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octofitter.jl

Octofitter is a Julia package for performing Bayesian inference against a wide variety of exoplanet and binary star data.

https://github.com/sefffal/octofitter.jl

Science Score: 57.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 8 DOI reference(s) in README
  • ○
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  • ○
    Scientific vocabulary similarity
    Low similarity (10.8%) to scientific vocabulary

Keywords

julia
Last synced: 6 months ago · JSON representation ·

Repository

Octofitter is a Julia package for performing Bayesian inference against a wide variety of exoplanet and binary star data.

Basic Info
Statistics
  • Stars: 43
  • Watchers: 2
  • Forks: 3
  • Open Issues: 17
  • Releases: 22
Topics
julia
Created almost 5 years ago · Last pushed 6 months ago
Metadata Files
Readme License Citation

README.md

Octofitter.jl

Octofitter is a Julia package for performing Bayesian inference against a wide variety of exoplanet / binary star data. You can also use Octofitter from Python using octofitterpy.

Read the tutorials and documentation here.

Read the paper

In addition to these documentation and tutorial pages, you can read the paper published in the Astronomical Journal (open-access).

Attribution

  • If you use Octofitter in your work, please cite Thompson et al
  • If you use any of the plots, please consider citing the plotting library Makie.jl Danisch & Krumbiegel, (2021).
  • If you use Gaia parallaxes in your work, please cite Gaia DR3 Gaia Collaboration et al. 2023
  • If you use Hipparcos-GAIA proper motion anomaly, please cite Brandt 2021
  • If you use example data in one of the tutorials, please cite the sources listed Brandt 2021
  • If you use one of the included functions for automatically retreiving data from a public dataset, eg HARPS RVBank, please cite the source as appropriate.
  • If you adopt the O'Neil et al. 2019 observable based priors, please cite O'Neil et al. 2019.
  • Please also consider citing the HMC sampler backend, Xu et al 2020
  • If you use the corner plot functionality, please cite: @misc{Thompson2023, author = {William Thompson}, title = {{PairPlots.jl} Beautiful and flexible visualizations of high dimensional data}, year = {2023}, howpublished = {\url{https://sefffal.github.io/PairPlots.jl/dev}}, }

Ready?

For instructions, see the documentation page:

Owner

  • Name: William Thompson
  • Login: sefffal
  • Kind: user
  • Location: Victoria, British Columbia

Citation (CITATION.md) 

# Citing

To cite octofitterpy or Octiftter.jl, please use the following BibTeX entry:

```bibtex
@article{Thompson_2023,
    doi = {10.3847/1538-3881/acf5cc},
    url = {https://dx.doi.org/10.3847/1538-3881/acf5cc},
    year = {2023},
    month = {sep},
    publisher = {The American Astronomical Society},
    volume = {166},
    number = {4},
    pages = {164},
    author = {William Thompson and Jensen Lawrence and Dori Blakely and Christian Marois and Jason Wang and Mosé Giordano and Timothy Brandt and Doug Johnstone and Jean-Baptiste Ruffio and S. Mark Ammons and Katie A. Crotts and Clarissa R. Do Ó and Eileen C. Gonzales and Malena Rice},
    title = {Octofitter: Fast, Flexible, and Accurate Orbit Modeling to Detect Exoplanets},
    journal = {The Astronomical Journal},
}
```


* If you use Gaia parallaxes in your work, please cite Gaia DR3 [Gaia Collaboration et al. 2023](https://ui.adsabs.harvard.edu/abs/2023A&A...674A...1G)
* Please cite the HMC sampler backend if you use `octofit`: [Xu et al 2020](http://proceedings.mlr.press/v118/xu20a.html)
* Please cite the [Pigeons paper](https://arxiv.org/abs/2308.09769) if you use `octofit_pigeons`.
* If you use Hipparcos-GAIA proper motion anomaly, please cite [Brandt 2021](https://ui.adsabs.harvard.edu/abs/2021ApJS..254...42B)
* If you use example data in one of the tutorials, please cite the sources listed
* If you use one of the included functions for automatically retreiving data from a public dataset, eg HARPS RVBank, please cite the source as appropriate (it will be displayed in the terminal)
* If you adopt the O'Neil et al. 2019 observable based priors, please cite [O'Neil et al. 2019](https://ui.adsabs.harvard.edu/abs/2019AJ....158....4O).
* If you use RV phase folded plot, please consider citing Makie.jl [Danisch & Krumbiegel, (2021).](https://doi.org/10.21105/joss.03349)
* If you use the pairplot/cornerplot functionality, please cite:
```bibtex
@misc{Thompson2023,
  author = {William Thompson},
  title = {{PairPlots.jl} Beautiful and flexible visualizations of high dimensional data},
  year = {2023},
  howpublished = {\url{https://sefffal.github.io/PairPlots.jl/dev}},
}
```

GitHub Events

Total
  • Create event: 22
  • Commit comment event: 32
  • Release event: 5
  • Issues event: 25
  • Watch event: 12
  • Issue comment event: 66
  • Push event: 326
  • Pull request event: 29
  • Fork event: 1
Last Year
  • Create event: 22
  • Commit comment event: 32
  • Release event: 5
  • Issues event: 25
  • Watch event: 12
  • Issue comment event: 66
  • Push event: 326
  • Pull request event: 29
  • Fork event: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 32
  • Total pull requests: 58
  • Average time to close issues: 5 months
  • Average time to close pull requests: about 2 months
  • Total issue authors: 13
  • Total pull request authors: 4
  • Average comments per issue: 3.75
  • Average comments per pull request: 0.02
  • Merged pull requests: 24
  • Bot issues: 0
  • Bot pull requests: 51
Past Year
  • Issues: 16
  • Pull requests: 36
  • Average time to close issues: 10 days
  • Average time to close pull requests: 3 months
  • Issue authors: 9
  • Pull request authors: 3
  • Average comments per issue: 3.13
  • Average comments per pull request: 0.0
  • Merged pull requests: 12
  • Bot issues: 0
  • Bot pull requests: 32
View more stats
Top Authors
Issue Authors
  • sefffal (15)
  • sealauren (3)
  • Bhavesh012 (3)
  • mtagliavia (2)
  • gotten (1)
  • jvanzand (1)
  • langfzac (1)
  • mkenworthy (1)
  • krose098 (1)
  • evanlfitz (1)
  • JuliaTagBot (1)
  • zjwhale (1)
  • AlessioPop (1)
Pull Request Authors
  • github-actions[bot] (72)
  • sefffal (6)
  • langfzac (2)
  • afogal402 (1)
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Dependencies

.github/workflows/docs.yml actions
  • actions/cache v1 composite
  • actions/checkout v2 composite
  • julia-actions/setup-julia latest composite
.github/workflows/CompatHelper.yml actions
  • julia-actions/setup-julia v1 composite
.github/workflows/TagBot.yml actions
  • JuliaRegistries/TagBot v1 composite