odontocete-lifehistory

R code and data for phylogenetic analysis of odontocete life history traits.

https://github.com/ferguste/odontocete-lifehistory

Science Score: 44.0%

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Repository

R code and data for phylogenetic analysis of odontocete life history traits.

Basic Info
  • Host: GitHub
  • Owner: ferguste
  • License: mit
  • Language: R
  • Default Branch: main
  • Size: 52.7 KB
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Created 9 months ago · Last pushed 7 months ago
Metadata Files
Readme Citation

README.md

odontocete-lifehistory

R code and data for phylogenetic analysis of odontocete life history traits. This repository contains R code and data for analyzing life-history traits of odontocetes using phylogenetic methods, supporting a forthcoming journal publication.

Raw data odontocete.csv

subo = suborder f = family code fam = family sp = scientific species name name = common name group = Archetype clus = Results from Ferguson, S.H., Higdon, J.W., Schmidt, C., Pomerleau, C. and Matthews, C.J., 2023. Investigating the relationship between body shape and life history traits in toothed whales: Can body shape predict fast-slow life histories?. Evolutionary Biology, 50(3), pp.300-317. len = adult body length (m) loglen = log(len) weight = adult body weight (g) logwt = log(wt) wtpred = predicted weight controlled for body length wtresid = residual weight from log(wt) ~ log(len) gest = gestation length (mo) loggest = log(gest) gestpred = predicted gestation length from regression gestresid = residual gestation from log(gest) ~ log(len) same fro inter = interbirth interval long = longevity (y) newolen = neonate length (m) at birth asm = age at sexual maturation (y) lbathy = log(bathymetry) Ice15sMed = Median number of months in a year with sea ice ablat = absolute value of latitude

Owner

  • Login: ferguste
  • Kind: user

Citation (CITATION)

If you use this code, please cite the associated publication (TBA) and acknowledge Dr. Steven Ferguson, DFO, Arctic Region.

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