DiscreteEntropy.jl

DiscreteEntropy.jl: Entropy Estimation of Discrete Random Variables with Julia - Published in JOSS (2024)

https://github.com/kellino/discreteentropy.jl

Science Score: 93.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
    Found 7 DOI reference(s) in README and JOSS metadata
  • Academic publication links
    Links to: joss.theoj.org
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
    Published in Journal of Open Source Software
Last synced: 6 months ago · JSON representation

Repository

Estimation of Shannon Entropy for Discrete Random Variables

Basic Info
  • Host: GitHub
  • Owner: kellino
  • License: mit
  • Language: Julia
  • Default Branch: main
  • Homepage:
  • Size: 2.72 MB
Statistics
  • Stars: 6
  • Watchers: 3
  • Forks: 2
  • Open Issues: 0
  • Releases: 4
Created about 3 years ago · Last pushed 9 months ago
Metadata Files
Readme Changelog Contributing License Authors

README.md

DiscreteEntropy.jl

Build Status Coverage License DOI

DiscreteEntropy is a Julia package to estimate the Shannon entropy of discrete random variables. It contains implementations of many popular entropy estimators, such as Chao-Shen, NSB, Miller-Madow and various Bayesian estimators. Moreoever, it also contains functions for estimating cross entropy, KL divergence, mutual information, conditional information, Theil's U and other entropy measures. It supports Jackknife and Bayesian Bootstrap resampling for data poor estimation.

For more information, see the documentation.

Quick Example

julia> using DiscreteEntropy julia> data = [1,2,3,4,3,2,1]; julia> h = estimate_h(from_data(data, Histogram), ChaoShen) julia> 2.0775715569320012

Contributing and Bugs

Please see CONTRIBUTING.md for details on how to contribute to the project through pull requests or issues.

CITATION

If you have found DiscreteEntropy.jl useful, or used it in your work, please consider citing it:

@article{Kelly2024, doi = {10.21105/joss.07334}, url = {https://doi.org/10.21105/joss.07334}, year = {2024}, publisher = {The Open Journal}, volume = {9}, number = {103}, pages = {7334}, author = {David A. Kelly and Ilaria Pia La Torre}, title = {DiscreteEntropy.jl: Entropy Estimation of Discrete Random Variables with Julia}, journal = {Journal of Open Source Software} }

Owner

  • Name: David Kelly
  • Login: kellino
  • Kind: user
  • Location: London, UK

Typographer, Sculptor, Programmer

JOSS Publication

DiscreteEntropy.jl: Entropy Estimation of Discrete Random Variables with Julia
Published
November 12, 2024
Volume 9, Issue 103, Page 7334
Authors
David A. Kelly ORCID
King's College London, UK
Ilaria Pia La Torre ORCID
University College London, UK
Editor
Nikoleta Glynatsi ORCID
Tags
julia discrete entropy estimation information theory mutual information

GitHub Events

Total
  • Create event: 2
  • Commit comment event: 1
  • Release event: 2
  • Issues event: 7
  • Watch event: 4
  • Delete event: 1
  • Issue comment event: 30
  • Push event: 48
  • Pull request event: 7
  • Fork event: 4
Last Year
  • Create event: 2
  • Commit comment event: 1
  • Release event: 2
  • Issues event: 7
  • Watch event: 4
  • Delete event: 1
  • Issue comment event: 30
  • Push event: 48
  • Pull request event: 7
  • Fork event: 4

Committers

Last synced: 7 months ago

All Time
  • Total Commits: 323
  • Total Committers: 4
  • Avg Commits per committer: 80.75
  • Development Distribution Score (DDS): 0.105
Past Year
  • Commits: 72
  • Committers: 2
  • Avg Commits per committer: 36.0
  • Development Distribution Score (DDS): 0.069
Top Committers
Name Email Commits
David Kelly d****o@g****m 289
IlariaLaTorre l****a@l****t 24
Nils Luettschwager n****s@g****e 5
CompatHelper Julia c****y@j****g 5
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 8
  • Total pull requests: 11
  • Average time to close issues: 3 days
  • Average time to close pull requests: about 15 hours
  • Total issue authors: 3
  • Total pull request authors: 4
  • Average comments per issue: 5.5
  • Average comments per pull request: 0.45
  • Merged pull requests: 9
  • Bot issues: 0
  • Bot pull requests: 7
Past Year
  • Issues: 6
  • Pull requests: 4
  • Average time to close issues: 3 days
  • Average time to close pull requests: about 5 hours
  • Issue authors: 2
  • Pull request authors: 3
  • Average comments per issue: 5.67
  • Average comments per pull request: 1.25
  • Merged pull requests: 4
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • nluetts (4)
  • kellino (3)
  • JuliaTagBot (1)
Pull Request Authors
  • github-actions[bot] (13)
  • danielskatz (4)
  • nluetts (2)
  • Nikoleta-v3 (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • julia 1 total
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 3
juliahub.com: DiscreteEntropy

Estimation of Shannon Entropy for Discrete Random Variables

  • Versions: 3
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 1 Total
Rankings
Dependent repos count: 9.6%
Average: 24.1%
Dependent packages count: 38.6%
Last synced: 6 months ago

Dependencies

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