-config.rst ReadTheDocs file

Removed

Removed old kludge for MAPL missing data if applying mask
Removed ExtState field for water-land-ice index (WLI)

What's Changed

Use MAPL_UNDEF value for HEMCO missing values if using GCHP or GEOS by @lizziel in https://github.com/geoschem/HEMCO/pull/171
Retire ExtState%WLI (land-water-ice index) by @lizziel in https://github.com/geoschem/HEMCO/pull/170
Add DimMax property to ModelSpc for HEMCO_CESM interface. by @jimmielin in https://github.com/geoschem/HEMCO/pull/186

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.5.2...3.6.0

- Fortran
Published by msulprizio about 3 years ago

hemco - HEMCO 3.5.2

Release date: 29 Nov 2022

This is a bug fix release featuring the updates and fixes listed below.

From `CHANGELOG.md`

Added

Added sanitizer option for detecting memory leaks in HEMCO standalone during build

Changed

Remove unused, commented-out code in src/Extensions/hcox_dustdead_mod.F
Replaced placeholder error messages in src/Core/hco_config_mod.F90 with more informational messages (often including the line of the HEMCO_Config.rc in the printout)
Added improved documentation for time cycle flag EFYO in ReadTheDocs

Fixed

Removed memory leaks that were identified by the code sanitizer

What's Changed

Fix memory leaks and other issues identified by the code sanitizer by @yantosca in https://github.com/geoschem/HEMCO/pull/159

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.5.1...3.5.2

- Fortran
Published by msulprizio about 3 years ago

hemco - HEMCO 3.5.1

Release date: 03 Nov 2022

This is a bug fix release featuring the updates listed below.

What's Changed

Change Inst%NP to Inst%NumP in HCOXSeasaltMod for CESM compatibility by @jimmielin in https://github.com/geoschem/HEMCO/pull/175

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.5.0...3.5.1

- Fortran
Published by msulprizio over 3 years ago

hemco - HEMCO 3.5.0

Release date: 25 Oct 2022

This version features the following updates since HEMCO 3.4.0.

From `CHANGELOG.md`

Added

Support for MAPL 2.16 (needed by GCHP and GEOS)
Bug fix for HEMCO standalone run directory creation
Bug fix: If HEMCO masks are specified as lon1/lat1/lon2/lat2, then don't try to read from disk
Documentation from the GEOS-Chem wiki (now on ReadTheDocs)
Badges for the ReadTheDocs front page
Bug fix for masking issues in MPI environment (for WRF, CESM)
Mapping of CAM-Chem species to GFED4 (for CESM)
New documentation for hemco.readthedocs.io, migrated from GC wiki
Updated documentation on vertical regridding behavior

Changed

Ignore non-printing characters (e.g. tabs) when readingHEMCO_Config.rc. This had caused a bug in GCHP.
Updated module names for MAPL 2.16 upgrade
"Diagnostic counter zero" warning is now printed at warning level 2 (instead of 1)
OFFLINE_BIOGENICVOC emissions in MEGAN now include species MOH

What's Changed

Bug fix in megan extension by @lizziel in https://github.com/geoschem/HEMCO/pull/140
MAPL 2.16 updates (on top of HEMCO 3.4.0) by @yantosca in https://github.com/geoschem/HEMCO/pull/129
Strip out tabs and end-of-line comments when reading from HEMCO_Config.rc -- Closes #150 by @yantosca in https://github.com/geoschem/HEMCO/pull/151
Change diagnostic counter zero warning from warning level 1 to 2 by @lizziel in https://github.com/geoschem/HEMCO/pull/148
Docs updates on vertical regridding and HEMCO_Config.rc by @jimmielin in https://github.com/geoschem/HEMCO/pull/154
Add fixes for generating HEMCO standalone run directories by @msulprizio in https://github.com/geoschem/HEMCO/pull/155
Add fix to restore copying all needed HEMCO_Config.rc files when creating HEMCO standalone run directories by @msulprizio in https://github.com/geoschem/HEMCO/pull/157
Fix masking issues in MPI (WRF, CESM) environment by @jimmielin in https://github.com/geoschem/HEMCO/pull/161
Map CAM-chem species list to GFED4 by @jimmielin in https://github.com/geoschem/HEMCO/pull/158

Full Changelog: https://github.com/geoschem/HEMCO/compare/3.4.0...3.5.0

- Fortran
Published by msulprizio over 3 years ago

New features in this version:

Retire CH4 wetlands emissions extension
Make sure each routine exits HEMCO with an error message (even if a placeholder message is used)
Fixed syntax error that caused more than 72 columns of fixed-format Fortran code in hcoxtomasdustdead_mod.F
Added updates for HEMCO running in the NASA/GEOS ESM
Prevent undefined variable when calculating vertical scale factor
GCHP bug fix: revert to all zeros in criteria for restart field not filled
Several fixes for OpenMP parallelization and numerical stability
Prevent out-of-bounds error in HEMCO vertical interpolation
Set MEGAN biogenic annual emission factors to zero in before computing them
Updated ReadTheDocs documentation

For more information, see our HEMCO manual at https://hemco.readthedocs.io

- Fortran
Published by yantosca almost 4 years ago

hemco - HEMCO 3.3.0

Release date 02 May 2022

New Features - Updated Extensions/hcoxgcRnPbBe_mod.F90 to use Zhang et al 2021 emissions (now the default) - Reference: https://acp.copernicus.org/articles/21/1861/2021/

- Fortran
Published by yantosca almost 4 years ago

hemco - HEMCO 3.2.2

Release date: 01 Dec 2021

Contains the following bug fixes: - Restore updating of manual HEMCO diagnostics, which had been clobbered due to a prior Git merge - NOTE: This affects only the CH4, Hg, and TOMAS simulations

For more information, please see: - geoschem/HEMCO 3.2.2 milestone

- Fortran
Published by yantosca about 4 years ago

hemco - HEMCO 3.2.1

Release date: 15 Nov 2021

Contains the following bug fixes: - Add patch branches to continuous integration tests; update HEMCO version to 3.2.1 - Fix indexing of species in hcoxseasaltmod.F90 when using marinePOA option

For more information, please see: - geoschem/HEMCO 3.2.1 milestone

- Fortran
Published by yantosca over 4 years ago

Contains the following updates: - GCHP adjoint updates - Modify volcano extension so that dry-run option also looks for climatology file - Add climatology input to volcano extension - Include PET number in error message if using ESMF - Send all HCO_ERROR messages to stderr and write from all threads - HEMCO diagnostics and standalone config files for consistency with GEOS-Chem updates

For more information, please see: - 3.2.0 milestone for geoschem/HEMCO

- Fortran
Published by yantosca over 4 years ago

hemco - HEMCO 3.1.1

Release date: 10 Sep 2021

This release fixes the following issue identified since HEMCO 3.1.0:

Fix to HEMCO lightning flash rate diagnostic units
Fix HEMCO's createRunDir.sh script to replace additional added tokens

Please see the following links for more information on this version.

Overview

HEMCO 3.1.1 milestone

- Fortran
Published by msulprizio over 4 years ago

hemco - HEMCO 3.1.0

Release date: 07 Sep 2021

This is the release for HEMCO 3.1.0. Major updates since HEMCO 3.0.0 include:

Blowing snow emissions of sea salt and sea salt bromide added to sea salt extension
Add HEMCO_INTERFACE cache variable to CMake build

Please see the following links for more information on this version.

Overview

HEMCO 3.1.0 milestone

Documentation

HEMCO User's Guide

- Fortran
Published by msulprizio over 4 years ago

hemco - HEMCO 3.0.0

HEMCO 3.0.0 18 June 2021

This is the official release for HEMCO 3.0.0. Major updates since HEMCO 3.0.0-rc.3 include:

Updates to speed up HEMCO
Updates to calculate emissions sensitivities, apply emissions scaling factors, and output adjoint diagnostics
Support for GCAP 2.0
Unify HCOIO interfaces for standard and MAPL configurations
Updates for using HEMCO in CESM2-GC and WRF-GC

Please see the following links for more information on this version.

Overview

HEMCO 3.0.0 milestone

Documentation

HEMCO User's Guide

- Fortran
Published by msulprizio over 4 years ago

hemco - HEMCO 3.0.0-rc.3

HEMCO 3.0.0-rc.3 12 Apr 2021

This release candidate fixes the following bugs discovered since 3.0.0-rc.2:

Met fields were only being read in once at the start of the simulation
- As was originally reported in Issue https://github.com/geoschem/geos-chem/issues/686

- Fortran
Published by yantosca almost 5 years ago

hemco - HEMCO 3.0.0-rc.2

HEMCO 3.0.0-rc.2 23 Mar 2021

This release candidate fixes the following issue identified since 3.0.0-rc.1:

Remove duplicate Inst%FLUXSABI allocation in MEGAN HCO extension
Make sure data containers with the "EFY" time cycle flag are only updated once

- Fortran
Published by msulprizio almost 5 years ago

hemco - HEMCO 3.0.0-rc.1

HEMCO 3.0.0-rc.1 18 Mar 2021

This release candidate fixes the following issue identified since 3.0.0-rc.0:

Use HcoState%NZ instead of NLEV in hcointerpmod.F90
Set and update ExtState before computing emissions in HEMCO standalone
Add stale bot and no-response bot
Update isCoards script to account for files saved out by GCHP's History component
Remove hard-coded scale factors from DustDead extension (set in HEMCO_Config.rc instead)

- Fortran
Published by msulprizio almost 5 years ago

hemco - HEMCO 3.0.0-rc.0

HEMCO 3.0.0-rc.0 08 Jan 2021

This is the first release candidate for HEMCO 3.0.0. Major updates since HEMCO 2.2.0 include.

The HEMCO source code has been split off from the GEOS-Chem repository into this new repository
The source code has been reorganized
- A script for creating HEMCO standalone run directories can now be found in the run/ subdirectory
- Several driver programs have been added to the src/Interfaces/ subdirectory for using HEMCO in other models
CMake is the default build system; Support for GNU Make has been retired
Carbon based units for VOC species have been removed
CEDS GDB-MAPS is now the default anthropogenic emissions inventory

Please see the following links for more information on this version.

Overview

HEMCO 3.0.0 milestone

Documentation

HEMCO User's Guide

- Fortran
Published by msulprizio about 5 years ago

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