Recent Releases of org.dishevelled:dsh-bio
org.dishevelled:dsh-bio - dishevelled-bio 3.0
Compatibility notes
- Deprecated code has been removed in version 3.0, introducing binary incompatibilities compared to version 2.4
- BED format support was improved in version 3.0, introducing binary incompatibilities compared to version 2.4
- Multiple implementations of
FastaToParquetand other Parquet-writing tools are annotated as Beta in this release; after further performance benchmarking the multiple implementations will be merged into one or two e.g.FastaToParquettool implementation(s)
What's Changed
- Added UniProt XML format support and tools
- Added PanSN-spec: Pangenome Sequence Naming support and tools
- improve BED support per hts-specs version 1.0 specification by @heuermh in https://github.com/heuermh/dishevelled-bio/pull/60
Full Changelog: https://github.com/heuermh/dishevelled-bio/compare/dsh-bio-2.4...dsh-bio-3.0
- Java
Published by codefair-io[bot] about 1 year ago
org.dishevelled:dsh-bio - dishevelled-bio 2.4
Compatibility notes
- BED format support will be improved in version 3.0; note deprecated annotations
- Multiple implementations of
FastaToParquettools annotated as Beta are present in this release; after further performance benchmarking the multiple implementations will be merged into a singleFastaToParquettool implementation
What's Changed
- Add sequence checksum implementations by @heuermh in https://github.com/heuermh/dishevelled-bio/pull/62
- Add deprecated annotations by @heuermh in https://github.com/heuermh/dishevelled-bio/pull/63
- wip, duckdb parquet support by @heuermh in https://github.com/heuermh/dishevelled-bio/pull/61
Full Changelog: https://github.com/heuermh/dishevelled-bio/compare/dsh-bio-2.3...dsh-bio-2.4
- Java
Published by heuermh almost 2 years ago
org.dishevelled:dsh-bio - dishevelled-bio 2.3
Note: This release requires version 17 or later of the JDK.
Full Changelog: https://github.com/heuermh/dishevelled-bio/compare/dsh-bio-2.2.2...dsh-bio-2.3
- Java
Published by heuermh over 2 years ago
org.dishevelled:dsh-bio - dishevelled-bio 2.2.2
Full Changelog: https://github.com/heuermh/dishevelled-bio/compare/dsh-bio-2.2.1...dsh-bio-2.2.2
- Java
Published by heuermh almost 3 years ago
org.dishevelled:dsh-bio - dishevelled-bio 2.2.1
Full Changelog: https://github.com/heuermh/dishevelled-bio/compare/dsh-bio-2.2...dsh-bio-2.2.1
- Java
Published by heuermh about 3 years ago
org.dishevelled:dsh-bio - dishevelled-bio 2.2
Full Changelog: https://github.com/heuermh/dishevelled-bio/compare/dsh-bio-2.1...dsh-bio-2.2
- Java
Published by heuermh about 3 years ago
org.dishevelled:dsh-bio - dishevelled-bio 2.1
What's Changed
- Add support for input paths on gs storage by @heuermh in https://github.com/heuermh/dishevelled-bio/pull/49
- Add jdk 17 to build matrix by @heuermh in https://github.com/heuermh/dishevelled-bio/pull/50
- Add support for input paths on s3 storage by @heuermh in https://github.com/heuermh/dishevelled-bio/pull/51
Full Changelog: https://github.com/heuermh/dishevelled-bio/compare/dsh-bio-2.0.9...dsh-bio-2.1
- Java
Published by heuermh over 3 years ago
org.dishevelled:dsh-bio - dishevelled-bio 2.0.9
What's Changed
- Update ADAM dependency version to 1.0 by @heuermh in https://github.com/heuermh/dishevelled-bio/pull/45
Full Changelog: https://github.com/heuermh/dishevelled-bio/compare/dsh-bio-2.0.8...dsh-bio-2.0.9
- Java
Published by heuermh about 4 years ago
org.dishevelled:dsh-bio - dishevelled-bio 2.0.8
Full Changelog: https://github.com/heuermh/dishevelled-bio/compare/dsh-bio-2.0.7...dsh-bio-2.0.8
- Java
Published by heuermh about 4 years ago
org.dishevelled:dsh-bio - dishevelled-bio 1.3.1
A native image built using GraalVM is available with this release, and attached here.
See https://github.com/heuermh/dishevelled-bio/blob/master/native/README.md
for more details.
- Java
Published by heuermh over 6 years ago
org.dishevelled:dsh-bio - dishevelled-bio 1.3
A native image built using GraalVM is available with this release, and attached here.
See https://github.com/heuermh/dishevelled-bio/blob/master/native/README.md
for more details.
- Java
Published by heuermh over 6 years ago