Recent Releases of optimized_antsmultivariatetemplateconstruction
optimized_antsmultivariatetemplateconstruction - v1.0
What's Changed
- Add --block option for blocking job submission by @Gab-D-G in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/6
- nlin-only stage should initialize with prior stage affine if available by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/19
- Implement custom iteration numbers for stages by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/18
- Add center-of-mass initialization of template by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/20
- Remove repeat application of COM alignment, doesn't improve things by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/23
- Remove debug exit by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/24
- Add ability to specify resolution of starting average by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/25
- Improve informational outputs and logging by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/26
- Further logging improvement by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/28
- Add ability to specify a gradient step schedule by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/29
- Implement DBM by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/31
- Implement twolevel wrapper around modelbuild.sh by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/39
- Wrote new python script to compute averages from a set of images to r… by @Gab-D-G in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/45
- Implement python-based averaging by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/49
- Implement transform interpolation and averaging using proper Lie Group Algebra by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/54
- Initial implementation of volgenmodel by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/60
- Resampling to common space by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/65
- Fix empty lists in old bash by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/82
- Add feature to manually specify registration pyramid by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/83
- Implement dependent submodule by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/86
- Properly implement passing down masks in twolevel modelbuild by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/85
- Welford optimization by @RyanHaniff in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/90
- timeseries and warp fix by @RyanHaniff in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/93
- Add starting target to twolevel by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/98
- Update README.md by @hfxcarl in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/101
- Add commonspace to subjectspace resampling by @jeremie-fouquet in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/100
- Relocate jobs and logfiles for dbm vs modelbuild by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/102
- Improve starting by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/103
- Add option to control starting average method independent of ongoing method by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/108
- Cleanups and small bug fix for #91 by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/109
New Contributors
- @Gab-D-G made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/6
- @gdevenyi made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/19
- @RyanHaniff made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/90
- @hfxcarl made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/101
- @jeremie-fouquet made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/100
Full Changelog: https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/commits/v1.0
- Shell
Published by gdevenyi over 1 year ago
optimized_antsmultivariatetemplateconstruction - 1.0
What's Changed
- Add --block option for blocking job submission by @Gab-D-G in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/6
- nlin-only stage should initialize with prior stage affine if available by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/19
- Implement custom iteration numbers for stages by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/18
- Add center-of-mass initialization of template by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/20
- Remove repeat application of COM alignment, doesn't improve things by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/23
- Remove debug exit by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/24
- Add ability to specify resolution of starting average by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/25
- Improve informational outputs and logging by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/26
- Further logging improvement by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/28
- Add ability to specify a gradient step schedule by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/29
- Implement DBM by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/31
- Implement twolevel wrapper around modelbuild.sh by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/39
- Wrote new python script to compute averages from a set of images to r… by @Gab-D-G in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/45
- Implement python-based averaging by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/49
- Implement transform interpolation and averaging using proper Lie Group Algebra by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/54
- Initial implementation of volgenmodel by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/60
- Resampling to common space by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/65
- Fix empty lists in old bash by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/82
- Add feature to manually specify registration pyramid by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/83
- Implement dependent submodule by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/86
- Properly implement passing down masks in twolevel modelbuild by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/85
- Welford optimization by @RyanHaniff in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/90
- timeseries and warp fix by @RyanHaniff in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/93
- Add starting target to twolevel by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/98
- Update README.md by @hfxcarl in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/101
- Add commonspace to subjectspace resampling by @jeremie-fouquet in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/100
- Relocate jobs and logfiles for dbm vs modelbuild by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/102
- Improve starting by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/103
- Add option to control starting average method independent of ongoing method by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/108
- Cleanups and small bug fix for #91 by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/109
New Contributors
- @Gab-D-G made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/6
- @gdevenyi made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/19
- @RyanHaniff made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/90
- @hfxcarl made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/101
- @jeremie-fouquet made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/100
Full Changelog: https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/commits/1.0
- Shell
Published by gdevenyi over 1 year ago
optimized_antsmultivariatetemplateconstruction - v1.0
What's Changed
- Add --block option for blocking job submission by @Gab-D-G in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/6
- nlin-only stage should initialize with prior stage affine if available by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/19
- Implement custom iteration numbers for stages by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/18
- Add center-of-mass initialization of template by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/20
- Remove repeat application of COM alignment, doesn't improve things by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/23
- Remove debug exit by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/24
- Add ability to specify resolution of starting average by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/25
- Improve informational outputs and logging by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/26
- Further logging improvement by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/28
- Add ability to specify a gradient step schedule by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/29
- Implement DBM by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/31
- Implement twolevel wrapper around modelbuild.sh by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/39
- Wrote new python script to compute averages from a set of images to r… by @Gab-D-G in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/45
- Implement python-based averaging by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/49
- Implement transform interpolation and averaging using proper Lie Group Algebra by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/54
- Initial implementation of volgenmodel by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/60
- Resampling to common space by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/65
- Fix empty lists in old bash by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/82
- Add feature to manually specify registration pyramid by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/83
- Implement dependent submodule by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/86
- Properly implement passing down masks in twolevel modelbuild by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/85
- Welford optimization by @RyanHaniff in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/90
- timeseries and warp fix by @RyanHaniff in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/93
- Add starting target to twolevel by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/98
- Update README.md by @hfxcarl in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/101
- Add commonspace to subjectspace resampling by @jeremie-fouquet in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/100
- Relocate jobs and logfiles for dbm vs modelbuild by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/102
- Improve starting by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/103
- Add option to control starting average method independent of ongoing method by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/108
- Cleanups and small bug fix for #91 by @gdevenyi in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/109
New Contributors
- @Gab-D-G made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/6
- @gdevenyi made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/19
- @RyanHaniff made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/90
- @hfxcarl made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/101
- @jeremie-fouquet made their first contribution in https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/pull/100
Full Changelog: https://github.com/CoBrALab/optimized_antsMultivariateTemplateConstruction/commits/v1.0
- Shell
Published by gdevenyi over 1 year ago