tnt_script - 0.1.7

guoyi.run

• polish: change based on Pablo Goloboff's review comments

• add: citation and cover

- C++
Published by starsareintherose 9 months ago

tnt_script - 0.1.6

guoyi.run

• polish: just add warn to polytomy

- C++
Published by starsareintherose 11 months ago

tnt_script - 0.1.5

guoyi.run

• fix: bremer-related calculation for polytomy

- C++
Published by starsareintherose 11 months ago

tnt_script - 0.1.4

guoyi.run

• add: original svg file

• fix: bremer-related topology

- C++
Published by starsareintherose 11 months ago

tnt_script - 0.1.3

guoyi.run

• polish: handle cases where the denominator is zero.

- C++
Published by starsareintherose 12 months ago

tnt_script - 0.1.2

tnt2figtree

• add: tnt2figtree which can convert the tree(s) generated by export from TNT to the nexus format (FigTree compatible) tree(s).

- C++
Published by starsareintherose about 2 years ago

tnt_script - 0.1.1

guoyi.run

• add: branch swapping after new tech search

- C++
Published by starsareintherose over 2 years ago

tnt_script - 0.1.0

guoyi.run

• add: relative Bremer support

• add: fasta nexus input function

• add: generate winclada.ss file which can be read by winclada directly

• add: use tree vault to save consensus tree during operation

• polish: argument processing function

• polish: Bremer-related can be generated faster via TBR

• polish: sub should be re-adjusted to zero before resample

• polish: resample count change, now rbrs 0.1 brs 0.2 jak 1 boot 2 sym 4.

• polish: errmsg repeat is solved via goto

• fix: OR expression

• fix: search warning

• fix: ntax is the number of taxa minus one, now change to the right number

• orphan: considering the winclada.ss can be read by winclada and it contains a tree and matrix, therefore, tnt2winclada is orphaned now from version 0.1.0.

- C++
Published by starsareintherose over 2 years ago

tnt_script - 0.0.9

guoyi.run

• add: symmetric resmaple (=8), change default resmaple to 8

• fix: empty arguments

- C++
Published by starsareintherose over 2 years ago

tnt_script - 0.0.8

guoyi.run

• add: custom datatype, weighting types, K value, consensus type, resample type and prefix

• polish: search based on ntax and weighting types

- C++
Published by starsareintherose over 2 years ago

tnt_script - 0.0.7

guoyi.run

• fix: jacknifing and bootstrap scores don't map to the consensus tree

• fix: bremer support calculation influence the consensus tree in the memory

• polish: the CI RI and TL are not reported as tables anymore, just plain text

- C++
Published by starsareintherose over 2 years ago

tnt_script - 0.0.6

guoyi.run

• fix: nelsen tree choose problem

• fix: adjust output order to keep selection correctly

- C++
Published by starsareintherose over 2 years ago

tnt_script - 0.0.5

tnt2winclada

• add interactive mode

• fix some claim

• add CMake

- C++
Published by starsareintherose over 2 years ago

tnt_script - 0.0.4

guoyi.run

• fix: error with quote

- C++
Published by starsareintherose over 2 years ago

tnt_script - 0.0.3

guoyi.run

• fix: the con.svg can't be export under windows

- C++
Published by starsareintherose almost 3 years ago

tnt_script - 0.0.2

tnt2winclada

• fix the format of output winclada

• cross-compile for windows via mingw x86_64-w64-mingw32-g++ tnt2winclada.cpp -o tnt2wincladaexe -static

- C++
Published by starsareintherose almost 3 years ago

tnt_script - 0.0.1

guoyi.run

• auto set implied weighting

• search tree via mult and xmult

• strict consensus tree

• bremer jak boot support

• map apo character

• get TL, RI, CI

## tnt2winclada

• convert winclada.tre produced by script to winclada accpetable format

• rewritten by C++

- C++
Published by starsareintherose almost 3 years ago