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fundustracker

https://github.com/thomasb6/fundustracker

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (5.1%) to scientific vocabulary
Last synced: 10 months ago · JSON representation ·

Repository

Basic Info
  • Host: GitHub
  • Owner: thomasb6
  • License: gpl-2.0
  • Language: Python
  • Default Branch: main
  • Size: 310 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created over 1 year ago · Last pushed 10 months ago
Metadata Files
Readme License Citation

README.md

FundusTracker

FundusTracker is a web-based tool for semi-automatic and manual annotation of retinal lesions

License

FundusTracker is released under the GNU General Public License v2.0.

Authors

FundusTracker was developed by Thomas Foulonneau,
as part of a doctoral research project at Université Paris Cité.

Scientific supervision and clinical guidance were provided by Dr. Aliénor Vienne-Jumeau (AP-HP).

Citation Required

If you use this software, please cite:

Foulonneau T., Vienne-Jumeau A. FundusTracker, 2025. https://github.com/thomasb6/FundusTracker/

Commercial Use

Any commercial or clinical use of this software must comply with the terms of the GPL v2.0 license.
For proprietary licensing or integration, please contact the author.

Contact

  • Thomas Foulonneau — thomas-foulonneau@hotmail.fr

Owner

  • Name: Th. F
  • Login: thomasb6
  • Kind: user

4th year medical students - Angers Master in Bioinformatics and Modeling- Sorbonne Université

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
title: "FundusTracker"
version: "1.0"
date-released: "2025-07-17"
url: "https://github.com/thomasb6/FundusTracker"
repository: "https://github.com/thomasb6/FundusTracker"
license: "GPL-2.0"
type: software

authors:
  - family-names: Foulonneau
    given-names: Thomas
    affiliation: Université Paris Cité
    orcid: https://orcid.org/0009-0001-9824-9394 
  - family-names: Vienne-Jumeau
    given-names: Aliénor
    affiliation: AP-HP, Hôpital Cochin

keywords:
  - retina
  - annotation
  - ophthalmology
  - fundus images
  - image tracking
  - open source

abstract: >
  FundusTracker is a web-based tool for manual and semi-automatic annotation of retinal lesions,
  developed as part of a medical thesis at Université Paris Cité. It supports visualization,
  lesion marking, and longitudinal alignment of widefield fundus images.

GitHub Events

Total
  • Delete event: 1
  • Push event: 16
Last Year
  • Delete event: 1
  • Push event: 16

Dependencies

Dockerfile docker
  • python 3.9.13 build
requirements.txt pypi
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  • PyYAML ==6.0.2
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  • XlsxWriter ==3.2.2
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  • tzdata ==2025.1
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  • weasyprint ==65.1
  • webencodings ==0.5.1
  • zipp ==3.21.0
  • zopfli ==0.2.3.post1