Recent Releases of mcclintock

mcclintock - v.2.0.0

  • McClintock completely re-written into a snakemake-based pipeline
  • Expanded the available TE detection methods
  • Expanded the output files to include VCF, and HTML summary report

- Python
Published by cbergman over 4 years ago

mcclintock - v1.0.0

  • Minor bug fixes in installation and coverage coordinate system
  • Last version of original McClintock system described in Nelson et al (2017)

- Python
Published by cbergman over 4 years ago

mcclintock - v0.2

  • Add coverage module to calculate and plot depth of coverage for all TE families.
  • Use conda for environment dependencies.

- Python
Published by shunhuahan over 6 years ago

mcclintock - v0.1

- Python
Published by cbergman almost 11 years ago