reportho - nf-core/reportho v1.0.1

This is a small patch to address two issues.

Fixed

• Structural alignment now uses correct channels.
• Reduced number of files in the output directory when output_intermediates is not enabled.

What's Changed

• Patch release 1.0.1 by @itrujnara in https://github.com/nf-core/reportho/pull/57

Full Changelog: https://github.com/nf-core/reportho/compare/1.0.0...1.0.1

- Nextflow
Published by itrujnara over 1 year ago

reportho - nf-core/reportho v1.0.0 – Magnificent Mainsail

What's Changed

• Created basic homepage, added tube map to docs by @itrujnara in https://github.com/nf-core/reportho/pull/4
• Modularized database information, updated iqtree and fastme modules by @itrujnara in https://github.com/nf-core/reportho/pull/5
• Finished report integration by @itrujnara in https://github.com/nf-core/reportho/pull/6
• Added stats generation, added stats to the report by @itrujnara in https://github.com/nf-core/reportho/pull/7
• Nextflow code cleanup/formatting by @itrujnara in https://github.com/nf-core/reportho/pull/8
• New tube map by @itrujnara in https://github.com/nf-core/reportho/pull/9
• Updated modules.config by @itrujnara in https://github.com/nf-core/reportho/pull/10
• Multiple tweaks by @itrujnara in https://github.com/nf-core/reportho/pull/13
• Add stub and update test by @JoseEspinosa in https://github.com/nf-core/reportho/pull/16
• Bug fixes by @itrujnara in https://github.com/nf-core/reportho/pull/18
• Preparation for release 1.0.0 by @itrujnara in https://github.com/nf-core/reportho/pull/15
• Template merge v2.14.0 by @JoseEspinosa in https://github.com/nf-core/reportho/pull/21
• Important! Template update for nf-core/tools v2.14.1 by @nf-core-bot in https://github.com/nf-core/reportho/pull/24
• Added MultiQC by @itrujnara in https://github.com/nf-core/reportho/pull/25
• Add validation for fasta input and tests by @JoseEspinosa in https://github.com/nf-core/reportho/pull/20
• Added better request error handling by @itrujnara in https://github.com/nf-core/reportho/pull/26
• Added light mode plots by @itrujnara in https://github.com/nf-core/reportho/pull/27
• Added offline run flag and profile by @itrujnara in https://github.com/nf-core/reportho/pull/29
• Update modules by @JoseEspinosa in https://github.com/nf-core/reportho/pull/30
• Improved path handling in get_orthologs by @itrujnara in https://github.com/nf-core/reportho/pull/31
• Fixed Venn diagram bug by @itrujnara in https://github.com/nf-core/reportho/pull/32
• Fixed local OMA bug by @itrujnara in https://github.com/nf-core/reportho/pull/33
• Bug fixes by @itrujnara in https://github.com/nf-core/reportho/pull/34
• Revert to nf-validation, as nf-schema was not really used by @JoseEspinosa in https://github.com/nf-core/reportho/pull/42
• Minor changes by @luisas in https://github.com/nf-core/reportho/pull/41
• Replace grep with ripgrep for expensive searches by @itrujnara in https://github.com/nf-core/reportho/pull/43
• Multiple fixes by @itrujnara in https://github.com/nf-core/reportho/pull/45
• Get rid of custom images by @JoseEspinosa in https://github.com/nf-core/reportho/pull/44
• Update how image is set for report by @JoseEspinosa in https://github.com/nf-core/reportho/pull/47
• Bug fixes by @itrujnara in https://github.com/nf-core/reportho/pull/46
• Some updates (see below) by @JoseEspinosa in https://github.com/nf-core/reportho/pull/49
• Version bump and changelog by @itrujnara in https://github.com/nf-core/reportho/pull/50
• Release review comments by @itrujnara in https://github.com/nf-core/reportho/pull/52
• Chenged command in CONTRIBUTING.md by @itrujnara in https://github.com/nf-core/reportho/pull/53
• Tube map tweak by @itrujnara in https://github.com/nf-core/reportho/pull/54
• Fixed plots in the report, changed release date by @itrujnara in https://github.com/nf-core/reportho/pull/55
• Release 1.0.0 by @itrujnara in https://github.com/nf-core/reportho/pull/51

New Contributors

• @JoseEspinosa made their first contribution in https://github.com/nf-core/reportho/pull/16
• @nf-core-bot made their first contribution in https://github.com/nf-core/reportho/pull/24
• @luisas made their first contribution in https://github.com/nf-core/reportho/pull/41

Full Changelog: https://github.com/nf-core/reportho/commits/1.0.0

- Nextflow
Published by itrujnara over 1 year ago