bayes-prereg

https://github.com/aaronpeikert/bayes-prereg

Repository

README.Rmd

---
output: github_document
bibliography: references.bib
---



```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)
```

# Why does preregistration increase the persuasiveness of evidence? A Bayesian rationalization.

## [🗎 Manuscript draft 🗎](https://aaronpeikert.github.io/bayes-prereg/manuscript.pdf) / [Talk slides](https://aaronpeikert.github.io/bayes-prereg/presentation.html)


```{r abstract, echo=FALSE, results='asis'}
cat(readLines('abstract.md'))
```

## How to reproduce?

### GitHub Actions

Reproduction is done automatically on GitHub: [![Render and deploy PDF](https://github.com/aaronpeikert/bayes-prereg/actions/workflows/render-n-deploy-pdf.yml/badge.svg)](https://github.com/aaronpeikert/bayes-prereg/actions/workflows/render-n-deploy-pdf.yml), so forking the repo and pushing changes should be sufficient for you to reproduce.

### Using Docker

#### Prebuild Image

This workflow requires Docker, Git, and Make installed:

1. Get docker image, and give it a local tag:

```
docker pull ghcr.io/aaronpeikert/bayes-prereg:main
docker tag ghcr.io/aaronpeikert/bayes-prereg:main bayesprereg:latest
```

2. Reproduce:

```
git clone https://github.com/aaronpeikert/bayes-prereg.git
cd bayes-prereg
make DOCKER=TRUE
```

#### Self build Image

1. Build the image locally:

```
make docker
```

2. Reproduce:

```
make DOCKER=TRUE
```

#### Without Make/Git

Since Make and Git are installed in the image, the docker container is technically all you need.
However, retrieving the end result requires you to [bind a volume to the container (modify first comand).](https://docs.docker.com/storage/volumes/)

```
docker run ghcr.io/aaronpeikert/bayes-prereg:main bash
git clone https://github.com/aaronpeikert/bayes-prereg.git
cd bayes-prereg
make
```

An alternative with graphical user interface is:

1. Get docker image:

```
docker run ghcr.io/aaronpeikert/bayes-prereg:main
```

2. Use the url and password that is shown to you in the terminal to open RStudio in your web browser.
3. Create a new project, click on "version control", click on "git", paste url: `https://github.com/aaronpeikert/bayes-prereg.git`
4. Reproduce by running `make` in the RStudio terminal (not console!).

### Locally

#### With Git and Make

Make sure you have all installed software you need.

```
git clone https://github.com/aaronpeikert/bayes-prereg.git
cd bayes-prereg
make
```

#### Per pedes

1. Open RStudio
2. Create a new project, click on "version control", click on "git", paste url: `https://github.com/aaronpeikert/bayes-prereg.git`
3. Open `manuscript.Rmd`.
4. Install all the packages listed under `packages` in the yaml metadata.
5. Open `R/simulation.R` and run it.
6. Open `manuscript.Rmd` and click on knit.

Citation (CITATION.cff)

# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!

cff-version: 1.2.0
title: >-
  Why does preregistration increase the persuasiveness of
  evidence? A Bayesian rationalization.
message: >-
  If you use this dataset, please cite it using the metadata
  from this file.
type: article
authors:
  - family-names: Peikert
    given-names: Aaron
    orcid: 'https://orcid.org/0000-0001-7813-818X'
  - family-names: Brandmaier
    given-names: Andreas M.
    orcid: 'https://orcid.org/0000-0001-8765-6982'
repository-code: 'https://github.com/aaronpeikert/bayes-prereg'
url: 'https://aaronpeikert.github.io/bayes-prereg/manuscript.pdf'
license: CC0-1.0
commit: 16b2bbd

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