Releases | Open Source Science

DiffEqParamEstim - v2.2.0

DiffEqParamEstim v2.2.0

Merged pull requests: - Change typeof(x) <: y to x isa y (#228) (@pepijndevos) - typos CI (#230) (@ArnoStrouwen) - Bump actions/checkout from 3 to 4 (#231) (@dependabot[bot]) - CompatHelper: bump compat for RecursiveArrayTools to 3, (keep existing compat) (#232) (@github-actions[bot]) - CompatHelper: bump compat for RecursiveArrayTools to 3 for package docs, (keep existing compat) (#233) (@github-actions[bot]) - CompatHelper: bump compat for OptimizationMOI to 0.2 for package docs, (keep existing compat) (#234) (@github-actions[bot]) - CompatHelper: bump compat for OptimizationNLopt to 0.2 for package docs, (keep existing compat) (#236) (@github-actions[bot]) - CompatHelper: bump compat for OptimizationOptimJL to 0.2 for package docs, (keep existing compat) (#237) (@github-actions[bot]) - CompatHelper: bump compat for OptimizationBBO to 0.2 for package docs, (keep existing compat) (#238) (@github-actions[bot]) - CompatHelper: bump compat for OptimizationMOI to 0.3 for package docs, (keep existing compat) (#239) (@github-actions[bot]) - Bump crate-ci/typos from 1.16.23 to 1.17.1 (#241) (@dependabot[bot]) - Bump actions/cache from 3 to 4 (#242) (@dependabot[bot])

- Julia
Published by github-actions[bot] about 2 years ago

DiffEqParamEstim - v2.1.0

DiffEqParamEstim v2.1.0

Diff since v2.0.1

Merged pull requests: - [skip ci] LanguageTool (#210) (@ArnoStrouwen) - format markdown (#211) (@ArnoStrouwen) - Print out parameter values in first differencing run in SDE fitting tutorial (#213) (@Vaibhavdixit02) - enable dependabot for GitHub actions (#214) (@ranocha) - Bump codecov/codecov-action from 1 to 3 (#215) (@dependabot[bot]) - Bump actions/checkout from 1 to 3 (#216) (@dependabot[bot]) - Bump actions/cache from 1 to 3 (#217) (@dependabot[bot]) - Bump actions/checkout from 3 to 4 (#222) (@dependabot[bot]) - Documenter 1.0 upgrade (#224) (@ArnoStrouwen) - CompatHelper: bump compat for SciMLBase to 2, (keep existing compat) (#226) (@github-actions[bot]) - CompatHelper: bump compat for NLopt to 1 for package docs, (keep existing compat) (#227) (@github-actions[bot])

Closed issues: - Tutorial missing output-Parameter Estimation for Stochastic Differential Equations and Ensembles (#212) - Build loss function for ensemble of ODE's, but with different sampling times for each simulation in the ensemble (#218) - Fit a model on incomplete data (#219) - CI not running (#225)

- Julia
Published by github-actions[bot] over 2 years ago

DiffEqParamEstim - v2.0.1

DiffEqParamEstim v2.0.1

Diff since v2.0.0

- Julia
Published by github-actions[bot] about 3 years ago

DiffEqParamEstim - v2.0.0

DiffEqParamEstim v2.0.0

Diff since v1.28.0

Closed issues: - Redesign cost functions for a more general interface (#78) - Making DiffEqParamEstim.jl more friendly for first time users (#110) - Update docs: "Using JuMP with DiffEqParamEstim" (#187)

Merged pull requests: - reproducible docs (#185) (@ArnoStrouwen) - [skip ci] doc compat (#186) (@ArnoStrouwen) - Add ensemble tutorial and update to start building first ODE example (#188) (@ChrisRackauckas) - CompatHelper: add new compat entry for Plots at version 1 for package docs, (keep existing compat) (#190) (@github-actions[bot]) - CompatHelper: add new compat entry for RecursiveArrayTools at version 2 for package docs, (keep existing compat) (#191) (@github-actions[bot]) - CompatHelper: add new compat entry for Optim at version 1 for package docs, (keep existing compat) (#192) (@github-actions[bot]) - CompatHelper: add new compat entry for LeastSquaresOptim at version 0.8 for package docs, (keep existing compat) (#193) (@github-actions[bot]) - CompatHelper: add new compat entry for BlackBoxOptim at version 0.6 for package docs, (keep existing compat) (#194) (@github-actions[bot]) - CompatHelper: add new compat entry for DifferentialEquations at version 7 for package docs, (keep existing compat) (#195) (@github-actions[bot]) - Refactor code to make it Optimization.jl compatible (#196) (@Vaibhavdixit02) - Backwards compatibility functions (#198) (@ChrisRackauckas) - Update docs (#199) (@Vaibhavdixit02) - CompatHelper: add new compat entry for SciMLSensitivity at version 7 for package docs, (keep existing compat) (#200) (@github-actions[bot]) - CompatHelper: add new compat entry for Distributions at version 0.25 for package docs, (keep existing compat) (#201) (@github-actions[bot]) - CompatHelper: add new compat entry for NLopt at version 0.6 for package docs, (keep existing compat) (#202) (@github-actions[bot]) - CompatHelper: add new compat entry for OptimizationMOI at version 0.1 for package docs, (keep existing compat) (#203) (@github-actions[bot]) - CompatHelper: add new compat entry for ForwardDiff at version 0.10 for package docs, (keep existing compat) (#204) (@github-actions[bot]) - CompatHelper: add new compat entry for OptimizationBBO at version 0.1 for package docs, (keep existing compat) (#205) (@github-actions[bot]) - CompatHelper: add new compat entry for Zygote at version 0.6 for package docs, (keep existing compat) (#206) (@github-actions[bot]) - CompatHelper: add new compat entry for OptimizationOptimJL at version 0.1 for package docs, (keep existing compat) (#207) (@github-actions[bot]) - CompatHelper: add new compat entry for OptimizationNLopt at version 0.1 for package docs, (keep existing compat) (#208) (@github-actions[bot]) - CompatHelper: add new compat entry for Optimization at version 3 for package docs, (keep existing compat) (#209) (@github-actions[bot])

- Julia
Published by github-actions[bot] about 3 years ago

DiffEqParamEstim - v1.28.0

DiffEqParamEstim v1.28.0

Diff since v1.27.0

Closed issues: - L2Loss always returns Inf (#183)

Merged pull requests: - fix canon link (#182) (@ArnoStrouwen) - update retcode handling (#184) (@ChrisRackauckas)

- Julia
Published by github-actions[bot] over 3 years ago

DiffEqParamEstim - v1.27.0

DiffEqParamEstim v1.27.0

Diff since v1.26.0

Merged pull requests: - badges (#174) (@ArnoStrouwen) - doc cov (#175) (@ArnoStrouwen) - MassInstallAction: Install the Invalidations workflow on this repository (#176) (@devmotion) - Title SEO (#178) (@ArnoStrouwen) - remove sqrt in losses (#179) (@ArnoStrouwen) - canonize docs (#181) (@ArnoStrouwen)

- Julia
Published by github-actions[bot] over 3 years ago

DiffEqParamEstim - v1.26.0

DiffEqParamEstim v1.26.0

Diff since v1.25.0

Merged pull requests: - Change SciMLProblem to AbstractSciMLProblem (#172) (@Song921012)

- Julia
Published by github-actions[bot] over 3 years ago

DiffEqParamEstim - v1.25.0

DiffEqParamEstim v1.25.0

Diff since v1.24.0

Merged pull requests: - update for SciMLSensitivity (#171) (@ChrisRackauckas)

- Julia
Published by github-actions[bot] over 3 years ago

DiffEqParamEstim - v1.24.0

DiffEqParamEstim v1.24.0

Diff since v1.23.1

Merged pull requests: - format to SciML Style (#169) (@ChrisRackauckas) - CompatHelper: bump compat for PreallocationTools to 0.4, (keep existing compat) (#170) (@github-actions[bot])

- Julia
Published by github-actions[bot] over 3 years ago

DiffEqParamEstim - v1.23.1

DiffEqParamEstim v1.23.1

Diff since v1.23.0

Merged pull requests: - CompatHelper: bump compat for PreallocationTools to 0.3, (keep existing compat) (#167) (@github-actions[bot]) - CompatHelper: bump compat for PenaltyFunctions to 0.3, (keep existing compat) (#168) (@github-actions[bot])

- Julia
Published by github-actions[bot] over 3 years ago

DiffEqParamEstim - v1.23.0

DiffEqParamEstim v1.23.0

Diff since v1.22.0

Closed issues: - Distributions >= 0.25? (#163)

Merged pull requests: - up compat for Distributions.jl to include 0.25 (#164) (@biona001) - CI for LTS (#165) (@ChrisRackauckas)

- Julia
Published by github-actions[bot] about 4 years ago

DiffEqParamEstim - v1.22.0

DiffEqParamEstim v1.22.0

Diff since v1.21.0

Closed issues: - Register (#113) - Specify variable to calculate loss on (#160)

Merged pull requests: - Update ODE_inference.md (#161) (@fabern) - Directly use PreallocationTools.jl (#162) (@ChrisRackauckas)

- Julia
Published by github-actions[bot] over 4 years ago

DiffEqParamEstim - v1.21.0

DiffEqParamEstim v1.21.0

Diff since v1.20.1

Closed issues: - Precompilation fails with qualified EnsembleProblem error (#159)

- Julia
Published by github-actions[bot] over 4 years ago

DiffEqParamEstim - v1.20.1

DiffEqParamEstim v1.20.1

Diff since v1.20.0

Closed issues: - Parameter estimation with one data point (#149) - Wrong LogLikeLoss function ? (#156)

Merged pull requests: - Fix loglikelihood iterations (#158) (@ChrisRackauckas)

- Julia
Published by github-actions[bot] about 5 years ago

DiffEqParamEstim - v1.20.0

DiffEqParamEstim v1.20.0

Diff since v1.19.1

Closed issues: - MAP estimate doesn't take priors into account? (#153)

Merged pull requests: - don't skip the first point (#157) (@ChrisRackauckas)

- Julia
Published by github-actions[bot] about 5 years ago

DiffEqParamEstim - v1.19.1

DiffEqParamEstim v1.19.1

Diff since v1.19.0

Merged pull requests: - split apart the docs to bitesized chunks (#154) (@ChrisRackauckas) - Rename prior arg to priors (#155) (@Vaibhavdixit02)

- Julia
Published by github-actions[bot] about 5 years ago

DiffEqParamEstim - v1.19.0

DiffEqParamEstim v1.19.0

Diff since v1.18.1

Merged pull requests: - Fix check of return code (#143) (@devmotion) - Create index.md (#144) (@mkg33) - MassInstallAction: Install the TagBot workflow on this repository (#145) (@christopher-dG) - Update index.md (#146) (@mkg33) - Update docs (#147) (@mkg33) - Update ODE_inference.md (#148) (@mkg33) - MassInstallAction: Install the GitHubActionsCI workflow on this repository (#150) (@christopher-dG) - CompatHelper: bump compat for "LsqFit" to "0.12" (#151) (@github-actions[bot])

- Julia
Published by github-actions[bot] about 5 years ago