Recent Releases of pycomplexheatmap
pycomplexheatmap - 1.8.2
Update to 1.8.2: (1). support custom legend title (2). add parameter label to annotation functions (3). update center for DotClustermapPlotter
- Python
Published by DingWB 12 months ago
pycomplexheatmap - 1.8.1
Upgrade to 1.8.1:
(1). Fix bug for legendwidth
(2). Fix the bug for annotation, text not showing when annot=True (for matplotlib version > 3.7.5)
(3). Fix bug for dotHeatmap when multiple legends have the same key (for example, kesy of legenddict for dot legend and camp legend)
(4). Add ylim to all annotation functions.
- Python
Published by DingWB over 1 year ago
pycomplexheatmap - 1.8.0
(1). implemented bezier dendrogram (2). add anno_dendrogram (3). fix the bug of missing figure legend (https://github.com/DingWB/PyComplexHeatmap/issues/98)
- Python
Published by DingWB over 1 year ago
pycomplexheatmap - 1.7.9
(1). implemented bezier dendrogram (2). add anno_dendrogram
- Python
Published by DingWB over 1 year ago
pycomplexheatmap - 1.7.7
update to 1.7.7:
(1). Don't run use_pch_style() in default, user can choose to run it by PyComplexHeatmap.use_pch_style()
(2). Add parameter rad to anno_label.
(3). fix bug for auto cmap for category columns
(4). Enabled customized markers with a dict-form colors
(5). fix bug for post_processing when plot=False
- Python
Published by DingWB over 1 year ago
pycomplexheatmap - 1.7.6
Updated to 1.7.6: (1). support labelrotation=90 for xticklabels, see https://github.com/DingWB/PyComplexHeatmap/issues/78 (2). fix the bug for random100 (3). fix the bug for DotClustermapPlotter c=pd.Series (4). add parameter grid to DotClustermapPlotter (5). add parameter xorder and yorder to DotClustermapPlotter (6). Fix bug for color and legend for dot heatmap
- Python
Published by DingWB over 1 year ago
pycomplexheatmap - 1.7.4
(1). add supports for palettable cmap (2). Fix bug for ylim (anno_scatter) and legend showing (when height is too small)
- Python
Published by DingWB almost 2 years ago
pycomplexheatmap - 1.7.3
(1). add center in legendkws of plotcmap_legend (2). update anno_img (3). add supports for palettable cmap
- Python
Published by DingWB almost 2 years ago
pycomplexheatmap - 1.7.2
(1). Normalized the S in dotHeatmap globally instead of only in split heatmap. (2). Align the xlabel and ylabel to the center of ax_heatmap, instead of ax.
- Python
Published by DingWB almost 2 years ago
pycomplexheatmap - 1.7.1
Minor update: (1). update the bug of color when type(cmap) == dict and not hue is None in dotHeatmap (2). Add geneenrichmentanalysis.ipynb in docs
- Python
Published by DingWB almost 2 years ago
pycomplexheatmap - 1.7.0
update to 1.7.0:
(1). Fix the bug for the mismatch of dot size in the legend and dot size in the heatmap
(2). Allow custom arrowprops in anno_label
(3). Use max_s in replace of ratio in DotClustermapPlotter and dotHeatmap2d
(4). Add param dot_legend_marker in DotClustermapPlotter
(5). Update docs
- Python
Published by DingWB almost 2 years ago
pycomplexheatmap - 1.6.9
FIx bug for the vmin,vmax and scale in DotClustermapPlotter and dotHeatmap2d
- Python
Published by DingWB almost 2 years ago
pycomplexheatmap - 1.6.8
Update to 1.6.8:
(1). Add annolineplot
(2). Parameter colors of annobarplot can be a dict
(3) Set the grid to False in default for all kinds of annotations
- Python
Published by DingWB almost 2 years ago
pycomplexheatmap - 1.6.7
fix bug for the calculation of legend_width when default legend.fontsize is str (such median), instead of int
- Python
Published by DingWB almost 2 years ago
pycomplexheatmap - 1.6.6
Update to 1.6.6:
(1). Fix the bug for incorrect displaying of the dendrogram.
(2). Add annoimg (https://dingwb.github.io/PyComplexHeatmap/build/html/notebooks/advancedusage.html#Image-annotation)
(3). Add xticklabels and yticklabels to control whether to show all ticklabels or not (https://dingwb.github.io/PyComplexHeatmap/build/html/notebooks/advanced_usage.html#How-to-force-display-all-row/col-ticklabels?).
- Python
Published by DingWB about 2 years ago
pycomplexheatmap - 1.6.5
(1). Support custom linkage by add parameter: rowdendrogramkws=dict(linkage=mylinkage) for rows or col kws for columns. (2). Fix the bug for the wrong figure legend range after performing zscore and standard_scale.
- Python
Published by DingWB about 2 years ago
pycomplexheatmap - 1.6.4
1.6.4: implemented full dendrogram
- Python
Published by DingWB about 2 years ago
pycomplexheatmap - 1.6.3
Update to 1.6.3: implemented the full dendrogram and fixed the bug about the wrong position of the dendrogram for cluster_between_groups when the split_gap increased.
- Python
Published by DingWB about 2 years ago
pycomplexheatmap - 1.6.2
fix bug for the right anno_label when extend=True and add dendrogramplotter
- Python
Published by DingWB over 2 years ago
pycomplexheatmap - 1.6.1
Compared with previous version, new features were implemented, such as xlabel, ylabel, xlabel_kws,xlabel_bbox_kws and so on.
- Python
Published by DingWB over 2 years ago
pycomplexheatmap - 1.5.0
update to 1.5.0: estimate legend_width automatically & add citation
- Python
Published by DingWB almost 3 years ago
pycomplexheatmap - 1.4.3
update to 1.4.3: vmax,vmin in legendkws and pdf.fonttype=42 in defaultstyle
- Python
Published by DingWB almost 3 years ago