Recent Releases of datalab-server

datalab-server - v0.6.2

This patch release adds a hotfix for broken media blocks when encoding TIF files (#1318).

What's Changed

Fix serialisation of block data with nested file IDs in data model by @ml-evs in https://github.com/datalab-org/datalab/pull/1319
Improve unhandled error logging and handling by @ml-evs in https://github.com/datalab-org/datalab/pull/1320

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.6.1...v0.6.2

- Python
Published by ml-evs 6 months ago

This patch release adds an API config option CONFIG.ROOT_PATH to allow deployments to easily serve the API under a subpath (e.g., \api) on the same subdomain as the app. It also features a new validation model for block data, which should currently have no user-facing effects, but will allow for more formal extensions of block schemas in the future.

What's Changed

Add DataBlockResponse model to sanitize blocks_obj in API by @ml-evs in https://github.com/datalab-org/datalab/pull/1310
Add CONFIG.ROOT_PATH option to deploy API from custom path by @ml-evs in https://github.com/datalab-org/datalab/pull/1315

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.6.0...v0.6.1

- Python
Published by ml-evs 6 months ago

datalab-server - v0.6.0

This release includes a frankly comical number of changes, spanning significant new functionality and UI redesign, a fledgling plugin ecosystem, as well as several bug and quality-of-life fixes, performance improvements and backwards-compatible API enhancements.

A more regular release cadence will resume after the summer, with fewer release candidates next time around!

[!WARNING] This release also bumps the supported MongoDB version all the way from v3 to v8. Whilst older MongoDB versions should still continue to work, version 8 will now be tested and used in the docker builds, so we recommend you upgrade. For existing databases this requires you to first dump the database using mongodump with the old MongoDB version, then upgrade to the new version and restore the database with mongorestore. If you unsure about this process then please ask us for help!

Highlights

Extra functionality for all data tables: column selection, persistent user preferences and improved filtering.
Improved inventory management: native UI for hazard labels, CAS numbers and external barcodes, complementing the first release of the datalab-cheminventory-plugin for two-way sync with cheminventory.net.
Starting materials can now also have synthesis information recorded for them.
New blocks for UV-Vis data and in situ NMR data (developed in separate core plugin at datalab-app-plugin-insitu), as well as new file formats supported in the XRD (Rigaku's .rasx, variants of .xy), NMR (JCAMP-DX) blocks and media block (PDF documents).
A fledgling plugin ecosystem with ways to easily add new blocks to a specific datalab instance (docs), with datalab-server PyPI package for easier dependency management.
Improved item search throughout the API, removing the need to search on whitespace or punctuation delimited words (e.g., ID matches will now begin after just 3 characters, rather than needing to type a full ID).
More powerful UI block interactions via "events" that can be written purely Python (docs).

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.2...v0.6.0

- Python
Published by ml-evs 7 months ago

datalab-server - v0.6.0-rc.4

This release candidate makes some final fixes before the 0.6.0 release regarding the build procedure and updates several dependencies. There are also several UI improvements and bug fixes, particularly for the new in situ NMR and UV-Vis plugin, as well as the finalisation of the concept of datablock events.

[!WARNING] This release bumps the supported MongoDB version all the way from v3 to v8. Whilst older MongoDB versions should still continue to work, version 8 will now be tested and used in the docker builds, so we recommend you upgrade. For existing databases this requires you to first dump the database using mongodump with the old MongoDB version, then upgrade to the new version and restore the database with mongorestore. If you unsure about this process then please ask us for help!

What's Changed

Fix some PyPI metadata by @ml-evs in https://github.com/datalab-org/datalab/pull/1248
Add note about inconsistencies in ways configs are specified by @ml-evs in https://github.com/datalab-org/datalab/pull/1252
Replace crypto-browserify with simple js-md5 by @ml-evs in https://github.com/datalab-org/datalab/pull/1251
Remove browersify stream polyfill by @ml-evs in https://github.com/datalab-org/datalab/pull/1253
Bump the uppy ecosystem to v4 and fix styling by @ml-evs in https://github.com/datalab-org/datalab/pull/1255
Bump navani and switch to galvani mirror by @ml-evs in https://github.com/datalab-org/datalab/pull/1273
Add creators in SampleTable global search by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1257
Lift restriction on passing item type when updating via /save-item by @ml-evs in https://github.com/datalab-org/datalab/pull/1276
Use OAuth2 prompt to force login/account selection by provider by @ml-evs in https://github.com/datalab-org/datalab/pull/1270
Display NotImplementedBlock when an unknown block type is encountered by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1228
Update the collection page table with the latest dynamic data table options by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1225
Fix for either over- or under-specific file permissions by @ml-evs in https://github.com/datalab-org/datalab/pull/1279
Add custom UI for new in situ UV-Vis block by @be-smith in https://github.com/datalab-org/datalab/pull/1246
Embed block version in base class by @ml-evs in https://github.com/datalab-org/datalab/pull/1281
Add TOPAS-compatible .xy export to XRD block by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1277
Fix item selection dropdown missing scrollbar in synthesis info by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1280
Bump form-data from 4.0.1 to 4.0.4 in /webapp by @dependabot[bot] in https://github.com/datalab-org/datalab/pull/1284
Bump cypress to v13.17.0 and disable Firefox tests temporarily by @ml-evs in https://github.com/datalab-org/datalab/pull/1290
Add concept of block events and some design notes by @ml-evs in https://github.com/datalab-org/datalab/pull/1059
Update Python dependencies, uv and liccheck exceptions by @github-actions[bot] in https://github.com/datalab-org/datalab/pull/1002
Improve and restructure README, plus other minor docs fixes by @yue-here in https://github.com/datalab-org/datalab/pull/1245

New Contributors

@yue-here made their first contribution in https://github.com/datalab-org/datalab/pull/1245

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.6.0-rc.3...v0.6.0-rc.4

- Python
Published by ml-evs 7 months ago

datalab-server - v0.6.0-rc.3

If no issues arise, this will be the final release candidate for 0.6.0.

[!WARNING] This release bumps the supported MongoDB version all the way from v3 to v8. Whilst older MongoDB versions should still continue to work, version 8 will now be tested and used in the docker builds, so we recommend you upgrade. For existing databases this requires you to first dump the database using mongodump with the old MongoDB version, then upgrade to the new version and restore the database with mongorestore. If you unsure about this process then please ask us for help!

What's Changed

Update flask-cors requirement from ~=5.0 to ~=6.0 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/1223
Bump katex from 0.16.11 to 0.16.21 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/1037
Upgrade MongoDB to v8 by @ml-evs in https://github.com/datalab-org/datalab/pull/814
Remove some vue-cli-plugins dev dependencies by @ml-evs in https://github.com/datalab-org/datalab/pull/1233
Fix liccheck workflow and dependency ignores by @ml-evs in https://github.com/datalab-org/datalab/pull/1234
Add README note linking to other DataLab by @ml-evs in https://github.com/datalab-org/datalab/pull/1236
Bump astral-sh/setup-uv from 5 to 6 in the github-actions group by @dependabot in https://github.com/datalab-org/datalab/pull/1161
Fix for molar mass validation with invalid formula of starting materials by @ml-evs in https://github.com/datalab-org/datalab/pull/1244
Add relationships by refcode rather than item_id from the UI by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1227
Prepare 0.6.0 release by @ml-evs in https://github.com/datalab-org/datalab/pull/1211
Add exhaustive block API testing for all block types by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1242

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.6.0-rc.2...v0.6.0-rc.3

- Python
Published by ml-evs 8 months ago

datalab-server - v0.6.0-rc.2

What's Changed

Add support for JCAMP-DX files in NMR block by @ml-evs in https://github.com/datalab-org/datalab/pull/1205
Improve 1D Raman tests and extract more information from file headers by @ml-evs in https://github.com/datalab-org/datalab/pull/1216
Remove untested remote backup functionality and dependency on paramiko by @ml-evs in https://github.com/datalab-org/datalab/pull/1217
Remove ppm selection from in situ block in favour of the interactive plot by @ml-evs in https://github.com/datalab-org/datalab/pull/1215
Add CIF->PXRD calculator and refactor XRD block to better show multiple patterns by @ml-evs in https://github.com/datalab-org/datalab/pull/1128
Switch Raman block to use renishawWire package by @ml-evs in https://github.com/datalab-org/datalab/pull/1218
Add blueprint level auth guards to graphs, users and remote filesystems endpoints by @ml-evs in https://github.com/datalab-org/datalab/pull/1219
Limit batch interface to 100 items in UI and 10,000 via API by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1213
Avoid mentioning specific version in deployment docs and list VUE_APP_* env vars by @ml-evs in https://github.com/datalab-org/datalab/pull/1226

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.6.0-rc.1...v0.6.0-rc.2

- Python
Published by ml-evs 9 months ago

datalab-server - v0.6.0-rc.1

What's Changed

Add overlay while deleting multiple items by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1054
Attempt to bump uv to the 0.6.x series by @ml-evs in https://github.com/datalab-org/datalab/pull/1058
Added support for rasx xrd files by @be-smith in https://github.com/datalab-org/datalab/pull/1067
Add in situ NMR DataBlock as an app plugin by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1040
Bump docker/bake-action from 5 to 6 in the github-actions group by @dependabot in https://github.com/datalab-org/datalab/pull/1042
Add upper pin to pymongo by @ml-evs in https://github.com/datalab-org/datalab/pull/1082
Add pictogram UI components for hazard codes and use them for inventory by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/915
Wrap block descriptions into block menu by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1096
Allow case-insensitive file extensions through file select dropdown by @ml-evs in https://github.com/datalab-org/datalab/pull/1094
Make media block resizable by @jdbocarsly in https://github.com/datalab-org/datalab/pull/1099
Add regex-based alternative to full-text search by @ml-evs in https://github.com/datalab-org/datalab/pull/1098
Fix plugin loading not triggering on server startup by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1087
Bump elliptic from 6.6.0 to 6.6.1 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/1075
Add tests for hazard statement -> H-code -> pictogram mappings by @ml-evs in https://github.com/datalab-org/datalab/pull/1100
Bump @babel/runtime from 7.26.0 to 7.26.10 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/1076
Add components to data tables for showing block and file count by @ml-evs in https://github.com/datalab-org/datalab/pull/1080
Add search link to CAS Common Chemistry when CAS provided by @ml-evs in https://github.com/datalab-org/datalab/pull/1105
Reset unsaved warning after getSampleData() receives data by @jdbocarsly in https://github.com/datalab-org/datalab/pull/606
Fixed calling formatftir_plot method named when called to show data by @be-smith in https://github.com/datalab-org/datalab/pull/1107
Fix Datatable sorting for Collections and Creators by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1048
Adjust block and file counter style by @ml-evs in https://github.com/datalab-org/datalab/pull/1109
Dynamic page titles by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1051
Use importlib for plugin loading, fix test import order by @ml-evs in https://github.com/datalab-org/datalab/pull/1112
Bump nanoid from 3.3.7 to 3.3.8 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/1029
Treat warnings in pytest as errors, fixing things along the way by @ml-evs in https://github.com/datalab-org/datalab/pull/1116
Default to opening a new tab when clicking on the sample table by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1123
Fix oversharing regex search by @ml-evs in https://github.com/datalab-org/datalab/pull/1131
NMR and XRD block improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/1119
Add PDF support in MediaBlock using an iframe by @ml-evs in https://github.com/datalab-org/datalab/pull/1129
Update yarn.lock with latest dependencies by @github-actions in https://github.com/datalab-org/datalab/pull/1003
Make the regex item search the default, and use '%' for full text search by @ml-evs in https://github.com/datalab-org/datalab/pull/1103
CI build optimisations by @ml-evs in https://github.com/datalab-org/datalab/pull/1134
Extend XRD block to be more flexible to different separators in xy files by @ml-evs in https://github.com/datalab-org/datalab/pull/1137
Remove datatable-sort-badge when only one column is sorted by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1110
Revert JS dependency updates by @ml-evs in https://github.com/datalab-org/datalab/pull/1143
Bump http-proxy-middleware from 2.0.7 to 2.0.9 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/1144
Bump insitu plugin to 0.1.4 by @ml-evs in https://github.com/datalab-org/datalab/pull/1147
Add searching, filtering and sorting test in Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1146
Update galvani requirement from <0.5,~=0.4 to ~=0.5 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/1081
Add note about federation in README by @ml-evs in https://github.com/datalab-org/datalab/pull/1148
Add a dropdown to display/hide columns in Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1118
Add labels in Datatable to be displayed in Multiselect by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1152
Add guard for block info loading to edit page by @ml-evs in https://github.com/datalab-org/datalab/pull/1149
Rework resources.js when blocks require/do not require custom components by @ml-evs in https://github.com/datalab-org/datalab/pull/1154
Give starting material location its own row in the UI by @ml-evs in https://github.com/datalab-org/datalab/pull/1157
Added synthesis information to starting materials and made component collapsible by @be-smith in https://github.com/datalab-org/datalab/pull/1101
UV-vis block by @be-smith in https://github.com/datalab-org/datalab/pull/1133
Multiselect filtering for "no values" in nblocks column by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1106
Use localStorage for persistent column hiding in Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1124
Update deployment docs with more info on backups by @ml-evs in https://github.com/datalab-org/datalab/pull/1169
Quality of life updates to the inventory: barcode display, richer data table by @ml-evs in https://github.com/datalab-org/datalab/pull/1163
Add confirmation pop-up for file unlinking by @ml-evs in https://github.com/datalab-org/datalab/pull/1182
Assorted fixes for starting materials in collections by @ml-evs in https://github.com/datalab-org/datalab/pull/1167
Better handling of duplicate key errors in item creation by @ml-evs in https://github.com/datalab-org/datalab/pull/1156
Allow runtime compose args to be set from environment variables by @ml-evs in https://github.com/datalab-org/datalab/pull/1183
Improving column management in Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1170
Do not update 'files' reference when saving item by @ml-evs in https://github.com/datalab-org/datalab/pull/1055
Use PyPI release of navani 0.1.11 and bump in situ plugin by @be-smith in https://github.com/datalab-org/datalab/pull/1187
Fix DataTable select-all when sorting is applied by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1189
Give collection title and creators list their own rows by @ml-evs in https://github.com/datalab-org/datalab/pull/1193
Remove explicit dependency on galvani and NewareNDA now they are provided by navani by @ml-evs in https://github.com/datalab-org/datalab/pull/1197
Updating several dependencies in uv.lock by @ml-evs in https://github.com/datalab-org/datalab/pull/1199
Improvements to docs rendering for models and datablocks by @ml-evs in https://github.com/datalab-org/datalab/pull/1200
Bump pyupgrade to use --py310-plus, causing many type hint improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/1201
Set DataTable loading state when loading from store by @ml-evs in https://github.com/datalab-org/datalab/pull/1195
Add release workflow for PyPI/ghcr.io and automated license checking by @ml-evs in https://github.com/datalab-org/datalab/pull/1198
Delete large keys (e.g., bokehplotdata) when sending and before receiving updated block data by @ml-evs in https://github.com/datalab-org/datalab/pull/1207
Use tool.uv.sources to specify in situ plugin git dependency in pyproject by @ml-evs in https://github.com/datalab-org/datalab/pull/1209
Fix docker release workflow by @ml-evs in https://github.com/datalab-org/datalab/pull/1210
Refactor app block loading to prevent optional dependencies from breaking dev builds by @ml-evs in https://github.com/datalab-org/datalab/pull/1188

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.2...v0.6.0-rc.1

- Python
Published by ml-evs 9 months ago

datalab-server - v0.5.3-rc.7

What's Changed

Fix docker release workflow by @ml-evs in https://github.com/datalab-org/datalab/pull/1210

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.3-rc.6...v0.5.3-rc.7

- Python
Published by ml-evs 9 months ago

datalab-server - v0.5.3-rc.6

This release candidate simply checks the new release workflow functionality

What's Changed

Use tool.uv.sources to specify in situ plugin git dependency in pyproject by @ml-evs in https://github.com/datalab-org/datalab/pull/1209

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.3-rc.5...v0.5.3-rc.6

- Python
Published by ml-evs 9 months ago

datalab-server - v0.5.3-rc.5

Final release candidate before releasing 0.6.0, skipping this 0.5.3 version number in the end. This should trigger the first successful pre-release to PyPI.

What's Changed

Do not update 'files' reference when saving item by @ml-evs in https://github.com/datalab-org/datalab/pull/1055
Use PyPI release of navani 0.1.11 and bump in situ plugin by @be-smith in https://github.com/datalab-org/datalab/pull/1187
Fix DataTable select-all when sorting is applied by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1189
Give collection title and creators list their own rows by @ml-evs in https://github.com/datalab-org/datalab/pull/1193
Remove explicit dependency on galvani and NewareNDA now they are provided by navani by @ml-evs in https://github.com/datalab-org/datalab/pull/1197
Updating several dependencies in uv.lock by @ml-evs in https://github.com/datalab-org/datalab/pull/1199
Improvements to docs rendering for models and datablocks by @ml-evs in https://github.com/datalab-org/datalab/pull/1200
Bump pyupgrade to use --py310-plus, causing many type hint improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/1201
Set DataTable loading state when loading from store by @ml-evs in https://github.com/datalab-org/datalab/pull/1195
Add release workflow for PyPI/ghcr.io and automated license checking by @ml-evs in https://github.com/datalab-org/datalab/pull/1198
Delete large keys (e.g., bokehplotdata) when sending and before receiving updated block data by @ml-evs in https://github.com/datalab-org/datalab/pull/1207

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.3-rc.4...v0.5.3-rc.5

- Python
Published by ml-evs 9 months ago

datalab-server - v0.5.3-rc.4

Should be the final release candidate for this series. Includes the final round of features (UV-vis block, persistent table settings, better inventory management and other QoL fixes).

What's Changed

UV-vis block by @be-smith in https://github.com/datalab-org/datalab/pull/1133
Multiselect filtering for "no values" in nblocks column by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1106
Use localStorage for persistent column hiding in Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1124
Update deployment docs with more info on backups by @ml-evs in https://github.com/datalab-org/datalab/pull/1169
Quality of life updates to the inventory: barcode display, richer data table by @ml-evs in https://github.com/datalab-org/datalab/pull/1163
Add confirmation pop-up for file unlinking by @ml-evs in https://github.com/datalab-org/datalab/pull/1182
Assorted fixes for starting materials in collections by @ml-evs in https://github.com/datalab-org/datalab/pull/1167
Better handling of duplicate key errors in item creation by @ml-evs in https://github.com/datalab-org/datalab/pull/1156
Allow runtime compose args to be set from environment variables by @ml-evs in https://github.com/datalab-org/datalab/pull/1183
Improving column management in Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1170

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.3-rc.3...v0.5.3-rc.4

- Python
Published by ml-evs 9 months ago

datalab-server - v0.5.3-rc.3

What's Changed

Add note about federation in README by @ml-evs in https://github.com/datalab-org/datalab/pull/1148
Add a dropdown to display/hide columns in Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1118
Add labels in Datatable to be displayed in Multiselect by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1152
Add guard for block info loading to edit page by @ml-evs in https://github.com/datalab-org/datalab/pull/1149
Rework resources.js when blocks require/do not require custom components by @ml-evs in https://github.com/datalab-org/datalab/pull/1154
Give starting material location its own row in the UI by @ml-evs in https://github.com/datalab-org/datalab/pull/1157
Added synthesis information to starting materials and made component collapsible by @be-smith in https://github.com/datalab-org/datalab/pull/1101

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.3-rc.2...v0.5.3-rc.3

- Python
Published by ml-evs 10 months ago

datalab-server - v0.5.3-rc.2

What's Changed

Use importlib for plugin loading, fix test import order by @ml-evs in https://github.com/datalab-org/datalab/pull/1112
Bump nanoid from 3.3.7 to 3.3.8 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/1029
Treat warnings in pytest as errors, fixing things along the way by @ml-evs in https://github.com/datalab-org/datalab/pull/1116
Default to opening a new tab when clicking on the sample table by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1123
Fix oversharing regex search by @ml-evs in https://github.com/datalab-org/datalab/pull/1131
NMR and XRD block improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/1119
Add PDF support in MediaBlock using an iframe by @ml-evs in https://github.com/datalab-org/datalab/pull/1129
Update yarn.lock with latest dependencies by @github-actions in https://github.com/datalab-org/datalab/pull/1003
Make the regex item search the default, and use '%' for full text search by @ml-evs in https://github.com/datalab-org/datalab/pull/1103
CI build optimisations by @ml-evs in https://github.com/datalab-org/datalab/pull/1134
Extend XRD block to be more flexible to different separators in xy files by @ml-evs in https://github.com/datalab-org/datalab/pull/1137
Remove datatable-sort-badge when only one column is sorted by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1110
Revert JS dependency updates by @ml-evs in https://github.com/datalab-org/datalab/pull/1143
Bump http-proxy-middleware from 2.0.7 to 2.0.9 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/1144
Bump insitu plugin to 0.1.4 by @ml-evs in https://github.com/datalab-org/datalab/pull/1147
Add searching, filtering and sorting test in Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1146
Update galvani requirement from <0.5,~=0.4 to ~=0.5 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/1081

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.3-rc.1...v0.5.3-rc.2

- Python
Published by ml-evs 10 months ago

datalab-server - v0.5.3-rc.1

What's Changed

Add overlay while deleting multiple items by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1054
Attempt to bump uv to the 0.6.x series by @ml-evs in https://github.com/datalab-org/datalab/pull/1058
Added support for rasx xrd files by @be-smith in https://github.com/datalab-org/datalab/pull/1067
Add in situ NMR DataBlock as an app plugin by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1040
Bump docker/bake-action from 5 to 6 in the github-actions group by @dependabot in https://github.com/datalab-org/datalab/pull/1042
Add upper pin to pymongo by @ml-evs in https://github.com/datalab-org/datalab/pull/1082
Add pictogram UI components for hazard codes and use them for inventory by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/915
Wrap block descriptions into block menu by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1096
Allow case-insensitive file extensions through file select dropdown by @ml-evs in https://github.com/datalab-org/datalab/pull/1094
Make media block resizable by @jdbocarsly in https://github.com/datalab-org/datalab/pull/1099
Add regex-based alternative to full-text search by @ml-evs in https://github.com/datalab-org/datalab/pull/1098
Fix plugin loading not triggering on server startup by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1087
Bump elliptic from 6.6.0 to 6.6.1 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/1075
Add tests for hazard statement -> H-code -> pictogram mappings by @ml-evs in https://github.com/datalab-org/datalab/pull/1100
Add components to data tables for showing block and file count by @ml-evs in https://github.com/datalab-org/datalab/pull/1080
Add search link to CAS Common Chemistry when CAS provided by @ml-evs in https://github.com/datalab-org/datalab/pull/1105
Reset unsaved warning after getSampleData() receives data by @jdbocarsly in https://github.com/datalab-org/datalab/pull/606
Fixed calling formatftir_plot method named when called to show data by @be-smith in https://github.com/datalab-org/datalab/pull/1107
Fix Datatable sorting for Collections and Creators by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1048
Adjust block and file counter style by @ml-evs in https://github.com/datalab-org/datalab/pull/1109
Dynamic page titles by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1051

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.2...v0.5.3

- Python
Published by ml-evs 11 months ago

datalab-server - v0.5.2

What's Changed

Fix docs link in mkdocs by @ml-evs in https://github.com/datalab-org/datalab/pull/1044
Improve loading state for data-intensive blocks by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1049
Add support for reading excel-like spreadsheets in tabular data block by @ml-evs in https://github.com/datalab-org/datalab/pull/1052
Add Login Splash Screen by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/907
added ftir block and associated tests by @be-smith in https://github.com/datalab-org/datalab/pull/1061
Update CITATION.cff by @ml-evs in https://github.com/datalab-org/datalab/pull/1069

New Contributors

@be-smith made their first contribution in https://github.com/datalab-org/datalab/pull/1061

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.1...v0.5.2

- Python
Published by ml-evs 11 months ago

datalab-server - v0.5.1

This patch release simply pins the uv version used in builds to avoid future breakages.

What's Changed

Bump the github-actions group across 1 directory with 2 updates by @dependabot in https://github.com/datalab-org/datalab/pull/1031
Update uv to 0.5.x now that dynamic versioning is supported by @ml-evs in https://github.com/datalab-org/datalab/pull/1032
Pin uv by @ml-evs in https://github.com/datalab-org/datalab/pull/1039

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.0...v0.5.1

- Python
Published by ml-evs about 1 year ago

datalab-server - v0.5.0

It's a real one! Not a release candidate! This release is long overdue following the 8 pre-releases. The 0.5.x series now provides a stable base for us to begin some major overhauling of how we handle custom schemas and data blocks, both of which will form the basis of 0.6.x in the new year. The Ansible playbooks at datalab-ansible-terraform and the Python API package at datalab-python-api already both support this release.

Many thanks to all contributors: developers, user feedback and deployment managers!

Breaking changes

The Python server has been entirely repackaged with uv for much more streamlined dependency management (especially for external plugins). If you are using the docker deployments, then nothing should change for you, but developers may need to adjust their development setups following the instructions at INSTALL.md

Highlights

The table component used to display all items has been entirely rewritten, and is now more visually responsive and can accommodate custom schemas/components.
QR code generation and scanning for all items, optionally using the new datalab pURL service when configured with VUE_APP_QR_CODE_RESOLVER_URL.
Following from the block info from the last release, the API now reports the schemas it is using at /info/types, ready for these to become more easily configurable at the deployment level. The edit page and item table are beginning to dynamically use this information.
Improvements to the collections UI, allowing items to be added to collections more easily after creation.
Ability to selectively share items with certain users; this will soon be expanded to user groups and projects (via collections) with configurable defaults.
Several bug fixes to the UI, API (timezone consistency, tweaks to the LLM integration, better handling of permissions edge cases)
Ease-of-use features and new configuration options for deployments.

Exhaustive changelog

CI build time and fork compatibility improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/833
Tweak cache usage on docker builds by @ml-evs in https://github.com/datalab-org/datalab/pull/841
Repackage server as proper Python package, removing pipenv by @ml-evs in https://github.com/datalab-org/datalab/pull/604
Re-enable dependabot for Python dependencies by @ml-evs in https://github.com/datalab-org/datalab/pull/845
Remove release workflow now that versions are dynamic by @ml-evs in https://github.com/datalab-org/datalab/pull/847
Bump the github-actions group with 3 updates by @dependabot in https://github.com/datalab-org/datalab/pull/846
Fix docs formatting and update versioning scheme by @ml-evs in https://github.com/datalab-org/datalab/pull/850
Use uv and deps lockfiles in CI & pre-commit by @ml-evs in https://github.com/datalab-org/datalab/pull/851
Attempt to configure lockfile-only dependabot strategy by @ml-evs in https://github.com/datalab-org/datalab/pull/853
Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/854
Do not show option to connect accounts in account settings if not configured in server by @ml-evs in https://github.com/datalab-org/datalab/pull/856
Use node v20 in build, CI and dev environments by @ml-evs in https://github.com/datalab-org/datalab/pull/858
Let linting settings reflect development usage by @ml-evs in https://github.com/datalab-org/datalab/pull/859
Add QR code generation and scanning to UI by @ml-evs in https://github.com/datalab-org/datalab/pull/808
Refactor login components by @ml-evs in https://github.com/datalab-org/datalab/pull/857
Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/863
Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/837
Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in https://github.com/datalab-org/datalab/pull/855
Bump flask-cors from 4.0.1 to 5.0.0 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/867
Bump cryptography from 43.0.0 to 43.0.1 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/871
Filter out b64-encoded data before sending to LLM by @ml-evs in https://github.com/datalab-org/datalab/pull/870
Fix deployment config options for new VUE_APP settings by @ml-evs in https://github.com/datalab-org/datalab/pull/874
Lockfile compatibility by @ml-evs in https://github.com/datalab-org/datalab/pull/873
Fix QR code warning showing when not required by @ml-evs in https://github.com/datalab-org/datalab/pull/875
Close database ports by default by @ml-evs in https://github.com/datalab-org/datalab/pull/876
Add component tests by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/872
Add API route to add items to a collection and associated UI by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/828
Improving prime Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/862
Fix some issues in the datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/888
Update deps lockfiles and use uv sync in CI by @ml-evs in https://github.com/datalab-org/datalab/pull/899
Add dynamic data table on collection page by @ml-evs in https://github.com/datalab-org/datalab/pull/885
Hotfix for new e2e test command by @ml-evs in https://github.com/datalab-org/datalab/pull/904
Fix SelectAll issue in DataTable after search by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/893
Add support for XRD files that have indeterminate headers (e.g., diffrac.eva export) by @ml-evs in https://github.com/datalab-org/datalab/pull/905
Add Collapsible Functionality for Block Warnings by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/898
Exclude pydantic from dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/908
Bump the python-dependencies-dev group in /pydatalab with 2 updates by @dependabot in https://github.com/datalab-org/datalab/pull/910
Rearrange dependencies and update navani by @ml-evs in https://github.com/datalab-org/datalab/pull/911
Re-enable lockfile only mode of dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/912
Add dropdown with actions buttons for selected items inside DataTable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/902
Switch Python package to src-layout by @ml-evs in https://github.com/datalab-org/datalab/pull/865
Update uv.lock file and use --locked in uv sync by @ml-evs in https://github.com/datalab-org/datalab/pull/913
Refactor ID Validation Logic into Utility Function by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/896
Rid ourselves of pipenv, requirements files, dev containers and other unecessary complexity by @ml-evs in https://github.com/datalab-org/datalab/pull/914
Install datalab as editable inside docker build to make env passing simpler by @ml-evs in https://github.com/datalab-org/datalab/pull/917
Fix css issues in DynamicDataTable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/919
Update CODEOWNERS by @ml-evs in https://github.com/datalab-org/datalab/pull/922
Ensure that new collection immutable_id is returned upon creation by @ml-evs in https://github.com/datalab-org/datalab/pull/925
Use dynamic version number from git tags in webapp by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/906
Explcitly set OAUTHLIB_INSECURE_TRANSPORT env var when present in .env by @ml-evs in https://github.com/datalab-org/datalab/pull/928
Configure coverage for new src-layout by @ml-evs in https://github.com/datalab-org/datalab/pull/929
Use git version inside app container build by @ml-evs in https://github.com/datalab-org/datalab/pull/930
Better handle case where block in database is not implemented by app/API by @ml-evs in https://github.com/datalab-org/datalab/pull/931
Update collection deletion endpoint to also unlink items by @ml-evs in https://github.com/datalab-org/datalab/pull/933
Set up custom primevue theme by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/921
Fix bug where blocks would not be loaded automatically by @ml-evs in https://github.com/datalab-org/datalab/pull/935
Fix eslint warning in CollectionInformation by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/934
Tweak for edit page to allow upload file modal to load correctly by @ml-evs in https://github.com/datalab-org/datalab/pull/937
Hotfix for file-overwriting from uppy by @ml-evs in https://github.com/datalab-org/datalab/pull/942
Add scheduled uv lock -U to replace dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/945
Bump express from 4.19.2 to 4.21.0 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/883
Tidy up uv workflow after first generated PR by @ml-evs in https://github.com/datalab-org/datalab/pull/947
Update pillow requirement from ~=10.4 to ~=11.0 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/949
Add suggested 'ready-for-review' workaround to checks not running from actions-created PRs by @ml-evs in https://github.com/datalab-org/datalab/pull/959
Add scheduled yarn upgrade job in CI by @ml-evs in https://github.com/datalab-org/datalab/pull/960
Fix typo in yarn upgrade workflow by @ml-evs in https://github.com/datalab-org/datalab/pull/961
Add body to automated yarn upgrade PR by @ml-evs in https://github.com/datalab-org/datalab/pull/962
yarn upgrade PR should be created as a draft by @ml-evs in https://github.com/datalab-org/datalab/pull/964
Remove vue/cli as dependency and add missing polyfills by @ml-evs in https://github.com/datalab-org/datalab/pull/957
Refresh user list after activating a user in admin dashboard by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/967
Add e2e JS tests for file upload and block creation by @ml-evs in https://github.com/datalab-org/datalab/pull/968
Split vue docker build into two stages by @ml-evs in https://github.com/datalab-org/datalab/pull/958
Rework of the files utilities and endpoints for both app and API by @ml-evs in https://github.com/datalab-org/datalab/pull/943
Reduces updates frequency to once a week by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/975
Update uv.lock with latest dependencies by @github-actions in https://github.com/datalab-org/datalab/pull/946
Update yarn.lock with latest dependencies by @github-actions in https://github.com/datalab-org/datalab/pull/963
Stagger fortnightly scheduled uv/yarn updates by @ml-evs in https://github.com/datalab-org/datalab/pull/977
Fix default MAX_CONTENT_LENGTH setting to 10 GB by @ml-evs in https://github.com/datalab-org/datalab/pull/979
Fix and streamline attribute lookup in MediaBlock by @ml-evs in https://github.com/datalab-org/datalab/pull/981
Add timezone consistency across deployments & UI by @ml-evs in https://github.com/datalab-org/datalab/pull/970
Chatblock deployment fix: make sure LLM API keys are passed from .env to environ by @ml-evs in https://github.com/datalab-org/datalab/pull/990
Add latest Claude models by @ml-evs in https://github.com/datalab-org/datalab/pull/986
[pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/datalab-org/datalab/pull/987
Explicitly don't use a polyfill for vm by @jdbocarsly in https://github.com/datalab-org/datalab/pull/996
Revert overly smart schedule for upgrade PRs by @ml-evs in https://github.com/datalab-org/datalab/pull/999
Fix and refactor FTS field generation by @ml-evs in https://github.com/datalab-org/datalab/pull/998
Add API endpoint for reporting schemas by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/941
Enhanced filtering UI on fields with components by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/974
Add docker build var to spoof git tag version by @ml-evs in https://github.com/datalab-org/datalab/pull/1001
Fix vue-loader errors by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1004
LoginDetails alignment when a user is unverified by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/984
Tweak git version spoofing in docker config, and test it by @ml-evs in https://github.com/datalab-org/datalab/pull/1006
Allow both search and filter to be specified simultaneously in entry table by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1010
Dynamic table tweaks: filter by item type enum & resizable columns by @ml-evs in https://github.com/datalab-org/datalab/pull/1011
Add better layouts and configuration options to the Item Graph by @jdbocarsly in https://github.com/datalab-org/datalab/pull/813
Add component tests for DataTable Prime components by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/884
Improve DataTable Pagination Handling with Vuex by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/1013
Add option to configure whether IDs are automatic by default by @ml-evs in https://github.com/datalab-org/datalab/pull/1019
Use <router-link> for "Home" button on edit page to preserve store by @ml-evs in https://github.com/datalab-org/datalab/pull/1018
User select and sharing of sample page with creators by @ml-evs in https://github.com/datalab-org/datalab/pull/830
Add patch for starting material & equipment permissions by @ml-evs in https://github.com/datalab-org/datalab/pull/1020
Carve out exception for delete permission for group-wide items by @ml-evs in https://github.com/datalab-org/datalab/pull/1023
Add block types and titles to summary API response by @ml-evs in https://github.com/datalab-org/datalab/pull/1025
Add CHANGELOG for 0.5.0 by @ml-evs in https://github.com/datalab-org/datalab/pull/1024

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.4.4...v0.5.0

- Python
Published by ml-evs about 1 year ago

datalab-server - v0.5.0-rc.8

Right, maybe this will be the final RC. Compared to the last one, this mostly just refreshes our dependencies and hotfixes a few issues introduced in previous release candidates.

What's Changed

CI build time and fork compatibility improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/833
Tweak cache usage on docker builds by @ml-evs in https://github.com/datalab-org/datalab/pull/841
Repackage server as proper Python package, removing pipenv by @ml-evs in https://github.com/datalab-org/datalab/pull/604
Re-enable dependabot for Python dependencies by @ml-evs in https://github.com/datalab-org/datalab/pull/845
Remove release workflow now that versions are dynamic by @ml-evs in https://github.com/datalab-org/datalab/pull/847
Bump the github-actions group with 3 updates by @dependabot in https://github.com/datalab-org/datalab/pull/846
Fix docs formatting and update versioning scheme by @ml-evs in https://github.com/datalab-org/datalab/pull/850
Use uv and deps lockfiles in CI & pre-commit by @ml-evs in https://github.com/datalab-org/datalab/pull/851
Attempt to configure lockfile-only dependabot strategy by @ml-evs in https://github.com/datalab-org/datalab/pull/853
Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/854
Do not show option to connect accounts in account settings if not configured in server by @ml-evs in https://github.com/datalab-org/datalab/pull/856
Use node v20 in build, CI and dev environments by @ml-evs in https://github.com/datalab-org/datalab/pull/858
Let linting settings reflect development usage by @ml-evs in https://github.com/datalab-org/datalab/pull/859
Add QR code generation and scanning to UI by @ml-evs in https://github.com/datalab-org/datalab/pull/808
Refactor login components by @ml-evs in https://github.com/datalab-org/datalab/pull/857
Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/863
Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/837
Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in https://github.com/datalab-org/datalab/pull/855
Bump flask-cors from 4.0.1 to 5.0.0 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/867
Bump cryptography from 43.0.0 to 43.0.1 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/871
Filter out b64-encoded data before sending to LLM by @ml-evs in https://github.com/datalab-org/datalab/pull/870
Fix deployment config options for new VUE_APP settings by @ml-evs in https://github.com/datalab-org/datalab/pull/874
Lockfile compatibility by @ml-evs in https://github.com/datalab-org/datalab/pull/873
Fix QR code warning showing when not required by @ml-evs in https://github.com/datalab-org/datalab/pull/875
Close database ports by default by @ml-evs in https://github.com/datalab-org/datalab/pull/876
Add component tests by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/872
Add API route to add items to a collection and associated UI by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/828
Improving prime Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/862
Fix some issues in the datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/888
Update deps lockfiles and use uv sync in CI by @ml-evs in https://github.com/datalab-org/datalab/pull/899
Add dynamic data table on collection page by @ml-evs in https://github.com/datalab-org/datalab/pull/885
Hotfix for new e2e test command by @ml-evs in https://github.com/datalab-org/datalab/pull/904
Fix SelectAll issue in DataTable after search by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/893
Add support for XRD files that have indeterminate headers (e.g., diffrac.eva export) by @ml-evs in https://github.com/datalab-org/datalab/pull/905
Add Collapsible Functionality for Block Warnings by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/898
Exclude pydantic from dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/908
Bump the python-dependencies-dev group in /pydatalab with 2 updates by @dependabot in https://github.com/datalab-org/datalab/pull/910
Rearrange dependencies and update navani by @ml-evs in https://github.com/datalab-org/datalab/pull/911
Re-enable lockfile only mode of dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/912
Add dropdown with actions buttons for selected items inside DataTable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/902
Switch Python package to src-layout by @ml-evs in https://github.com/datalab-org/datalab/pull/865
Update uv.lock file and use --locked in uv sync by @ml-evs in https://github.com/datalab-org/datalab/pull/913
Refactor ID Validation Logic into Utility Function by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/896
Rid ourselves of pipenv, requirements files, dev containers and other unecessary complexity by @ml-evs in https://github.com/datalab-org/datalab/pull/914
Install datalab as editable inside docker build to make env passing simpler by @ml-evs in https://github.com/datalab-org/datalab/pull/917
Fix css issues in DynamicDataTable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/919
Update CODEOWNERS by @ml-evs in https://github.com/datalab-org/datalab/pull/922
Ensure that new collection immutable_id is returned upon creation by @ml-evs in https://github.com/datalab-org/datalab/pull/925
Use dynamic version number from git tags in webapp by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/906
Explcitly set OAUTHLIB_INSECURE_TRANSPORT env var when present in .env by @ml-evs in https://github.com/datalab-org/datalab/pull/928
Configure coverage for new src-layout by @ml-evs in https://github.com/datalab-org/datalab/pull/929
Use git version inside app container build by @ml-evs in https://github.com/datalab-org/datalab/pull/930
Better handle case where block in database is not implemented by app/API by @ml-evs in https://github.com/datalab-org/datalab/pull/931
Update collection deletion endpoint to also unlink items by @ml-evs in https://github.com/datalab-org/datalab/pull/933
Set up custom primevue theme by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/921
Fix bug where blocks would not be loaded automatically by @ml-evs in https://github.com/datalab-org/datalab/pull/935
Fix eslint warning in CollectionInformation by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/934
Tweak for edit page to allow upload file modal to load correctly by @ml-evs in https://github.com/datalab-org/datalab/pull/937
Hotfix for file-overwriting from uppy by @ml-evs in https://github.com/datalab-org/datalab/pull/942
Add scheduled uv lock -U to replace dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/945
Bump express from 4.19.2 to 4.21.0 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/883
Tidy up uv workflow after first generated PR by @ml-evs in https://github.com/datalab-org/datalab/pull/947
Update pillow requirement from ~=10.4 to ~=11.0 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/949
Add suggested 'ready-for-review' workaround to checks not running from actions-created PRs by @ml-evs in https://github.com/datalab-org/datalab/pull/959
Add scheduled yarn upgrade job in CI by @ml-evs in https://github.com/datalab-org/datalab/pull/960
Fix typo in yarn upgrade workflow by @ml-evs in https://github.com/datalab-org/datalab/pull/961
Add body to automated yarn upgrade PR by @ml-evs in https://github.com/datalab-org/datalab/pull/962
yarn upgrade PR should be created as a draft by @ml-evs in https://github.com/datalab-org/datalab/pull/964
Remove vue/cli as dependency and add missing polyfills by @ml-evs in https://github.com/datalab-org/datalab/pull/957
Refresh user list after activating a user in admin dashboard by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/967
Add e2e JS tests for file upload and block creation by @ml-evs in https://github.com/datalab-org/datalab/pull/968
Split vue docker build into two stages by @ml-evs in https://github.com/datalab-org/datalab/pull/958
Rework of the files utilities and endpoints for both app and API by @ml-evs in https://github.com/datalab-org/datalab/pull/943
Reduces updates frequency to once a week by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/975
Update uv.lock with latest dependencies by @github-actions in https://github.com/datalab-org/datalab/pull/946
Update yarn.lock with latest dependencies by @github-actions in https://github.com/datalab-org/datalab/pull/963
Stagger fortnightly scheduled uv/yarn updates by @ml-evs in https://github.com/datalab-org/datalab/pull/977
Fix default MAX_CONTENT_LENGTH setting to 10 GB by @ml-evs in https://github.com/datalab-org/datalab/pull/979
Fix and streamline attribute lookup in MediaBlock by @ml-evs in https://github.com/datalab-org/datalab/pull/981
Add timezone consistency across deployments & UI by @ml-evs in https://github.com/datalab-org/datalab/pull/970

New Contributors

@github-actions made their first contribution in https://github.com/datalab-org/datalab/pull/946

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.4.4...v0.5.0-rc.8

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.5.0-rc.7

Hopefully the final release candidate for 0.5.0! This rc contains several bug fixes and UI tweaks.

What's Changed

Update CODEOWNERS by @ml-evs in https://github.com/datalab-org/datalab/pull/922
Ensure that new collection immutable_id is returned upon creation by @ml-evs in https://github.com/datalab-org/datalab/pull/925
Use dynamic version number from git tags in webapp by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/906
Explcitly set OAUTHLIB_INSECURE_TRANSPORT env var when present in .env by @ml-evs in https://github.com/datalab-org/datalab/pull/928
Configure coverage for new src-layout by @ml-evs in https://github.com/datalab-org/datalab/pull/929
Use git version inside app container build by @ml-evs in https://github.com/datalab-org/datalab/pull/930
Better handle case where block in database is not implemented by app/API by @ml-evs in https://github.com/datalab-org/datalab/pull/931
Update collection deletion endpoint to also unlink items by @ml-evs in https://github.com/datalab-org/datalab/pull/933
Set up custom primevue theme by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/921
Fix bug where blocks would not be loaded automatically by @ml-evs in https://github.com/datalab-org/datalab/pull/935
Fix eslint warning in CollectionInformation by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/934
Tweak for edit page to allow upload file modal to load correctly by @ml-evs in https://github.com/datalab-org/datalab/pull/937

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.0-rc.6...v0.5.0-rc.7

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.5.0-rc.6

What's Changed

Update uv.lock file and use --locked in uv sync by @ml-evs in https://github.com/datalab-org/datalab/pull/913
Refactor ID Validation Logic into Utility Function by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/896
Rid ourselves of pipenv, requirements files, dev containers and other unecessary complexity by @ml-evs in https://github.com/datalab-org/datalab/pull/914
Install datalab as editable inside docker build to make env passing simpler by @ml-evs in https://github.com/datalab-org/datalab/pull/917
Fix css issues in DynamicDataTable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/919

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.5.0-rc.5...v0.5.0-rc.6

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.5.0-rc.5

What's Changed

CI build time and fork compatibility improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/833
Tweak cache usage on docker builds by @ml-evs in https://github.com/datalab-org/datalab/pull/841
Repackage server as proper Python package, removing pipenv by @ml-evs in https://github.com/datalab-org/datalab/pull/604
Re-enable dependabot for Python dependencies by @ml-evs in https://github.com/datalab-org/datalab/pull/845
Remove release workflow now that versions are dynamic by @ml-evs in https://github.com/datalab-org/datalab/pull/847
Bump the github-actions group with 3 updates by @dependabot in https://github.com/datalab-org/datalab/pull/846
Fix docs formatting and update versioning scheme by @ml-evs in https://github.com/datalab-org/datalab/pull/850
Use uv and deps lockfiles in CI & pre-commit by @ml-evs in https://github.com/datalab-org/datalab/pull/851
Attempt to configure lockfile-only dependabot strategy by @ml-evs in https://github.com/datalab-org/datalab/pull/853
Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/854
Do not show option to connect accounts in account settings if not configured in server by @ml-evs in https://github.com/datalab-org/datalab/pull/856
Use node v20 in build, CI and dev environments by @ml-evs in https://github.com/datalab-org/datalab/pull/858
Let linting settings reflect development usage by @ml-evs in https://github.com/datalab-org/datalab/pull/859
Add QR code generation and scanning to UI by @ml-evs in https://github.com/datalab-org/datalab/pull/808
Refactor login components by @ml-evs in https://github.com/datalab-org/datalab/pull/857
Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/863
Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/837
Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in https://github.com/datalab-org/datalab/pull/855
Bump flask-cors from 4.0.1 to 5.0.0 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/867
Bump cryptography from 43.0.0 to 43.0.1 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/871
Filter out b64-encoded data before sending to LLM by @ml-evs in https://github.com/datalab-org/datalab/pull/870
Fix deployment config options for new VUE_APP settings by @ml-evs in https://github.com/datalab-org/datalab/pull/874
Lockfile compatibility by @ml-evs in https://github.com/datalab-org/datalab/pull/873
Fix QR code warning showing when not required by @ml-evs in https://github.com/datalab-org/datalab/pull/875
Close database ports by default by @ml-evs in https://github.com/datalab-org/datalab/pull/876
Add component tests by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/872
Add API route to add items to a collection and associated UI by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/828
Improving prime Datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/862
Fix some issues in the datatable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/888
Update deps lockfiles and use uv sync in CI by @ml-evs in https://github.com/datalab-org/datalab/pull/899
Add dynamic data table on collection page by @ml-evs in https://github.com/datalab-org/datalab/pull/885
Hotfix for new e2e test command by @ml-evs in https://github.com/datalab-org/datalab/pull/904
Fix SelectAll issue in DataTable after search by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/893
Add support for XRD files that have indeterminate headers (e.g., diffrac.eva export) by @ml-evs in https://github.com/datalab-org/datalab/pull/905
Add Collapsible Functionality for Block Warnings by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/898
Exclude pydantic from dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/908
Bump the python-dependencies-dev group in /pydatalab with 2 updates by @dependabot in https://github.com/datalab-org/datalab/pull/910
Rearrange dependencies and update navani by @ml-evs in https://github.com/datalab-org/datalab/pull/911
Re-enable lockfile only mode of dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/912
Add dropdown with actions buttons for selected items inside DataTable by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/902
Switch Python package to src-layout by @ml-evs in https://github.com/datalab-org/datalab/pull/865

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.4.4...v0.5.0-rc.5

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.5.0-rc.4

What's Changed

CI build time and fork compatibility improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/833
Tweak cache usage on docker builds by @ml-evs in https://github.com/datalab-org/datalab/pull/841
Repackage server as proper Python package, removing pipenv by @ml-evs in https://github.com/datalab-org/datalab/pull/604
Re-enable dependabot for Python dependencies by @ml-evs in https://github.com/datalab-org/datalab/pull/845
Remove release workflow now that versions are dynamic by @ml-evs in https://github.com/datalab-org/datalab/pull/847
Bump the github-actions group with 3 updates by @dependabot in https://github.com/datalab-org/datalab/pull/846
Fix docs formatting and update versioning scheme by @ml-evs in https://github.com/datalab-org/datalab/pull/850
Use uv and deps lockfiles in CI & pre-commit by @ml-evs in https://github.com/datalab-org/datalab/pull/851
Attempt to configure lockfile-only dependabot strategy by @ml-evs in https://github.com/datalab-org/datalab/pull/853
Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/854
Do not show option to connect accounts in account settings if not configured in server by @ml-evs in https://github.com/datalab-org/datalab/pull/856
Use node v20 in build, CI and dev environments by @ml-evs in https://github.com/datalab-org/datalab/pull/858
Let linting settings reflect development usage by @ml-evs in https://github.com/datalab-org/datalab/pull/859
Add QR code generation and scanning to UI by @ml-evs in https://github.com/datalab-org/datalab/pull/808
Refactor login components by @ml-evs in https://github.com/datalab-org/datalab/pull/857
Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/863
Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/837
Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in https://github.com/datalab-org/datalab/pull/855
Bump flask-cors from 4.0.1 to 5.0.0 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/867
Bump cryptography from 43.0.0 to 43.0.1 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/871
Filter out b64-encoded data before sending to LLM by @ml-evs in https://github.com/datalab-org/datalab/pull/870
Fix deployment config options for new VUE_APP settings by @ml-evs in https://github.com/datalab-org/datalab/pull/874
Lockfile compatibility by @ml-evs in https://github.com/datalab-org/datalab/pull/873
Fix QR code warning showing when not required by @ml-evs in https://github.com/datalab-org/datalab/pull/875
Close database ports by default by @ml-evs in https://github.com/datalab-org/datalab/pull/876

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.4.4...v0.5.0-rc.4

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.5.0-rc.3

What's Changed

CI build time and fork compatibility improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/833
Tweak cache usage on docker builds by @ml-evs in https://github.com/datalab-org/datalab/pull/841
Repackage server as proper Python package, removing pipenv by @ml-evs in https://github.com/datalab-org/datalab/pull/604
Re-enable dependabot for Python dependencies by @ml-evs in https://github.com/datalab-org/datalab/pull/845
Remove release workflow now that versions are dynamic by @ml-evs in https://github.com/datalab-org/datalab/pull/847
Bump the github-actions group with 3 updates by @dependabot in https://github.com/datalab-org/datalab/pull/846
Fix docs formatting and update versioning scheme by @ml-evs in https://github.com/datalab-org/datalab/pull/850
Use uv and deps lockfiles in CI & pre-commit by @ml-evs in https://github.com/datalab-org/datalab/pull/851
Attempt to configure lockfile-only dependabot strategy by @ml-evs in https://github.com/datalab-org/datalab/pull/853
Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/854
Do not show option to connect accounts in account settings if not configured in server by @ml-evs in https://github.com/datalab-org/datalab/pull/856
Use node v20 in build, CI and dev environments by @ml-evs in https://github.com/datalab-org/datalab/pull/858
Let linting settings reflect development usage by @ml-evs in https://github.com/datalab-org/datalab/pull/859
Add QR code generation and scanning to UI by @ml-evs in https://github.com/datalab-org/datalab/pull/808
Refactor login components by @ml-evs in https://github.com/datalab-org/datalab/pull/857
Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/863
Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/837
Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in https://github.com/datalab-org/datalab/pull/855
Bump flask-cors from 4.0.1 to 5.0.0 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/867
Bump cryptography from 43.0.0 to 43.0.1 in /pydatalab by @dependabot in https://github.com/datalab-org/datalab/pull/871
Filter out b64-encoded data before sending to LLM by @ml-evs in https://github.com/datalab-org/datalab/pull/870
Fix deployment config options for new VUE_APP settings by @ml-evs in https://github.com/datalab-org/datalab/pull/874
Lockfile compatibility by @ml-evs in https://github.com/datalab-org/datalab/pull/873
Fix QR code warning showing when not required by @ml-evs in https://github.com/datalab-org/datalab/pull/875

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.4.4...v0.5.0-rc.3

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.5.0-rc.2

What's Changed

CI build time and fork compatibility improvements by @ml-evs in https://github.com/datalab-org/datalab/pull/833
Tweak cache usage on docker builds by @ml-evs in https://github.com/datalab-org/datalab/pull/841
Repackage server as proper Python package, removing pipenv by @ml-evs in https://github.com/datalab-org/datalab/pull/604
Re-enable dependabot for Python dependencies by @ml-evs in https://github.com/datalab-org/datalab/pull/845
Remove release workflow now that versions are dynamic by @ml-evs in https://github.com/datalab-org/datalab/pull/847
Bump the github-actions group with 3 updates by @dependabot in https://github.com/datalab-org/datalab/pull/846
Fix docs formatting and update versioning scheme by @ml-evs in https://github.com/datalab-org/datalab/pull/850
Use uv and deps lockfiles in CI & pre-commit by @ml-evs in https://github.com/datalab-org/datalab/pull/851
Attempt to configure lockfile-only dependabot strategy by @ml-evs in https://github.com/datalab-org/datalab/pull/853
Re-attempt to use lockfile-only strategy with dependabot by @ml-evs in https://github.com/datalab-org/datalab/pull/854
Do not show option to connect accounts in account settings if not configured in server by @ml-evs in https://github.com/datalab-org/datalab/pull/856
Use node v20 in build, CI and dev environments by @ml-evs in https://github.com/datalab-org/datalab/pull/858
Let linting settings reflect development usage by @ml-evs in https://github.com/datalab-org/datalab/pull/859
Add QR code generation and scanning to UI by @ml-evs in https://github.com/datalab-org/datalab/pull/808
Refactor login components by @ml-evs in https://github.com/datalab-org/datalab/pull/857
Bump webpack from 5.88.2 to 5.94.0 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/863
Bump elliptic from 6.5.4 to 6.5.7 in /webapp by @dependabot in https://github.com/datalab-org/datalab/pull/837
Deprecate gpt-3.5-turbo series and handle missing models in chatblock by @ml-evs in https://github.com/datalab-org/datalab/pull/855

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.4.4...v0.5.0-rc.2

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.4.4

This release primarily contains some bugfixes for the echem block, as well as tidying in preparation of the next release.

What's Changed

Removed unused css by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/826
Remove final mentions of odbx.science by @ml-evs in https://github.com/datalab-org/datalab/pull/827
Add routes for resolving items by refcode by @ml-evs in https://github.com/datalab-org/datalab/pull/807
Fix block errors caused by seemingly defunct theme options in bokeh by @ml-evs in https://github.com/datalab-org/datalab/pull/829
Update to latest navani version, fixing Neware normalisation issues by @ml-evs in https://github.com/datalab-org/datalab/pull/836
Reload echem data by default, unless disabled by @ml-evs in https://github.com/datalab-org/datalab/pull/840

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.4.3...v0.4.4

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.4.3

This release simply tweaks some testing and release procedures.

What's Changed

Re-enable Firefox e2e tests by @ml-evs in https://github.com/datalab-org/datalab/pull/711
Try to group cypress tests in same run by @ml-evs in https://github.com/datalab-org/datalab/pull/825

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.4.2...v0.4.3

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.4.2

This release adds an update to the batch item creation UI to include other item types, and includes a new preview of the tabular UI which can be accessed at the path /next, as well as several UI tweaks and fixes.

What's Changed

Rebrand repo to the group-agnostic gh organisation by @ml-evs in https://github.com/datalab-org/datalab/pull/809
Change docker compose restart policy to "unless-stopped" by @ml-evs in https://github.com/datalab-org/datalab/pull/810
Update INSTALL.md by @jdbocarsly in https://github.com/datalab-org/datalab/pull/816
Fix logo link taking full screen width by @ml-evs in https://github.com/datalab-org/datalab/pull/821
Improve sample table component by @BenjaminCharmes in https://github.com/datalab-org/datalab/pull/784
Add simple component test for ChemFormInput by @ml-evs in https://github.com/datalab-org/datalab/pull/743
Add ability to add batch of cells by @jdbocarsly in https://github.com/datalab-org/datalab/pull/797
Add config options to automatically activate accounts from GitHub, email or any auth source by @ml-evs in https://github.com/datalab-org/datalab/pull/822
Bump version number to 0.4.2 by @ml-evs in https://github.com/datalab-org/datalab/pull/824

Full Changelog: https://github.com/datalab-org/datalab/compare/v0.4.1...v0.4.2

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.4.1

This minor release adds some quality-of-life fixes to the UI, a new cell format type "in situ (optical)" and tweaks to our development workflow.

What's Changed

Run vue3-recommended linting by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/756
Corrected blockInfo computed property value by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/775
Changes to pre-commit by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/785
Add 'optical' cellFormat by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/788
Remove cheminventory import task (which is now in datalab-api) by @ml-evs in https://github.com/the-grey-group/datalab/pull/793
Add gpt4o and other updated models by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/736
Report runtime server config at /info and use this in UI by @ml-evs in https://github.com/the-grey-group/datalab/pull/801
Development docker, pre-commit and eslint updates & refactoring by @ml-evs in https://github.com/the-grey-group/datalab/pull/805
Disable ChemicalFormula component by @ml-evs in https://github.com/the-grey-group/datalab/pull/806

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.4.0...v0.4.1

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.4.0

This release of datalab contains significant new functionality whilst broadly maintaining compatibility with the 0.3.x series.

It is also accompanied by the first release of the datalab Python API package (https://github.com/datalab-org/datalab-api), as well as the first release of the Ansible playbooks and Terraform rules (Azure only, for now) to automated datalab deployments (https://github.com/datalab-org/datalab-ansible-terraform).

Special thanks go to @vrajpatel9988 and especially @BenjaminCharmes who both made their first contributions to datalab in this release!

Highlights

User accounts: users can now update their name and contact info, as well as connect external accounts and regenerate API keys directly from the web UI. The ability to login via ORCID is now enabled by default (but must be configured at the instance level).
Admin dashboard: adds the ability for admins to do user management from the UI directly.
Electrochemistry block: support for Neware file formats, MPR files written by ECLab > 11.50 and cyclic voltammetry data.
Equipment: A new entry type has been added to record the equipment in the lab used for certain operations
Better default permissions on inventories: users can now create and edit inventory entries without requiring an admin.
Automatic random IDs: The ability to generate random IDs for new samples was added, allowing datalab to be used as the source of IDs.
Enhanced block-level documentation in the UI, and dynamic syncing of block-type metadata for improved extensibility.
Added the admin ability to verify all user accounts before they can use datalab.
General improvements to block error reporting and reactivity, as well as several bug fixes.

Notes for upgrading to v0.4.0

Users now have an "unverified" status by default. For some deployments, this may require an admin to first self-verify their account directly with a database update ("account_status" -> "active"), after which they can verify all other users in the UI.
The data mount point of the database container in the default ./docker-compose.yml has changed to use /data/db on the host system. Deployments using this configuration should be careful to backup and restore from their existing database, or continue to use the docker volume approach (feel free to raise an issue with any questions).
Similarly, the development set up has changed slightly and may need to be remade after upgrading.

What's Changed

Dynamically set production app container config in entrypoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/605
Visual style improvements, test updates and improved block UI by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/608
Refactor mail config settings by @ml-evs in https://github.com/the-grey-group/datalab/pull/614
Add Neware support and fix MPR issue by @ml-evs in https://github.com/the-grey-group/datalab/pull/617
Hotfix for block errors and warnings UI that arise over multiple renderings by @ml-evs in https://github.com/the-grey-group/datalab/pull/615
Use newly released galvani and NewareNDA packages by @ml-evs in https://github.com/the-grey-group/datalab/pull/625
Update xrdml parser so it works with v2.0 by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/631
Restrict relationship types in UI synthesis and constituents tables by @ml-evs in https://github.com/the-grey-group/datalab/pull/630
Update copyright year in LICENSE by @ml-evs in https://github.com/the-grey-group/datalab/pull/622
Allow browser context menu in tinymce fields by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/635
Allow any authenticated user to generate an API key by @ml-evs in https://github.com/the-grey-group/datalab/pull/641
Serve the identifier prefix in the /info response by @ml-evs in https://github.com/the-grey-group/datalab/pull/638
Return user role from /get-current-user endpoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/644
Created component for editing account settings by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/627
User registration: default display name to GitHub username when no profile name is set by @ml-evs in https://github.com/the-grey-group/datalab/pull/655
Fix typo where CI tests were never run in chrome by @ml-evs in https://github.com/the-grey-group/datalab/pull/656
Temporarily disable Firefox tests by @ml-evs in https://github.com/the-grey-group/datalab/pull/659
Bump webpack-dev-middleware from 5.3.3 to 5.3.4 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/660
Bump follow-redirects from 1.15.4 to 1.15.6 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/647
Allow echem block to plot non-cyclic data by @ml-evs in https://github.com/the-grey-group/datalab/pull/665
Add optional functionality to add starting materials from within the webapp by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/642
Added validation for the user update route/UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/646
Improve block warning/error reactivity in the UI by @ml-evs in https://github.com/the-grey-group/datalab/pull/666
Add ability to generate .csv files within block callbacks by @ml-evs in https://github.com/the-grey-group/datalab/pull/621
Debug flaky e2e tests by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/670
Add option to generate ID automatically when creating items by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/668
Add default config for VUE_APP_EDITABLE_INVENTORY by @ml-evs in https://github.com/the-grey-group/datalab/pull/673
Add codecov upload to CI by @ml-evs in https://github.com/the-grey-group/datalab/pull/677
Disable codecov PR annotations by @ml-evs in https://github.com/the-grey-group/datalab/pull/681
Add "equipment" item type by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/531
Convert Whinchat to use langchain by @vrajpatel9988 in https://github.com/the-grey-group/datalab/pull/661
Bump langchain-core from 0.1.33 to 0.1.35 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/686
Bump prettier, pre-commit hooks and some other deps by @ml-evs in https://github.com/the-grey-group/datalab/pull/685
Allow starting materials and equipment to be edited by normal users by @ml-evs in https://github.com/the-grey-group/datalab/pull/672
Bump pymongo from 4.6.2 to 4.6.3 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/689
Use mocked API keys in API tests to fake different authentication scenarios by @ml-evs in https://github.com/the-grey-group/datalab/pull/676
Significant refactor of deployment docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/690
Enable ORCID connection by default by @ml-evs in https://github.com/the-grey-group/datalab/pull/693
Only fix PRs with pre-commit CI when asked by @ml-evs in https://github.com/the-grey-group/datalab/pull/697
Upgrade cypress and other testing deps to allow Firefox testing by @ml-evs in https://github.com/the-grey-group/datalab/pull/699
Update README with links to Python API by @ml-evs in https://github.com/the-grey-group/datalab/pull/701
Add public deployment badge in README by @ml-evs in https://github.com/the-grey-group/datalab/pull/702
Separate each browser test into separate run and temporarily disable Firefox by @ml-evs in https://github.com/the-grey-group/datalab/pull/703
Add admin dashboard with user management controls by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/674
Added a way to refresh API Key from Account Settings UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/700
Recreate user index with new settings if already existing by @ml-evs in https://github.com/the-grey-group/datalab/pull/707
Fix for saving collection blocks and error handling for excessively large blocks by @ml-evs in https://github.com/the-grey-group/datalab/pull/709
Add account_status field (active, unverified or deactivated) to People model by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/687
Update deployment instructions wrt. new datalab-ansible-terraform repo by @ml-evs in https://github.com/the-grey-group/datalab/pull/712
Add UI for email registration/login by @ml-evs in https://github.com/the-grey-group/datalab/pull/528
Serve data about available block types in API by @ml-evs in https://github.com/the-grey-group/datalab/pull/667
Add upper pin to rosettasciio by @ml-evs in https://github.com/the-grey-group/datalab/pull/720
Update tests for current user by @ml-evs in https://github.com/the-grey-group/datalab/pull/723
Add ability to select between different chat models in the whinchat by @vrajpatel9988 in https://github.com/the-grey-group/datalab/pull/680
Bump Flask and Werkzeug to the latest releases on the v3 series by @ml-evs in https://github.com/the-grey-group/datalab/pull/722
Added HelpBubble component to display inline documentation in the UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/706
Fix API key help message by @ml-evs in https://github.com/the-grey-group/datalab/pull/725
Fix README badges by @ml-evs in https://github.com/the-grey-group/datalab/pull/730
[pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/the-grey-group/datalab/pull/728
Revert pre-commit autoupdate for prettier by @ml-evs in https://github.com/the-grey-group/datalab/pull/734
Populating dynamic block-level documentation as UI tooltips by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/719
Make account status on registration be configurable by provider by @ml-evs in https://github.com/the-grey-group/datalab/pull/733
Add notification-dot for user with unverified account_status by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/724
Consider account status during auth and refactor API around blueprints by @ml-evs in https://github.com/the-grey-group/datalab/pull/727
Add gravatar instructions and tweak account settings modal by @ml-evs in https://github.com/the-grey-group/datalab/pull/744
Add block help to block title by @ml-evs in https://github.com/the-grey-group/datalab/pull/737
Fix NMR block layout issue by @ml-evs in https://github.com/the-grey-group/datalab/pull/745
Fix issue with landing page and tweak default docker-compose deployment by @ml-evs in https://github.com/the-grey-group/datalab/pull/746
Improve admin dashboard styling and functionality by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/748
Add API_URL as a meta tag in HTML header of all UI responses by @ml-evs in https://github.com/the-grey-group/datalab/pull/750
Add CONFIG.APP_URL to allow for customisable redirects on login/registration by @ml-evs in https://github.com/the-grey-group/datalab/pull/749
Fix StyledInput component (v2) by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/751
Bump version numbers by @ml-evs in https://github.com/the-grey-group/datalab/pull/753
Add a Tabular data block that can handle simple CSVs and text files by @ml-evs in https://github.com/the-grey-group/datalab/pull/592
Remove GET-out of route permissions by @ml-evs in https://github.com/the-grey-group/datalab/pull/754
Tweak mount points, production Docker entrypoint and development environment by @ml-evs in https://github.com/the-grey-group/datalab/pull/763
Default to ORCID ID as display name when ORCID user's name is private by @ml-evs in https://github.com/the-grey-group/datalab/pull/769
Add process lock for remote filesystem scraper by @ml-evs in https://github.com/the-grey-group/datalab/pull/562
Bump version number to v0.4.0 by @ml-evs in https://github.com/the-grey-group/datalab/pull/770
Follow new auth requirements in UI tables by @ml-evs in https://github.com/the-grey-group/datalab/pull/771
Add CHANGELOG to repo and docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/772
Update a few (midly) insecure deps by @ml-evs in https://github.com/the-grey-group/datalab/pull/774

New Contributors

@BenjaminCharmes made their first contribution in https://github.com/the-grey-group/datalab/pull/627
@vrajpatel9988 made their first contribution in https://github.com/the-grey-group/datalab/pull/661

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.3.2...v0.4.0

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.4.0-rc.4

:construction: PRE-RELEASE :construction: This is the FINAL pre-release for the upcoming 0.4.0 release. The CHANGELOG below may be missing some information. It is not recommended that you update to this pre-release unless you have a good reason, or want to test new features before they are finished.

This release of datalab contains significant new functionality whilst broadly maintaining compatibility with the 0.3.x series.

Special thanks go to @BenjaminCharmes and @vrajpatel9988 who made their first contributions to datalab in this release!

Highlights

User accounts: users can now update their name and contact info, as well as connect external accounts and regenerate API keys directly from the web UI. The ability to login via ORCID is now enabled by default (but must be configured at the instance level).
Admin dashboard: adds the ability for admins to do user management from the UI directly.
Electrochemistry block: support for Neware file formats, MPR files written by ECLab > 11.50 and cyclic voltammetry data.
Equipment: A new entry type has been added to record the equipment in the lab used for certain operations
Better default permissions on inventories: users can now create and edit inventory entries without requiring an admin.
Automatic random IDs: The ability to generate random IDs for new samples was added, allowing datalab to be used as the source of IDs.
Enhanced block-level documentation in the UI, and dynamic syncing of block-type metadata for improved extensibility.
Added the admin ability to verify all user accounts before they can use datalab.
General improvements to block error reporting and reactivity, as well as several bug fixes.

Notes for upgrading to v0.4.0

These notes will be populated for the final release, but not yet.

Full changelog

Improve admin dashboard styling and functionality by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/748
Add API_URL as a meta tag in HTML header of all UI responses by @ml-evs in https://github.com/the-grey-group/datalab/pull/750
Add CONFIG.APP_URL to allow for customisable redirects on login/registration by @ml-evs in https://github.com/the-grey-group/datalab/pull/749
Fix StyledInput component (v2) by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/751
Bump version numbers by @ml-evs in https://github.com/the-grey-group/datalab/pull/753
Dynamically set production app container config in entrypoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/605
Visual style improvements, test updates and improved block UI by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/608
Refactor mail config settings by @ml-evs in https://github.com/the-grey-group/datalab/pull/614
Add Neware support and fix MPR issue by @ml-evs in https://github.com/the-grey-group/datalab/pull/617
Hotfix for block errors and warnings UI that arise over multiple renderings by @ml-evs in https://github.com/the-grey-group/datalab/pull/615
Use newly released galvani and NewareNDA packages by @ml-evs in https://github.com/the-grey-group/datalab/pull/625
Update xrdml parser so it works with v2.0 by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/631
Restrict relationship types in UI synthesis and constituents tables by @ml-evs in https://github.com/the-grey-group/datalab/pull/630
Update copyright year in LICENSE by @ml-evs in https://github.com/the-grey-group/datalab/pull/622
Allow browser context menu in tinymce fields by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/635
Allow any authenticated user to generate an API key by @ml-evs in https://github.com/the-grey-group/datalab/pull/641
Serve the identifier prefix in the /info response by @ml-evs in https://github.com/the-grey-group/datalab/pull/638
Return user role from /get-current-user endpoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/644
Created component for editing account settings by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/627
User registration: default display name to GitHub username when no profile name is set by @ml-evs in https://github.com/the-grey-group/datalab/pull/655
Fix typo where CI tests were never run in chrome by @ml-evs in https://github.com/the-grey-group/datalab/pull/656
Temporarily disable Firefox tests by @ml-evs in https://github.com/the-grey-group/datalab/pull/659
Bump webpack-dev-middleware from 5.3.3 to 5.3.4 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/660
Bump follow-redirects from 1.15.4 to 1.15.6 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/647
Allow echem block to plot non-cyclic data by @ml-evs in https://github.com/the-grey-group/datalab/pull/665
Add optional functionality to add starting materials from within the webapp by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/642
Added validation for the user update route/UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/646
Improve block warning/error reactivity in the UI by @ml-evs in https://github.com/the-grey-group/datalab/pull/666
Add ability to generate .csv files within block callbacks by @ml-evs in https://github.com/the-grey-group/datalab/pull/621
Debug flaky e2e tests by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/670
Add option to generate ID automatically when creating items by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/668
Add default config for VUE_APP_EDITABLE_INVENTORY by @ml-evs in https://github.com/the-grey-group/datalab/pull/673
Add codecov upload to CI by @ml-evs in https://github.com/the-grey-group/datalab/pull/677
Disable codecov PR annotations by @ml-evs in https://github.com/the-grey-group/datalab/pull/681
Add "equipment" item type by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/531
Convert Whinchat to use langchain by @vrajpatel9988 in https://github.com/the-grey-group/datalab/pull/661
Bump langchain-core from 0.1.33 to 0.1.35 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/686
Bump prettier, pre-commit hooks and some other deps by @ml-evs in https://github.com/the-grey-group/datalab/pull/685
Allow starting materials and equipment to be edited by normal users by @ml-evs in https://github.com/the-grey-group/datalab/pull/672
Bump pymongo from 4.6.2 to 4.6.3 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/689
Use mocked API keys in API tests to fake different authentication scenarios by @ml-evs in https://github.com/the-grey-group/datalab/pull/676
Significant refactor of deployment docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/690
Enable ORCID connection by default by @ml-evs in https://github.com/the-grey-group/datalab/pull/693
Only fix PRs with pre-commit CI when asked by @ml-evs in https://github.com/the-grey-group/datalab/pull/697
Upgrade cypress and other testing deps to allow Firefox testing by @ml-evs in https://github.com/the-grey-group/datalab/pull/699
Update README with links to Python API by @ml-evs in https://github.com/the-grey-group/datalab/pull/701
Add public deployment badge in README by @ml-evs in https://github.com/the-grey-group/datalab/pull/702
Separate each browser test into separate run and temporarily disable Firefox by @ml-evs in https://github.com/the-grey-group/datalab/pull/703
Add admin dashboard with user management controls by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/674
Added a way to refresh API Key from Account Settings UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/700
Recreate user index with new settings if already existing by @ml-evs in https://github.com/the-grey-group/datalab/pull/707
Fix for saving collection blocks and error handling for excessively large blocks by @ml-evs in https://github.com/the-grey-group/datalab/pull/709
Add account_status field (active, unverified or deactivated) to People model by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/687
Update deployment instructions wrt. new datalab-ansible-terraform repo by @ml-evs in https://github.com/the-grey-group/datalab/pull/712
Add UI for email registration/login by @ml-evs in https://github.com/the-grey-group/datalab/pull/528
Serve data about available block types in API by @ml-evs in https://github.com/the-grey-group/datalab/pull/667
Add upper pin to rosettasciio by @ml-evs in https://github.com/the-grey-group/datalab/pull/720
Update tests for current user by @ml-evs in https://github.com/the-grey-group/datalab/pull/723
Add ability to select between different chat models in the whinchat by @vrajpatel9988 in https://github.com/the-grey-group/datalab/pull/680
Bump Flask and Werkzeug to the latest releases on the v3 series by @ml-evs in https://github.com/the-grey-group/datalab/pull/722
Added HelpBubble component to display inline documentation in the UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/706
Fix API key help message by @ml-evs in https://github.com/the-grey-group/datalab/pull/725
Fix README badges by @ml-evs in https://github.com/the-grey-group/datalab/pull/730
Revert pre-commit autoupdate for prettier by @ml-evs in https://github.com/the-grey-group/datalab/pull/734
Populating dynamic block-level documentation as UI tooltips by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/719
Make account status on registration be configurable by provider by @ml-evs in https://github.com/the-grey-group/datalab/pull/733
Add notification-dot for user with unverified account_status by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/724
Consider account status during auth and refactor API around blueprints by @ml-evs in https://github.com/the-grey-group/datalab/pull/727
Add gravatar instructions and tweak account settings modal by @ml-evs in https://github.com/the-grey-group/datalab/pull/744
Add block help to block title by @ml-evs in https://github.com/the-grey-group/datalab/pull/737
Fix NMR block layout issue by @ml-evs in https://github.com/the-grey-group/datalab/pull/745
Fix issue with landing page and tweak default docker-compose deployment by @ml-evs in https://github.com/the-grey-group/datalab/pull/746

New Contributors

@BenjaminCharmes made their first contribution in https://github.com/the-grey-group/datalab/pull/627
@vrajpatel9988 made their first contribution in https://github.com/the-grey-group/datalab/pull/661

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.3.2...v0.4.0-rc.4

- Python
Published by ml-evs over 1 year ago

datalab-server - v0.4.0-rc.3

:construction: PRE-RELEASE :construction: This is the pre-release for the upcoming 0.4.0 release. The CHANGELOG below may be missing some information. It is not recommended that you update to this pre-release unless you have a good reason, or want to test new features before they are finished.

This release of datalab contains significant new functionality whilst broadly maintaining compatibility with the 0.3.x series.

Special thanks go to @BenjaminCharmes and @vrajpatel9988 who made their first contributions to datalab in this release!

Highlights

User accounts: users can now update their name and contact info, as well as connect external accounts and regenerate API keys directly from the web UI. The ability to login via ORCID is now enabled by default (but must be configured at the instance level).
Admin dashboard: adds the ability for admins to do user management from the UI directly.
Electrochemistry block: support for Neware file formats, MPR files written by ECLab > 11.50 and cyclic voltammetry data.
Equipment: A new entry type has been added to record the equipment in the lab used for certain operations
Better default permissions on inventories: users can now create and edit inventory entries without requiring an admin.
Automatic random IDs: The ability to generate random IDs for new samples was added, allowing datalab to be used as the source of IDs.
Enhanced block-level documentation in the UI, and dynamic syncing of block-type metadata for improved extensibility.
Added the admin ability to verify all user accounts before they can use datalab.
General improvements to block error reporting and reactivity, as well as several bug fixes.

Notes for upgrading to v0.4.0

These notes will be populated for the final release, but not yet.

Full changelog

Dynamically set production app container config in entrypoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/605
Visual style improvements, test updates and improved block UI by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/608
Refactor mail config settings by @ml-evs in https://github.com/the-grey-group/datalab/pull/614
Add Neware support and fix MPR issue by @ml-evs in https://github.com/the-grey-group/datalab/pull/617
Hotfix for block errors and warnings UI that arise over multiple renderings by @ml-evs in https://github.com/the-grey-group/datalab/pull/615
Use newly released galvani and NewareNDA packages by @ml-evs in https://github.com/the-grey-group/datalab/pull/625
Update xrdml parser so it works with v2.0 by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/631
Restrict relationship types in UI synthesis and constituents tables by @ml-evs in https://github.com/the-grey-group/datalab/pull/630
Update copyright year in LICENSE by @ml-evs in https://github.com/the-grey-group/datalab/pull/622
Allow browser context menu in tinymce fields by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/635
Allow any authenticated user to generate an API key by @ml-evs in https://github.com/the-grey-group/datalab/pull/641
Serve the identifier prefix in the /info response by @ml-evs in https://github.com/the-grey-group/datalab/pull/638
Return user role from /get-current-user endpoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/644
Created component for editing account settings by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/627
User registration: default display name to GitHub username when no profile name is set by @ml-evs in https://github.com/the-grey-group/datalab/pull/655
Fix typo where CI tests were never run in chrome by @ml-evs in https://github.com/the-grey-group/datalab/pull/656
Temporarily disable Firefox tests by @ml-evs in https://github.com/the-grey-group/datalab/pull/659
Bump webpack-dev-middleware from 5.3.3 to 5.3.4 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/660
Bump follow-redirects from 1.15.4 to 1.15.6 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/647
Allow echem block to plot non-cyclic data by @ml-evs in https://github.com/the-grey-group/datalab/pull/665
Add optional functionality to add starting materials from within the webapp by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/642
Added validation for the user update route/UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/646
Improve block warning/error reactivity in the UI by @ml-evs in https://github.com/the-grey-group/datalab/pull/666
Add ability to generate .csv files within block callbacks by @ml-evs in https://github.com/the-grey-group/datalab/pull/621
Debug flaky e2e tests by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/670
Add option to generate ID automatically when creating items by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/668
Add default config for VUE_APP_EDITABLE_INVENTORY by @ml-evs in https://github.com/the-grey-group/datalab/pull/673
Add codecov upload to CI by @ml-evs in https://github.com/the-grey-group/datalab/pull/677
Disable codecov PR annotations by @ml-evs in https://github.com/the-grey-group/datalab/pull/681
Add "equipment" item type by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/531
Convert Whinchat to use langchain by @vrajpatel9988 in https://github.com/the-grey-group/datalab/pull/661
Bump langchain-core from 0.1.33 to 0.1.35 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/686
Bump prettier, pre-commit hooks and some other deps by @ml-evs in https://github.com/the-grey-group/datalab/pull/685
Allow starting materials and equipment to be edited by normal users by @ml-evs in https://github.com/the-grey-group/datalab/pull/672
Bump pymongo from 4.6.2 to 4.6.3 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/689
Use mocked API keys in API tests to fake different authentication scenarios by @ml-evs in https://github.com/the-grey-group/datalab/pull/676
Significant refactor of deployment docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/690
Enable ORCID connection by default by @ml-evs in https://github.com/the-grey-group/datalab/pull/693
Only fix PRs with pre-commit CI when asked by @ml-evs in https://github.com/the-grey-group/datalab/pull/697
Upgrade cypress and other testing deps to allow Firefox testing by @ml-evs in https://github.com/the-grey-group/datalab/pull/699
Update README with links to Python API by @ml-evs in https://github.com/the-grey-group/datalab/pull/701
Add public deployment badge in README by @ml-evs in https://github.com/the-grey-group/datalab/pull/702
Separate each browser test into separate run and temporarily disable Firefox by @ml-evs in https://github.com/the-grey-group/datalab/pull/703
Add admin dashboard with user management controls by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/674
Added a way to refresh API Key from Account Settings UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/700
Recreate user index with new settings if already existing by @ml-evs in https://github.com/the-grey-group/datalab/pull/707
Fix for saving collection blocks and error handling for excessively large blocks by @ml-evs in https://github.com/the-grey-group/datalab/pull/709
Add account_status field (active, unverified or deactivated) to People model by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/687
Update deployment instructions wrt. new datalab-ansible-terraform repo by @ml-evs in https://github.com/the-grey-group/datalab/pull/712
Add UI for email registration/login by @ml-evs in https://github.com/the-grey-group/datalab/pull/528
Serve data about available block types in API by @ml-evs in https://github.com/the-grey-group/datalab/pull/667
Add upper pin to rosettasciio by @ml-evs in https://github.com/the-grey-group/datalab/pull/720
Update tests for current user by @ml-evs in https://github.com/the-grey-group/datalab/pull/723
Add ability to select between different chat models in the whinchat by @vrajpatel9988 in https://github.com/the-grey-group/datalab/pull/680
Bump Flask and Werkzeug to the latest releases on the v3 series by @ml-evs in https://github.com/the-grey-group/datalab/pull/722
Added HelpBubble component to display inline documentation in the UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/706
Fix API key help message by @ml-evs in https://github.com/the-grey-group/datalab/pull/725
Fix README badges by @ml-evs in https://github.com/the-grey-group/datalab/pull/730
Revert pre-commit autoupdate for prettier by @ml-evs in https://github.com/the-grey-group/datalab/pull/734
Populating dynamic block-level documentation as UI tooltips by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/719
Make account status on registration be configurable by provider by @ml-evs in https://github.com/the-grey-group/datalab/pull/733
Add notification-dot for user with unverified account_status by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/724
Consider account status during auth and refactor API around blueprints by @ml-evs in https://github.com/the-grey-group/datalab/pull/727
Add gravatar instructions and tweak account settings modal by @ml-evs in https://github.com/the-grey-group/datalab/pull/744
Add block help to block title by @ml-evs in https://github.com/the-grey-group/datalab/pull/737
Fix NMR block layout issue by @ml-evs in https://github.com/the-grey-group/datalab/pull/745
Fix issue with landing page and tweak default docker-compose deployment by @ml-evs in https://github.com/the-grey-group/datalab/pull/746

New Contributors

@BenjaminCharmes made their first contribution in https://github.com/the-grey-group/datalab/pull/627
@vrajpatel9988 made their first contribution in https://github.com/the-grey-group/datalab/pull/661

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.3.2...v0.4.0-rc.3

- Python
Published by ml-evs almost 2 years ago

datalab-server - v0.4.0-rc.2

:construction: PRE-RELEASE :construction: This is the pre-release for the upcoming 0.4.0 release. The CHANGELOG below may be missing some information. It is not recommended that you update to this pre-release unless you have a good reason, or want to test new features before they are finished.

This release of datalab contains significant new functionality whilst broadly maintaining compatibility with the 0.3.x series.

Special thanks go to @BenjaminCharmes and @vrajpatel9988 who made their first contributions to datalab in this release!

Highlights

User accounts: users can now update their name and contact info, as well as connect external accounts and regenerate API keys directly from the web UI. The ability to login via ORCID is now enabled by default (but must be configured at the instance level).
Admin dashboard: adds the ability for admins to do user management from the UI directly.
Electrochemistry block: support for Neware file formats, MPR files written by ECLab > 11.50 and cyclic voltammetry data.
Equipment: A new entry type has been added to record the equipment in the lab used for certain operations
Better default permissions on inventories: users can now create and edit inventory entries without requiring an admin.
Automatic random IDs: The ability to generate random IDs for new samples was added, allowing datalab to be used as the source of IDs.
General improvements to block error reporting and reactivity, as well as several bug fixes.

Notes for upgrading to v0.4.0

These notes will be populated for the final release, but not yet.

Full changelog

Dynamically set production app container config in entrypoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/605
Visual style improvements, test updates and improved block UI by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/608
Refactor mail config settings by @ml-evs in https://github.com/the-grey-group/datalab/pull/614
Add Neware support and fix MPR issue by @ml-evs in https://github.com/the-grey-group/datalab/pull/617
Hotfix for block errors and warnings UI that arise over multiple renderings by @ml-evs in https://github.com/the-grey-group/datalab/pull/615
Use newly released galvani and NewareNDA packages by @ml-evs in https://github.com/the-grey-group/datalab/pull/625
Update xrdml parser so it works with v2.0 by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/631
Restrict relationship types in UI synthesis and constituents tables by @ml-evs in https://github.com/the-grey-group/datalab/pull/630
Update copyright year in LICENSE by @ml-evs in https://github.com/the-grey-group/datalab/pull/622
Allow browser context menu in tinymce fields by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/635
Allow any authenticated user to generate an API key by @ml-evs in https://github.com/the-grey-group/datalab/pull/641
Serve the identifier prefix in the /info response by @ml-evs in https://github.com/the-grey-group/datalab/pull/638
Return user role from /get-current-user endpoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/644
Created component for editing account settings by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/627
User registration: default display name to GitHub username when no profile name is set by @ml-evs in https://github.com/the-grey-group/datalab/pull/655
Fix typo where CI tests were never run in chrome by @ml-evs in https://github.com/the-grey-group/datalab/pull/656
Temporarily disable Firefox tests by @ml-evs in https://github.com/the-grey-group/datalab/pull/659
Bump webpack-dev-middleware from 5.3.3 to 5.3.4 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/660
Bump follow-redirects from 1.15.4 to 1.15.6 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/647
Allow echem block to plot non-cyclic data by @ml-evs in https://github.com/the-grey-group/datalab/pull/665
Add optional functionality to add starting materials from within the webapp by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/642
Added validation for the user update route/UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/646
Improve block warning/error reactivity in the UI by @ml-evs in https://github.com/the-grey-group/datalab/pull/666
Add ability to generate .csv files within block callbacks by @ml-evs in https://github.com/the-grey-group/datalab/pull/621
Debug flaky e2e tests by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/670
Add option to generate ID automatically when creating items by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/668
Add default config for VUE_APP_EDITABLE_INVENTORY by @ml-evs in https://github.com/the-grey-group/datalab/pull/673
Add codecov upload to CI by @ml-evs in https://github.com/the-grey-group/datalab/pull/677
Disable codecov PR annotations by @ml-evs in https://github.com/the-grey-group/datalab/pull/681
Add "equipment" item type by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/531
Convert Whinchat to use langchain by @vrajpatel9988 in https://github.com/the-grey-group/datalab/pull/661
Bump langchain-core from 0.1.33 to 0.1.35 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/686
Bump prettier, pre-commit hooks and some other deps by @ml-evs in https://github.com/the-grey-group/datalab/pull/685
Allow starting materials and equipment to be edited by normal users by @ml-evs in https://github.com/the-grey-group/datalab/pull/672
Bump pymongo from 4.6.2 to 4.6.3 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/689
Use mocked API keys in API tests to fake different authentication scenarios by @ml-evs in https://github.com/the-grey-group/datalab/pull/676
Significant refactor of deployment docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/690
Enable ORCID connection by default by @ml-evs in https://github.com/the-grey-group/datalab/pull/693
Only fix PRs with pre-commit CI when asked by @ml-evs in https://github.com/the-grey-group/datalab/pull/697
Upgrade cypress and other testing deps to allow Firefox testing by @ml-evs in https://github.com/the-grey-group/datalab/pull/699
Update README with links to Python API by @ml-evs in https://github.com/the-grey-group/datalab/pull/701
Add public deployment badge in README by @ml-evs in https://github.com/the-grey-group/datalab/pull/702
Separate each browser test into separate run and temporarily disable Firefox by @ml-evs in https://github.com/the-grey-group/datalab/pull/703
Add admin dashboard with user management controls by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/674
Added a way to refresh API Key from Account Settings UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/700
Recreate user index with new settings if already existing by @ml-evs in https://github.com/the-grey-group/datalab/pull/707
Fix for saving collection blocks and error handling for excessively large blocks by @ml-evs in https://github.com/the-grey-group/datalab/pull/709
Add account_status field (active, unverified or deactivated) to People model by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/687
Update deployment instructions wrt. new datalab-ansible-terraform repo by @ml-evs in https://github.com/the-grey-group/datalab/pull/712
Add UI for email registration/login by @ml-evs in https://github.com/the-grey-group/datalab/pull/528
Serve data about available block types in API by @ml-evs in https://github.com/the-grey-group/datalab/pull/667
Add upper pin to rosettasciio by @ml-evs in https://github.com/the-grey-group/datalab/pull/720
Update tests for current user by @ml-evs in https://github.com/the-grey-group/datalab/pull/723
Add ability to select between different chat models in the whinchat by @vrajpatel9988 in https://github.com/the-grey-group/datalab/pull/680
Bump Flask and Werkzeug to the latest releases on the v3 series by @ml-evs in https://github.com/the-grey-group/datalab/pull/722
Added HelpBubble component to display inline documentation in the UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/706
Fix API key help message by @ml-evs in https://github.com/the-grey-group/datalab/pull/725
Fix README badges by @ml-evs in https://github.com/the-grey-group/datalab/pull/730

New Contributors

@BenjaminCharmes made their first contribution in https://github.com/the-grey-group/datalab/pull/627
@vrajpatel9988 made their first contribution in https://github.com/the-grey-group/datalab/pull/661

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.3.2...v0.4.0-rc.2

- Python
Published by ml-evs almost 2 years ago

datalab-server - v0.4.0-rc.1

:construction: PRE-RELEASE :construction: This is the pre-release for the upcoming 0.4.0 release. The CHANGELOG below may be missing some information. It is not recommended that you update to this pre-release unless you have a good reason, or want to test new features before they are finished.

This release of datalab contains significant new functionality whilst broadly maintaining compatibility with the 0.3.x series.

Special thanks go to @BenjaminCharmes and @vrajpatel9988 who made their first contributions to datalab in this release!

Highlights

User accounts: users can now update their name and contact info, as well as connect external accounts and regenerate API keys directly from the web UI. The ability to login via ORCID is now enabled by default (but must be configured at the instance level).
Admin dashboard: adds the ability for admins to do user management from the UI directly.
Electrochemistry block: support for Neware file formats, MPR files written by ECLab > 11.50 and cyclic voltammetry data.
Equipment: A new entry type has been added to record the equipment in the lab used for certain operations
Better default permissions on inventories: users can now create and edit inventory entries without requiring an admin.
Automatic random IDs: The ability to generate random IDs for new samples was added, allowing datalab to be used as the source of IDs.
General improvements to block error reporting and reactivity, as well as several bug fixes.

Notes for upgrading to v0.4.0

These notes will be populated for the final release, but not yet.

Full changelog

Dynamically set production app container config in entrypoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/605
Visual style improvements, test updates and improved block UI by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/608
Refactor mail config settings by @ml-evs in https://github.com/the-grey-group/datalab/pull/614
Add Neware support and fix MPR issue by @ml-evs in https://github.com/the-grey-group/datalab/pull/617
Hotfix for block errors and warnings UI that arise over multiple renderings by @ml-evs in https://github.com/the-grey-group/datalab/pull/615
Use newly released galvani and NewareNDA packages by @ml-evs in https://github.com/the-grey-group/datalab/pull/625
Update xrdml parser so it works with v2.0 by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/631
Restrict relationship types in UI synthesis and constituents tables by @ml-evs in https://github.com/the-grey-group/datalab/pull/630
Update copyright year in LICENSE by @ml-evs in https://github.com/the-grey-group/datalab/pull/622
Allow browser context menu in tinymce fields by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/635
Allow any authenticated user to generate an API key by @ml-evs in https://github.com/the-grey-group/datalab/pull/641
Serve the identifier prefix in the /info response by @ml-evs in https://github.com/the-grey-group/datalab/pull/638
Return user role from /get-current-user endpoint by @ml-evs in https://github.com/the-grey-group/datalab/pull/644
Created component for editing account settings by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/627
User registration: default display name to GitHub username when no profile name is set by @ml-evs in https://github.com/the-grey-group/datalab/pull/655
Fix typo where CI tests were never run in chrome by @ml-evs in https://github.com/the-grey-group/datalab/pull/656
Temporarily disable Firefox tests by @ml-evs in https://github.com/the-grey-group/datalab/pull/659
Bump webpack-dev-middleware from 5.3.3 to 5.3.4 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/660
Bump follow-redirects from 1.15.4 to 1.15.6 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/647
Allow echem block to plot non-cyclic data by @ml-evs in https://github.com/the-grey-group/datalab/pull/665
Add optional functionality to add starting materials from within the webapp by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/642
Added validation for the user update route/UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/646
Improve block warning/error reactivity in the UI by @ml-evs in https://github.com/the-grey-group/datalab/pull/666
Add ability to generate .csv files within block callbacks by @ml-evs in https://github.com/the-grey-group/datalab/pull/621
Debug flaky e2e tests by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/670
Add option to generate ID automatically when creating items by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/668
Add default config for VUE_APP_EDITABLE_INVENTORY by @ml-evs in https://github.com/the-grey-group/datalab/pull/673
Add codecov upload to CI by @ml-evs in https://github.com/the-grey-group/datalab/pull/677
Disable codecov PR annotations by @ml-evs in https://github.com/the-grey-group/datalab/pull/681
Add "equipment" item type by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/531
Convert Whinchat to use langchain by @vrajpatel9988 in https://github.com/the-grey-group/datalab/pull/661
Bump langchain-core from 0.1.33 to 0.1.35 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/686
Bump prettier, pre-commit hooks and some other deps by @ml-evs in https://github.com/the-grey-group/datalab/pull/685
Allow starting materials and equipment to be edited by normal users by @ml-evs in https://github.com/the-grey-group/datalab/pull/672
Bump pymongo from 4.6.2 to 4.6.3 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/689
Use mocked API keys in API tests to fake different authentication scenarios by @ml-evs in https://github.com/the-grey-group/datalab/pull/676
Significant refactor of deployment docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/690
Enable ORCID connection by default by @ml-evs in https://github.com/the-grey-group/datalab/pull/693
Only fix PRs with pre-commit CI when asked by @ml-evs in https://github.com/the-grey-group/datalab/pull/697
Upgrade cypress and other testing deps to allow Firefox testing by @ml-evs in https://github.com/the-grey-group/datalab/pull/699
Update README with links to Python API by @ml-evs in https://github.com/the-grey-group/datalab/pull/701
Add public deployment badge in README by @ml-evs in https://github.com/the-grey-group/datalab/pull/702
Separate each browser test into separate run and temporarily disable Firefox by @ml-evs in https://github.com/the-grey-group/datalab/pull/703
Add admin dashboard with user management controls by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/674
Added a way to refresh API Key from Account Settings UI by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/700
Recreate user index with new settings if already existing by @ml-evs in https://github.com/the-grey-group/datalab/pull/707
Fix for saving collection blocks and error handling for excessively large blocks by @ml-evs in https://github.com/the-grey-group/datalab/pull/709
Add account_status field (active, unverified or deactivated) to People model by @BenjaminCharmes in https://github.com/the-grey-group/datalab/pull/687

New Contributors

@BenjaminCharmes made their first contribution in https://github.com/the-grey-group/datalab/pull/627
@vrajpatel9988 made their first contribution in https://github.com/the-grey-group/datalab/pull/661

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.3.2...v0.4.0-rc.1

- Python
Published by ml-evs almost 2 years ago

datalab-server - v0.3.2

v0.3.2

This is a build hotfix for 0.3.x, where the incorrect versions of navani and galvani were being installed in docker builds (leading to missing support for ECLab >= 11.50).

What's Changed

Force galvani and navani update in lockfile by @ml-evs in https://github.com/the-grey-group/datalab/pull/602

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.3.1...v0.3.2

- Python
Published by ml-evs about 2 years ago

datalab-server - v0.3.1

v0.3.1

This release makes a few fixes relative to 0.3.0, primarily around file uploads and internal database storage.

It also adds the ability for data blocks to pass errors and warnings to the front-end, which can be useful for helping describe incompatibilities in data, analysis or plotting dynamically.

What's Changed

Pin prettier version in Webapp to same version that is specified in pre-commit by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/589
Downgrade pre-commit prettier by @ml-evs in https://github.com/the-grey-group/datalab/pull/593
CSS cleanup by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/588
Fix issue where plot data was always stored in db by @ml-evs in https://github.com/the-grey-group/datalab/pull/599
Add ability for block errors and warnings to be passed through API to UI by @ml-evs in https://github.com/the-grey-group/datalab/pull/590
Fix issue where previously uploaded file cannot be replaced by @ml-evs in https://github.com/the-grey-group/datalab/pull/594

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.3.0...v0.3.1

- Python
Published by ml-evs about 2 years ago

datalab-server - v0.3.0

v0.3.0

This is the long overdue v0.3.0 release of datalab, which coincides with many new deployments popping up. It is strongly recommended to upgrade and continue to keep up-to-date with releases as they come out. There are no intentional breaking changes between this release and the previous release candidates, so please report any issues you come across on the GitHub issue tracker.

Thanks to new contributor @elbee99 who has added support for Raman spectroscopy, plus new contributors with as-of-yet unreleased changes!

Headline features (relative to v0.2.5)

Support for Biologic data files created with the most recent versions of ECLab 11.50+, plus enhanced support for Arbin data files
A new 1D Raman block that can parse both Renishaw WDF and Oxford Instrument's spectra
Ability to group samples and other entries into collections
Support for new authentication methods, such as magic links via email
Significant refactoring and modularization to ease the process of new contributions
Simplified deployment procedure via Docker
Automated snapshot backups

Full changelog

Add concept of user manager permissions by @ml-evs in https://github.com/the-grey-group/datalab/pull/417
Add UI for collections, fix local graphs and improve tables by @ml-evs in https://github.com/the-grey-group/datalab/pull/404
Adjust default echem subsampling by @ml-evs in https://github.com/the-grey-group/datalab/pull/426
Version bumps and linting tweaks by @ml-evs in https://github.com/the-grey-group/datalab/pull/429
Remote filesystem scanning improvements by @ml-evs in https://github.com/the-grey-group/datalab/pull/430
Implemented Raman block by @elbee99 in https://github.com/the-grey-group/datalab/pull/422
Move echem block to its own app submodule by @ml-evs in https://github.com/the-grey-group/datalab/pull/433
Switch from flake8+isort to ruff by @ml-evs in https://github.com/the-grey-group/datalab/pull/434
Update vue/cli to v5 by @ml-evs in https://github.com/the-grey-group/datalab/pull/432
Tweak to remote file system caching for improved page loads by @ml-evs in https://github.com/the-grey-group/datalab/pull/435
Enable Arbin res file parsing by adding mdbtools/0.7.1 build to server Dockerfile by @ml-evs in https://github.com/the-grey-group/datalab/pull/436
Better sanitize inputs for plot cycle selector by @ml-evs in https://github.com/the-grey-group/datalab/pull/438
Add sample/user/cell counters to deployment about page by @ml-evs in https://github.com/the-grey-group/datalab/pull/383
Fix last modified timezone and make value dynamic by @ml-evs in https://github.com/the-grey-group/datalab/pull/439
Restructure NMR block module and add tests by @ml-evs in https://github.com/the-grey-group/datalab/pull/441
Add basic permissions to files by @ml-evs in https://github.com/the-grey-group/datalab/pull/445
Fix broken README link and update affiliations by @ml-evs in https://github.com/the-grey-group/datalab/pull/448
Manual overhaul of API docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/451
Fix bug where user cannot be created with blank display name by @ml-evs in https://github.com/the-grey-group/datalab/pull/456
Bump navani and try to accomodate other deps by @ml-evs in https://github.com/the-grey-group/datalab/pull/457
Update INSTALL.md by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/458
Add subtitled intro video to README by @ml-evs in https://github.com/the-grey-group/datalab/pull/459
Bump @babel/traverse from 7.22.10 to 7.23.2 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/463
Bump apollo-server-core from 3.12.0 to 3.12.1 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/446
Bump tinymce from 5.10.7 to 5.10.8 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/465
Support .wdf files for 1D Raman by @elbee99 in https://github.com/the-grey-group/datalab/pull/466
Add more details to README by @ml-evs in https://github.com/the-grey-group/datalab/pull/479
Adding limits on file uploads by @ml-evs in https://github.com/the-grey-group/datalab/pull/475
Improve login/logout UI to support multiple authentication mechanisms by @ml-evs in https://github.com/the-grey-group/datalab/pull/384
Remove unecessary scope for GitHub OAuth by @ml-evs in https://github.com/the-grey-group/datalab/pull/483
Tweak to deployed documentation by @ml-evs in https://github.com/the-grey-group/datalab/pull/485
Revamp installation docs with additional configuration/administration/deployment info by @ml-evs in https://github.com/the-grey-group/datalab/pull/490
[pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/the-grey-group/datalab/pull/493
Bump browserify-sign from 4.2.1 to 4.2.2 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/480
Rework e2e tests by @ml-evs in https://github.com/the-grey-group/datalab/pull/504
CI build optimisations by @ml-evs in https://github.com/the-grey-group/datalab/pull/497
Fix file permissions issues by @ml-evs in https://github.com/the-grey-group/datalab/pull/511
Labspec 1D Raman compatibility by @elbee99 in https://github.com/the-grey-group/datalab/pull/477
Make sure cypress cloud runs are recorded by @ml-evs in https://github.com/the-grey-group/datalab/pull/515
Clarify refcode prefix docs and config by @ml-evs in https://github.com/the-grey-group/datalab/pull/516
Add note about GitHub callback URL in docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/517
Bump to cypress 13 and remove flaky tests in CI by @ml-evs in https://github.com/the-grey-group/datalab/pull/519
Additionally e2e test Firefox & Chrome by default by @ml-evs in https://github.com/the-grey-group/datalab/pull/521
Improve GitHub OAuth connection by @ml-evs in https://github.com/the-grey-group/datalab/pull/523
Fix scope order for GitHub OAuth app by @ml-evs in https://github.com/the-grey-group/datalab/pull/525
Generate default SECRET_KEY from platform-specific info by @ml-evs in https://github.com/the-grey-group/datalab/pull/527
Make Flask session lifetime configurable by @ml-evs in https://github.com/the-grey-group/datalab/pull/526
Add ability to register and sign-in via email magic links by @ml-evs in https://github.com/the-grey-group/datalab/pull/484
Check and warn for missing secrets in server startup logs by @ml-evs in https://github.com/the-grey-group/datalab/pull/529
Miscellaneous tidying by @ml-evs in https://github.com/the-grey-group/datalab/pull/532
remove option to add a "Test Block" on the edit page by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/535
Promote invoke to a real dependency rather than dev dependency by @ml-evs in https://github.com/the-grey-group/datalab/pull/541
Fix y_options bug when plotting 1D Raman by @ml-evs in https://github.com/the-grey-group/datalab/pull/542
Native support for automatic backups by @ml-evs in https://github.com/the-grey-group/datalab/pull/467
Add rotating file log handler and simplify streamed log messages by @ml-evs in https://github.com/the-grey-group/datalab/pull/545
Update backup docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/544
Bump follow-redirects from 1.15.2 to 1.15.4 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/533
Bump tinymce from 5.10.8 to 5.10.9 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/508
Update galvani to 0.3.0 by @ml-evs in https://github.com/the-grey-group/datalab/pull/551
Pin openai to 0.28 until we can migrate by @ml-evs in https://github.com/the-grey-group/datalab/pull/555
Bump aiohttp from 3.9.1 to 3.9.2 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/559
Add UI for adding an existing item to an existing collection by @ml-evs in https://github.com/the-grey-group/datalab/pull/553
Bump navani to support ECLab >= 11.50 by @ml-evs in https://github.com/the-grey-group/datalab/pull/563
[pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/the-grey-group/datalab/pull/564
Add spacing above logo by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/575
Tweaks and bugfixes for collection assignment UI, badge styles and navbar by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/566
Add drop shadow to badge hover by @ml-evs in https://github.com/the-grey-group/datalab/pull/579
Upgrade mdbtools per new galvani version by @ml-evs in https://github.com/the-grey-group/datalab/pull/581
Disable ORCID sign-in UI for now by @ml-evs in https://github.com/the-grey-group/datalab/pull/580
Prepare 0.3.0 release by @ml-evs in https://github.com/the-grey-group/datalab/pull/583

New Contributors

@elbee99 made their first contribution in https://github.com/the-grey-group/datalab/pull/422
@pre-commit-ci made their first contribution in https://github.com/the-grey-group/datalab/pull/493

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.2.5...v0.3.0

- Python
Published by ml-evs about 2 years ago

datalab-server - v0.3.0-rc3

What's Changed

Make sure cypress cloud runs are recorded by @ml-evs in https://github.com/the-grey-group/datalab/pull/515
Clarify refcode prefix docs and config by @ml-evs in https://github.com/the-grey-group/datalab/pull/516
Add note about GitHub callback URL in docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/517
Bump to cypress 13 and remove flaky tests in CI by @ml-evs in https://github.com/the-grey-group/datalab/pull/519
Additionally e2e test Firefox & Chrome by default by @ml-evs in https://github.com/the-grey-group/datalab/pull/521
Improve GitHub OAuth connection by @ml-evs in https://github.com/the-grey-group/datalab/pull/523
Fix scope order for GitHub OAuth app by @ml-evs in https://github.com/the-grey-group/datalab/pull/525
Generate default SECRET_KEY from platform-specific info by @ml-evs in https://github.com/the-grey-group/datalab/pull/527
Make Flask session lifetime configurable by @ml-evs in https://github.com/the-grey-group/datalab/pull/526
Add ability to register and sign-in via email magic links by @ml-evs in https://github.com/the-grey-group/datalab/pull/484
Check and warn for missing secrets in server startup logs by @ml-evs in https://github.com/the-grey-group/datalab/pull/529
Miscellaneous tidying by @ml-evs in https://github.com/the-grey-group/datalab/pull/532
remove option to add a "Test Block" on the edit page by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/535
Promote invoke to a real dependency rather than dev dependency by @ml-evs in https://github.com/the-grey-group/datalab/pull/541
Fix y_options bug when plotting 1D Raman by @ml-evs in https://github.com/the-grey-group/datalab/pull/542
Native support for automatic backups by @ml-evs in https://github.com/the-grey-group/datalab/pull/467
Add rotating file log handler and simplify streamed log messages by @ml-evs in https://github.com/the-grey-group/datalab/pull/545
Update backup docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/544
Bump follow-redirects from 1.15.2 to 1.15.4 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/533
Bump tinymce from 5.10.8 to 5.10.9 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/508
Update galvani to 0.3.0 by @ml-evs in https://github.com/the-grey-group/datalab/pull/551
Pin openai to 0.28 until we can migrate by @ml-evs in https://github.com/the-grey-group/datalab/pull/555
Bump aiohttp from 3.9.1 to 3.9.2 in /pydatalab by @dependabot in https://github.com/the-grey-group/datalab/pull/559
Add UI for adding an existing item to an existing collection by @ml-evs in https://github.com/the-grey-group/datalab/pull/553
Bump navani to support ECLab <=11.50 by @ml-evs in https://github.com/the-grey-group/datalab/pull/563

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.3.0-rc2...v0.3.0-rc3

- Python
Published by ml-evs about 2 years ago

datalab-server - v0.3.0-rc2

This is a pre-release of the upcoming v0.3.0.

There are few outstanding issues before we are comfortable releasing, primarily that we have some spurious test failures that occur only in our CI. We estimate these will be resolved by the end of the year (given current leave schedules of certain core developers...) In the meantime please use this pre-release for deployments and let us know if there are any issues.

What's Changed

Add concept of user manager permissions by @ml-evs in https://github.com/the-grey-group/datalab/pull/417
Add UI for collections, fix local graphs and improve tables by @ml-evs in https://github.com/the-grey-group/datalab/pull/404
Adjust default echem subsampling by @ml-evs in https://github.com/the-grey-group/datalab/pull/426
Version bumps and linting tweaks by @ml-evs in https://github.com/the-grey-group/datalab/pull/429
Remote filesystem scanning improvements by @ml-evs in https://github.com/the-grey-group/datalab/pull/430
Implemented Raman block by @elbee99 in https://github.com/the-grey-group/datalab/pull/422
Move echem block to its own app submodule by @ml-evs in https://github.com/the-grey-group/datalab/pull/433
Switch from flake8+isort to ruff by @ml-evs in https://github.com/the-grey-group/datalab/pull/434
Update vue/cli to v5 by @ml-evs in https://github.com/the-grey-group/datalab/pull/432
Tweak to remote file system caching for improved page loads by @ml-evs in https://github.com/the-grey-group/datalab/pull/435
Enable Arbin res file parsing by adding mdbtools/0.7.1 build to server Dockerfile by @ml-evs in https://github.com/the-grey-group/datalab/pull/436
Better sanitize inputs for plot cycle selector by @ml-evs in https://github.com/the-grey-group/datalab/pull/438
Add sample/user/cell counters to deployment about page by @ml-evs in https://github.com/the-grey-group/datalab/pull/383
Fix last modified timezone and make value dynamic by @ml-evs in https://github.com/the-grey-group/datalab/pull/439
Restructure NMR block module and add tests by @ml-evs in https://github.com/the-grey-group/datalab/pull/441
Add basic permissions to files by @ml-evs in https://github.com/the-grey-group/datalab/pull/445
Fix broken README link and update affiliations by @ml-evs in https://github.com/the-grey-group/datalab/pull/448
Manual overhaul of API docs by @ml-evs in https://github.com/the-grey-group/datalab/pull/451
Fix bug where user cannot be created with blank display name by @ml-evs in https://github.com/the-grey-group/datalab/pull/456
Bump navani and try to accomodate other deps by @ml-evs in https://github.com/the-grey-group/datalab/pull/457
Update INSTALL.md by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/458
Add subtitled intro video to README by @ml-evs in https://github.com/the-grey-group/datalab/pull/459
Bump @babel/traverse from 7.22.10 to 7.23.2 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/463
Bump apollo-server-core from 3.12.0 to 3.12.1 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/446
Bump tinymce from 5.10.7 to 5.10.8 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/465
Support .wdf files for 1D Raman by @elbee99 in https://github.com/the-grey-group/datalab/pull/466
Add more details to README by @ml-evs in https://github.com/the-grey-group/datalab/pull/479
Adding limits on file uploads by @ml-evs in https://github.com/the-grey-group/datalab/pull/475
Improve login/logout UI to support multiple authentication mechanisms by @ml-evs in https://github.com/the-grey-group/datalab/pull/384
Remove unecessary scope for GitHub OAuth by @ml-evs in https://github.com/the-grey-group/datalab/pull/483
Tweak to deployed documentation by @ml-evs in https://github.com/the-grey-group/datalab/pull/485
Revamp installation docs with additional configuration/administration/deployment info by @ml-evs in https://github.com/the-grey-group/datalab/pull/490
[pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in https://github.com/the-grey-group/datalab/pull/493
Bump browserify-sign from 4.2.1 to 4.2.2 in /webapp by @dependabot in https://github.com/the-grey-group/datalab/pull/480
Rework e2e tests by @ml-evs in https://github.com/the-grey-group/datalab/pull/504
CI build optimisations by @ml-evs in https://github.com/the-grey-group/datalab/pull/497
Fix file permissions issues by @ml-evs in https://github.com/the-grey-group/datalab/pull/511
Labspec 1D Raman compatibility by @elbee99 in https://github.com/the-grey-group/datalab/pull/477

New Contributors

@elbee99 made their first contribution in https://github.com/the-grey-group/datalab/pull/422
@pre-commit-ci made their first contribution in https://github.com/the-grey-group/datalab/pull/493

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.2.5...v0.3.0-rc2

- Python
Published by ml-evs about 2 years ago

datalab-server - v0.2.5

What's Changed

This release is primarily to trigger Zenodo archival, but also contains some improvements to the chat block and the initial API support for collections of entries.

Add collections type to API by @ml-evs in https://github.com/the-grey-group/datalab/pull/403
make website title setable by environment variable by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/408
NMR block process number bugfix by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/407
Chat improvements by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/414
Add CITATION.cff file for repository by @ml-evs in https://github.com/the-grey-group/datalab/pull/416

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.2.4...v0.2.5

- Python
Published by ml-evs over 2 years ago

datalab-server - v0.2.4

What's Changed

This release introduces a change that should speed up page loads on most datalab pages considerably. The edit page now loads quickly, while blocks with slower-loading large data files finish load in parallel and come in as they are ready.

Load blocks asynchronously by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/401

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.2.3...v0.2.4

- Python
Published by jdbocarsly over 2 years ago

datalab-server - v0.2.3

What's Changed

Fix XRD plot wavelength interaction by @ml-evs in https://github.com/the-grey-group/datalab/pull/389
Block loading fixes by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/390
Add release action to automatically bump version number by @ml-evs in https://github.com/the-grey-group/datalab/pull/392
Fix/slim down chatblock context by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/394

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.2.2...v0.2.3

- Python
Published by ml-evs almost 3 years ago

datalab-server - v0.2.2

What's Changed

Fix: Add @click.ctrl for multi-file select in remote sync by @ml-evs in https://github.com/the-grey-group/datalab/pull/387
Fix: syncing of remote files that have spaces in top-level server folder name by @ml-evs in https://github.com/the-grey-group/datalab/commit/730e76f2f09308efbbcd1210f5a721ffae88db22

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.2.1...v0.2.2

- Python
Published by ml-evs almost 3 years ago

datalab-server - v0.2.1

What's Changed

This patch release simply fixes a regression for filtering out cycles in the electrochemistry block.

Fix off-by-one error in echem plot colouring that was breaking filtering by @ml-evs in https://github.com/the-grey-group/datalab/pull/379

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.2.0...v0.2.1

- Python
Published by ml-evs almost 3 years ago

datalab-server - v0.2.0

What's Changed

Update installation/contributing instructions by @ml-evs in https://github.com/the-grey-group/datalab/pull/29
Bump codecov/codecov-action from 1.5.2 to 2.0.2 by @dependabot in https://github.com/the-grey-group/datalab/pull/30
Added a block for echem data visualisation and analysis by @thetenthbox in https://github.com/the-grey-group/datalab/pull/17
Bug fixes, enable linting in CI and add prettier for formatting by @ml-evs in https://github.com/the-grey-group/datalab/pull/34
Make API URL configurable from the webapp, and several bug fixes by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/37
Adding schemas and validation for existing data types by @ml-evs in https://github.com/the-grey-group/datalab/pull/26
Add testing to webapp by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/39
Update README.md with new webapp environment and testing instructions by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/43
New "starting_materials" item type and basic synthesis block by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/47
Fixes arising from deployment by @ml-evs in https://github.com/the-grey-group/datalab/pull/49
Improve logging, and other minor refactoring by @ml-evs in https://github.com/the-grey-group/datalab/pull/62
add text index creation script by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/58
Use vercel's serve instead http-server by @ml-evs in https://github.com/the-grey-group/datalab/pull/67
Front end improvements and bug fixes by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/66
Use caches and staged builds in docker images and use buildkit in the CI by @ml-evs in https://github.com/the-grey-group/datalab/pull/69
Add ability to cache directory structure of remote fs with ssh by @ml-evs in https://github.com/the-grey-group/datalab/pull/64
Jdb/pre commit fixes by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/103
Bundled dependabot updates by @ml-evs in https://github.com/the-grey-group/datalab/pull/105
Only pin major versions for GH actions by @ml-evs in https://github.com/the-grey-group/datalab/pull/108
Fix issues with updating bokeh to 2.4 by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/110
Pass auth headers through uppy by @ml-evs in https://github.com/the-grey-group/datalab/pull/118
XRD improvements and remote filesystem fixes by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/116
Bump actions/setup-python from 3 to 4 by @dependabot in https://github.com/the-grey-group/datalab/pull/117
Updates from BAG time by @ml-evs in https://github.com/the-grey-group/datalab/pull/134
Dependabot and CI config tweaks by @ml-evs in https://github.com/the-grey-group/datalab/pull/162
Fix echem crashes when requesting an impossible derivatives (too few points, or too flat) by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/161
Automerge dependabot PRs into auxiliary branch by @ml-evs in https://github.com/the-grey-group/datalab/pull/176
Update index script to dynamically find full-text search fields by @ml-evs in https://github.com/the-grey-group/datalab/pull/154
XRD block improvements by @ml-evs in https://github.com/the-grey-group/datalab/pull/149
Remote file path escaping, parallel scraping of remotes and related tweaks by @ml-evs in https://github.com/the-grey-group/datalab/pull/157
Dependabot updates by @ml-evs in https://github.com/the-grey-group/datalab/pull/178
NMR block by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/160
Speed-up Docker CI builds (~x2) by @ml-evs in https://github.com/the-grey-group/datalab/pull/183
Add mkdocs config and docs stubs for pydatalab by @ml-evs in https://github.com/the-grey-group/datalab/pull/181
Test locked dependencies in CI/deployment by @ml-evs in https://github.com/the-grey-group/datalab/pull/180
Fix potential security vulnerability in files route by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/199
Add concept of users, user management and OAuth2 authorization flow for ORCID (sandbox) & GitHub by @ml-evs in https://github.com/the-grey-group/datalab/pull/119
make xs grey by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/215
Graph UI view, model refactors and associated changes by @ml-evs in https://github.com/the-grey-group/datalab/pull/218
Tidying up model code by @ml-evs in https://github.com/the-grey-group/datalab/pull/221
Add warning when leaving page if unsaved changes are present by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/223
Edit page UI tweaks by @ml-evs in https://github.com/the-grey-group/datalab/pull/227
Add constrained string model for item IDs by @ml-evs in https://github.com/the-grey-group/datalab/pull/239
Create LICENSE by @ml-evs in https://github.com/the-grey-group/datalab/pull/253
Rework relationships and synthesis constituents and insure synchronisation by @ml-evs in https://github.com/the-grey-group/datalab/pull/225
Sample creation updates and e2e test overhaul by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/224
Update Python dependencies and navani pin by @ml-evs in https://github.com/the-grey-group/datalab/pull/244
Add ability to provide a logo and homepage by @ml-evs in https://github.com/the-grey-group/datalab/pull/248
Return creator from create_sample route and prepend it to table in UI by @ml-evs in https://github.com/the-grey-group/datalab/pull/252
Address CI failure for post setup node by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/261
Gravatar integration in UI by @ml-evs in https://github.com/the-grey-group/datalab/pull/229
Add generic error handlers and specific user registration error template by @ml-evs in https://github.com/the-grey-group/datalab/pull/263
Disable dependabot for now by @ml-evs in https://github.com/the-grey-group/datalab/pull/273
Nest API URL rules and code by version by @ml-evs in https://github.com/the-grey-group/datalab/pull/264
Add /infoendpoint populated by config and request metadata by @ml-evs in https://github.com/the-grey-group/datalab/pull/272
Batch sample creation feature by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/258
Set global default font to Figtree by @ml-evs in https://github.com/the-grey-group/datalab/pull/274
Overhaul README, docs and about page by @ml-evs in https://github.com/the-grey-group/datalab/pull/278
Tweaks to about page and README formatting by @ml-evs in https://github.com/the-grey-group/datalab/pull/281
Replace some dev/admin scripts with invoke tasks and autogenerate schemas by @ml-evs in https://github.com/the-grey-group/datalab/pull/222
Display and customise units in the UI by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/285
Add data model for cells by @ml-evs in https://github.com/the-grey-group/datalab/pull/187
Deploy docs on RTD and add README badges by @ml-evs in https://github.com/the-grey-group/datalab/pull/286
Use logos in README badges by @ml-evs in https://github.com/the-grey-group/datalab/pull/290
GUI for the new cell type by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/288
UI tweaks and refactors by @ml-evs in https://github.com/the-grey-group/datalab/pull/291
Minor bugfixes arising from deployment by @ml-evs in https://github.com/the-grey-group/datalab/pull/295
Fix sizing of EditPage "save" icon by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/301
Add compression to heavy routes by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/302
Intercept flask-dance redirects and point back to HTTP referer by @ml-evs in https://github.com/the-grey-group/datalab/pull/297
Add cycle vs capacity plots to echem block by @ml-evs in https://github.com/the-grey-group/datalab/pull/293
Fix linting by @ml-evs in https://github.com/the-grey-group/datalab/pull/306
Fix empty string in float value bug by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/309
Fix empty string in float value bug, part 2 by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/312
Enable Bokeh save tool by @ml-evs in https://github.com/the-grey-group/datalab/pull/316
Add concept of refcodes by @ml-evs in https://github.com/the-grey-group/datalab/pull/311
Graph view updates: filter out deleted nodes, add cells and item-centred graphs by @ml-evs in https://github.com/the-grey-group/datalab/pull/321
Add support for videos (image block becomes a media block) by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/327
Add sortable, paginated data table under /next by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/317
Minor fixes and relinting by @ml-evs in https://github.com/the-grey-group/datalab/pull/328
Add on-the-fly TIFF encoding to image block by @ml-evs in https://github.com/the-grey-group/datalab/pull/326
Minor web app fixes by @ml-evs in https://github.com/the-grey-group/datalab/pull/334
Mark remote files as not live if not written to within some period by @ml-evs in https://github.com/the-grey-group/datalab/pull/320
Fixes for arbin and optimisations for large echem files by @ml-evs in https://github.com/the-grey-group/datalab/pull/340
File list improvements (dates, more info) and associated deps updates by @ml-evs in https://github.com/the-grey-group/datalab/pull/347
Add LLM chat block for conversing with individual samples/devices by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/344
Remove constraints on 'other' cell format requiring a description by @ml-evs in https://github.com/the-grey-group/datalab/pull/350
rename media block -> media by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/353
Add sample modal scroll by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/352
chatblock: swap behavior of shift and shift-enter by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/354
Allow inline references for samples, and other tweaks by @ml-evs in https://github.com/the-grey-group/datalab/pull/346
fix cycle block bug that prevents use of live echem files by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/369
Add simple Ivium EIS block by @ml-evs in https://github.com/the-grey-group/datalab/pull/365
Further chatblock improvements by @jdbocarsly in https://github.com/the-grey-group/datalab/pull/355
Assorted echem tweaks and fixes by @ml-evs in https://github.com/the-grey-group/datalab/pull/370
Add mass spec. block by @ml-evs in https://github.com/the-grey-group/datalab/pull/298
Reworking XRD functionality into standalone submodule by @ml-evs in https://github.com/the-grey-group/datalab/pull/338
Bump version number by @ml-evs in https://github.com/the-grey-group/datalab/pull/380

Full Changelog: https://github.com/the-grey-group/datalab/compare/v0.1.0...v0.2.0

- Python
Published by ml-evs almost 3 years ago

datalab-server - v0.1.0

This is the first release of the datalabvue package, with all of the initial proof-of-concept functionality (and some minor testing) in place.

- Python
Published by ml-evs over 4 years ago

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