speed-hpc - v7.4

Major changes

• General fixes and improvements to the manual, images, logos, FAQ (@salhanyf)
• Update VSCode usage examples and scripts (@salhanyf)
• Update Jupyter notebook example scripts (@smokhov)
• Add Concordia Virtual Tour++ reference from students (@smokhov)
• Arrange MATLAB, Jupyter, poppler examples files in folders (@salhanyf, @smokhov)
• Adapt Slurm Job Script Generator HTML page to Speed (@carlos-encs, @smokhov)
• Regenerate software list (@smokhov)

PRs

• [manual][FAQ] add management of /tmp storage use cases by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/59
• add Slurm Job Generator by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/60, https://github.com/NAG-DevOps/speed-hpc/pull/61, and https://github.com/NAG-DevOps/speed-hpc/pull/62
• change poppler.txt into a complete runnable example by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/63
• add VSCode instructions (web-based and local version) by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/64
• add Concordia branding and update images/figures by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/65
• [manual] add job script generator section to the manual by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/66

Full Changelog: https://github.com/NAG-DevOps/speed-hpc/compare/7.3...7.4

- Jupyter Notebook
Published by smokhov 9 months ago

speed-hpc - v7.3

Major changes: - General fixes and improvements to the manual (@salhanyf, @smokhov). - Update the job parameters in section 2 (@salhanyf). - Add env.sh instead of tcsh.sh as a job script example, since it's used in workshops (section 2.3) (@salhanyf) - Update OpenISS-reid and OpenISS-yolov3 projects (@salhanyf) - Adding MultiMIGs example (@carlos-encs) - Update the process of using JupyterLab on Speed (@Pauljanson002 @salhanyf @smokhov) - Switch fluent example to use ansys/2023R2/default (@smokhov) - Regenerate software list

What's Changed (PRs)

• Add new script for jupyter launch by @Pauljanson002 in https://github.com/NAG-DevOps/speed-hpc/pull/53
• Update jupyterlab readme by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/54
• Updating README and OpenISS script by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/55
• Add example: One Job-MultiMIGs by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/56
• OpenISS Yolov3 Update by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/57
• Manual release 7.3 updates by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/58

New Contributors

• @Pauljanson002 made their first contribution in https://github.com/NAG-DevOps/speed-hpc/pull/53

Full Changelog: https://github.com/NAG-DevOps/speed-hpc/compare/7.2...7.3

- Jupyter Notebook
Published by salhanyf about 1 year ago

speed-hpc - v7.2

Documentation:

• make use of anaconda3/2023.03/default in all our docs and examples as it is present in both el9 and el7 nodes (@smokhov)
• add a TOC to src/README for examples (@smokhov)
• general fixes and typos (@salhanyf, @yulgroper, @smokhov)
• add a link to Diviner Tools (by Chantelle Dubois) as an example (@smokhov)
• multi-node multi-GPU documentation (@carlos-encs)
• EL7 and EL9 software list (@smokhov)
• refs updates (@smokhov and @yulgroper)
• full Speed architecture (@smokhov)
• requesting access updates (@smokhov)
• --mail-type and seff updates (@yulgroper and @carlos-encs)

Examples:

• add a poppler-based example for image/PDF conversions (@carlos-encs)
• add a multi-node OpenFOAM example (@carlos-encs)
• add a shortcut Jupyter script and a lot of other Jupyter-related examples (@carlos-encs)
• update COMSOL example per FAQ (@smokhov)
• multi-node multi-GPU examples using for pytorch (@carlos-encs)
• MATLAB (@salhanyf)
• OpenFOAM (@carlos-encs)

What's Changed Details

• Multi-GPU, Multi-node training by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/35
• Jupyter-notebooks script and instructions by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/36
  • Jupyter: tunnel and examples - updated by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/39
  • jupyter labs no container scripts. by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/47
  • JupyterLabs in Conda+Pytorch by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/44
  • jupyter conda+pytorch, no singularity: web version by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/45
  • Juyterlabs venv - added to the manual by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/48
• Adding matlab-example by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/46
• OpenFOAM example by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/37
• Poppler example: interactive job by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/38
• No space left error - conda environment by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/40
• Vscode : added to pdf and html by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/41
• Fix: Typos in manual by @aaanh in https://github.com/NAG-DevOps/speed-hpc/pull/42
• seff added by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/43
• Conda Variables: github, pdf, web by @carlos-encs in https://github.com/NAG-DevOps/speed-hpc/pull/49
• openiss-reid-speed is set for speed with some updates to the README by @salhanyf in https://github.com/NAG-DevOps/speed-hpc/pull/50
• Refactor pytorch-multicpu to be use-ready in a subdirectory by @smokhov in https://github.com/NAG-DevOps/speed-hpc/pull/51
• Manual updates for 7.2 by @salhanyf and @smokhov in https://github.com/NAG-DevOps/speed-hpc/pull/52

Full Changelog: https://github.com/NAG-DevOps/speed-hpc/compare/7.1...7.2

- Jupyter Notebook
Published by smokhov over 1 year ago

speed-hpc - v7.1

Major changes:

• introduce Jupyter Notebooks section (@carlos-encs)
• document Python virtual environments more in detail (@carlos-encs)
• make sure --mem usage is mandatory (@carlos-encs)
• replace $USER usage in $SBATCH comments (@carlos-encs)
• improve clarity of language (@yulgroper. @smokhov)
• update the list of sister facilities (@smokhov)
• add a multi-CPU training example for PyTorch (@carlos-encs)
• general fixes (@smokhov, @yulgroper)

- Jupyter Notebook
Published by smokhov about 2 years ago

speed-hpc - v7.0

Major changes:

• switch from GE to SLURM
  • update manual
  • update examples
• more on Speed architecture
• more use cases

- Jupyter Notebook
Published by smokhov over 2 years ago

speed-hpc - v6.6 final GE

The last full release covering Grid Engine (GE) examples.

• Added OpenISS job examples
  • OpenISS YOLOv3 (@tariqghd)
  • OpenISS REID (@carlos-encs)
• Singularity section added (@smokhov)
• More FAQ updates (@yulgroper)
• More sister facilities (@smokhov)
• Add more published related work (@smokhov)
• General editing/proofreading (@yulgroper, @smokhov)

- Jupyter Notebook
Published by smokhov over 2 years ago

speed-hpc - v6.6-dev-07 snapshot

• Update docker-compose to use local Dockerfile
• Install make tools on container startup
• Improve .devcontainer README
• Corrected LaTeX formatting errors in FAQs
• Typos

- Jupyter Notebook
Published by yulgroper almost 3 years ago

speed-hpc - v6.6-dev-06 snapshot

• typos
• emphasis on sections on what Speed is and is not
• language and style

- Jupyter Notebook
Published by smokhov about 3 years ago

speed-hpc - v6.6-dev-05 snapshot

- Jupyter Notebook
Published by smokhov about 3 years ago

speed-hpc - v6.5

Updates to new users and GPU, access, examples and use cases.

- Jupyter Notebook
Published by smokhov over 4 years ago