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Recent Releases of bayes_spec

bayes_spec - v1.9.0

What's Changed

  • update clusterposterior defaults, enable user-defined GMM arguments by @tvwenger in https://github.com/tvwenger/bayesspec/pull/85

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.8.0...v1.9.0

Scientific Software - Peer-reviewed - Python
Published by tvwenger 6 months ago

bayes_spec - v1.8.0

What's Changed

  • Initialize posterior clustering with k-means++ by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/84

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.9...v1.8.0

Scientific Software - Peer-reviewed - Python
Published by tvwenger 7 months ago

bayes_spec - v1.7.9

What's Changed

  • Improve variational inference stability by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/82

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.8...v1.7.9

Scientific Software - Peer-reviewed - Python
Published by tvwenger 7 months ago

bayes_spec - v1.7.8

What's Changed

  • Print unique solution in solve by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/77

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.7...v1.7.8

Scientific Software - Peer-reviewed - Python
Published by tvwenger 9 months ago

bayes_spec - v1.7.7

What's Changed

  • Catch exceptions in Optimize by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/76

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.6...v1.7.7

Scientific Software - Peer-reviewed - Python
Published by tvwenger 9 months ago

bayes_spec - v1.7.6

What's Changed

  • Remove multiple solution stopping criterion by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/74

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.5...v1.7.6

Scientific Software - Peer-reviewed - Python
Published by tvwenger 9 months ago

bayes_spec - v1.7.5

What's Changed

  • Implement start option by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/72

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.4...v1.7.5

Scientific Software - Peer-reviewed - Python
Published by tvwenger 9 months ago

bayes_spec - v1.7.4

What's Changed

  • add Dockerfile by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/69
  • Add plot_pair referencevalues support by @tvwenger in https://github.com/tvwenger/bayesspec/pull/70
  • Update install instructions with pinned arviz fork by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/71

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.3...v1.7.4

Scientific Software - Peer-reviewed - Python
Published by tvwenger 9 months ago

bayes_spec - v1.7.3

What's Changed

  • Add early stopping criteria to Optimize, adjust SpecData normalization by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/67
  • Update documentation by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/68

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.2...v1.7.3

Scientific Software - Peer-reviewed - Python
Published by tvwenger 10 months ago

bayes_spec - v1.7.2

What's Changed

  • update quick start example and paper by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/54
  • update paper by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/55
  • update paper by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/56

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.1...v1.7.2

  • This release is archived on Zenodo

Scientific Software - Peer-reviewed - Python
Published by tvwenger about 1 year ago

bayes_spec - v1.7.1

What's Changed

  • update LICENSE by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/47
  • update dependencies by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/49
  • Clean up documentation by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/48
  • catch prior errors in GaussModel and GaussNoiseModel by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/50
  • Add model tutorial by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/51
  • Update paper by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/52
  • update license in pyproject.toml by @tvwenger in https://github.com/tvwenger/bayes_spec/pull/53

Full Changelog: https://github.com/tvwenger/bayes_spec/compare/v1.7.0...v1.7.1

Scientific Software - Peer-reviewed - Python
Published by tvwenger about 1 year ago

bayes_spec - v1.7.0

  • Improves posterior clustering algorithm, improves chain convergence checks https://github.com/tvwenger/bayes_spec/pull/29
  • adds new features to optimize https://github.com/tvwenger/bayes_spec/pull/30
  • adds new features to predict_baseline https://github.com/tvwenger/bayes_spec/pull/31
  • minor bug fixes and improvements

Scientific Software - Peer-reviewed - Python
Published by tvwenger about 1 year ago

bayes_spec - v1.6.3

  • Update installation instructions because pymc must be installed through conda
  • Pin python to >3.11 https://github.com/tvwenger/bayes_spec/issues/18

Scientific Software - Peer-reviewed - Python
Published by tvwenger over 1 year ago

bayes_spec - v1.6.2

Package versioneer.py with source.

Scientific Software - Peer-reviewed - Python
Published by tvwenger over 1 year ago

bayes_spec - v1.6.1

  • Refactors model parameter access. Instead of user-defined model.cloud_params, model.baseline_params, model.hyper_params, and model.deterministics, adds automatically populated attributes model.cloud_freeRVs, model.cloud_deterministics, model.baseline_freeRVs, model.baseline_deterministics, model.hyper_freeRVs, and model.hyper_deterministics.

Scientific Software - Peer-reviewed - Python
Published by tvwenger over 1 year ago

bayes_spec - v1.5.0

Release for publication

Scientific Software - Peer-reviewed - Python
Published by tvwenger over 1 year ago

bayes_spec - v1.4.3

Scientific Software - Peer-reviewed - Python
Published by tvwenger over 1 year ago