siibra-api

https://github.com/fzj-inm1-bda/siibra-api

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
✓
codemeta.json file
Found codemeta.json file
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.zenodo.json file
Found .zenodo.json file
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DOI references
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Academic publication links
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Committers with academic emails
1 of 4 committers (25.0%) from academic institutions
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Institutional organization owner
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (14.5%) to scientific vocabulary

Last synced: 9 months ago · JSON representation

Repository

Basic Info

Host: GitHub
Owner: FZJ-INM1-BDA
License: apache-2.0
Language: Python
Default Branch: master
Size: 1.22 MB

Statistics

Stars: 4
Watchers: 3
Forks: 3
Open Issues: 5
Releases: 245

Created about 5 years ago · Last pushed 9 months ago

Metadata Files

Readme License Codemeta

siibra - API

Authors: Big Data Analytics Group, Institute of Neuroscience and Medicine (INM-1), Forschungszentrum Jülich GmbH

:warning: siibra-api is still at an experimental stage. The API of the library is not stable, and the software is not yet fully tested. You are welcome to install and test it, but be aware that you will likely encounter bugs.

Overview

Siibra-API provides an easy REST access to the siibra-python features.

The main goal is to abstract the python functionalities in a way that they can be used via HTTP and make it more independent and accessible.

Documentation

All of the public endpoints provided by siibra-api are documented by openapi, see swagger redoc.

Development documentations can be found on readthedocs .

Configuration

siibra-api can be configured by:

environment variables, as indicated by the ./api/siibra_api_config.py , or ...
directly overwriting the ./api/siibra_api_config.py file, by overwriting or docker volume mounting

How to contribute

If you want to contribute to siibra-api, feel free to fork it and open a pull request with your changes. You are also welcome to contribute to discussion in the issue tracker and of course to report issues you are facing yourself. If you find the software useful, please reference this repository URL in publications and derived work. You can also star the project to show us that you are using it.

Acknowledgements

This software code is funded from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreement No. 945539 (Human Brain Project SGA3).

Owner

Name: Big Data Analytics group
Login: FZJ-INM1-BDA
Kind: organization
Location: Jülich, Germany

Website: https://www.fz-juelich.de/inm/inm-1/EN/Forschung/Big_Data_Analytics/Big_Data_Analytics_node.html
Repositories: 35
Profile: https://github.com/FZJ-INM1-BDA

Big Data Analytics group at the Institute of Neuroscience and Medicine (INM-1), Forschungszentrum Juelich

CodeMeta (codemeta.json)

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  "type": "SoftwareSourceCode",
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      "givenName": "Xiaoyun"
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      "familyName": "Simsek",
      "givenName": "Ahmet Nihat"
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  "codeRepository": "git+https://github.com/fzj-inm1-bda/siibra-api.git",
  "dateCreated": "2024-08-28",
  "dateModified": "2024-08-28",
  "datePublished": "2021-07-18",
  "description": "Siibra-API provides an easy REST access to the siibra-python features.\n\n The main goal is to abstract the python functionalities in a way that they can be used via HTTP and make it more independent and accessible.",
  "license": "https://spdx.org/licenses/Apache-2.0",
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  "programmingLanguage": [
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  "runtimePlatform": "docker",
  "version": "0.3.28",
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GitHub Events

Total

Create event: 50
Issues event: 1
Release event: 47
Issue comment event: 1
Push event: 57

Last Year

Create event: 50
Issues event: 1
Release event: 47
Issue comment event: 1
Push event: 57

Committers

Last synced: about 1 year ago

All Time

Total Commits: 785
Total Committers: 4
Avg Commits per committer: 196.25
Development Distribution Score (DDS): 0.38

Past Year

Commits: 110
Committers: 1
Avg Commits per committer: 110.0
Development Distribution Score (DDS): 0.0

Top Committers

Name	Email	Commits
Xiao Gui	x**3@g**m	487
Vadim	v**o@g**e	234
vadim	v**o@f**e	62
Ahmet Nihat Simsek	6****k	2

Committer Domains (Top 20 + Academic)

fz-juelich.de: 1 gmx.de: 1

Issues and Pull Requests

Last synced: 9 months ago

All Time

Total issues: 23
Total pull requests: 77
Average time to close issues: 8 months
Average time to close pull requests: 4 days
Total issue authors: 6
Total pull request authors: 2
Average comments per issue: 2.22
Average comments per pull request: 0.31
Merged pull requests: 70
Bot issues: 0
Bot pull requests: 0

Past Year

Issues: 0
Pull requests: 0
Average time to close issues: N/A
Average time to close pull requests: N/A
Issue authors: 0
Pull request authors: 0
Average comments per issue: 0
Average comments per pull request: 0
Merged pull requests: 0
Bot issues: 0
Bot pull requests: 0

View more stats

Top Authors

Issue Authors

marcenko (10)
xgui3783 (7)
valentin-pinkau (3)
dickscheid (3)
fsdavid (1)
KimLothmann (1)

Pull Request Authors

xgui3783 (71)
marcenko (7)

Top Labels

Issue Labels

bug (1) enhancement (1)

Pull Request Labels

Dependencies

Dockerfile docker

python 3.10 build

.github/workflows/docker-img.yml actions

actions/checkout v2 composite

.github/workflows/github-actions.yml actions

actions/checkout v2 composite
actions/setup-python v2 composite

docker-compose-dev.yml docker

redis latest
siibra-api v0.4-all

docker-compose-sw.yml docker

redis latest
siibra-api v0.4-server
siibra-api v0.4-worker

docker-compose.yml docker

redis latest
siibra-api v0.4-all

requirements/all.txt pypi

diskcache *
fastapi *
fastapi-pagination *
fastapi-versioning *
jinja2 *
redis *
requests *
uvicorn *

requirements/docs.txt pypi

mdx_truly_sane_lists *
mkdocs >=1.1,<2
mkdocs-material *

requirements/server.txt pypi

celery ==5.2.6
diskcache *
fastapi *
fastapi-pagination *
fastapi-versioning *
jinja2 *
redis *
requests *
uvicorn *

requirements/siibra.txt pypi

siibra >=0.4a29

requirements/worker.txt pypi

celery ==5.2.6
pydantic *

.github/workflows/deploy-on-okd.yml actions

.github/workflows/ebrains_sync.yml actions

actions/checkout v3 composite
wei/git-sync v3 composite

requirements/partial-all.txt pypi

diskcache *
fastapi *
fastapi-pagination *
fastapi-versioning *
jinja2 *
pydantic <2
redis *
requests *
uvicorn *

requirements/partial-worker.txt pypi

celery ==5.2.6
pydantic <2

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Open Source Science

siibra-api

Science Score: 36.0%

Repository

Basic Info

Statistics

Metadata Files

README.md

siibra - API

Overview

Documentation

Configuration

How to contribute

Acknowledgements

Owner

CodeMeta (codemeta.json)

GitHub Events

Total

Last Year

Committers

All Time

Past Year

Top Committers

Committer Domains (Top 20 + Academic)

Issues and Pull Requests

All Time

Past Year

Top Authors

Issue Authors

Pull Request Authors

Top Labels

Issue Labels

Pull Request Labels

Dependencies