b2aiprep - 2.6.0

🚀 Enhancement

• Data validation #187 (@Evan8456)

Authors: 1

• Evan Ng (@Evan8456)

- Python
Published by satra 7 months ago

b2aiprep - 2.5.0

🚀 Enhancement

• 181 add at least one test for each function #183 (@ibevers @Evan8456)

🐛 Bug Fix

• Added Anxiety #173 (@Evan8456)

Authors: 2

• @ibevers
• Evan Ng (@Evan8456)

- Python
Published by satra 7 months ago

b2aiprep - 2.4.0

🚀 Enhancement

• Fix/issue#174 #179 (@Evan8456)

Authors: 1

• Evan Ng (@Evan8456)

- Python
Published by satra 9 months ago

b2aiprep - 2.3.0

🚀 Enhancement

• 142 set weights only to false #168 (@ibevers)

Authors: 1

• @ibevers

- Python
Published by satra 10 months ago

b2aiprep - 2.2.0

🚀 Enhancement

• Fix import problem #132 (@ibevers)

Authors: 1

• @ibevers

- Python
Published by satra 11 months ago

b2aiprep - 2.1.0

🚀 Enhancement

• patch for release v2.0.0 #167 (@alistairewj)

Authors: 1

• Alistair Johnson (@alistairewj)

- Python
Published by satra 11 months ago

b2aiprep - 2.0.0

💥 Breaking Change

• Rel/v2 #152 (@Evan8456 @alistairewj @ibevers)

🐛 Bug Fix

• publish bids #165 (@alistairewj)
• Fix tests #164 (@ibevers)
• 161 remove recording metadata suffix #162 (@ibevers)
• 159 update dataset descriptionjson #160 (@ibevers)
• 157 update changesmd #158 (@ibevers)
• Fix audio removal #156 (@alistairewj)
• Fix phenotype df #155 (@alistairewj)
• Misc fixes to the derived dataset #154 (@alistairewj)
• updated participants.json #153 (@Evan8456)
• Add weights_only=False in torch.load #151 (@ibevers)
• remove columns which were not in v1 #150 (@alistairewj)

Authors: 3

• @ibevers
• Alistair Johnson (@alistairewj)
• Evan Ng (@Evan8456)

- Python
Published by satra 11 months ago

b2aiprep - 1.3.0

🚀 Enhancement

• 127 update setup.py and readme to ensure arm python on mac #128 (@ibevers)

Authors: 1

• @ibevers

- Python
Published by satra 12 months ago

b2aiprep - 1.2.0

🚀 Enhancement

• 115 fix comments in commandspy #129 (@ibevers)

🐛 Bug Fix

• Created Script to generate redcap csv based on peds data and created reproschema-audio-to-folder command to cli #116 (@Evan8456)

Authors: 2

• @ibevers
• Evan Ng (@Evan8456)

- Python
Published by satra about 1 year ago

b2aiprep - 1.1.0

🚀 Enhancement

• Spectrogram improvements #99 (@alistairewj)

🐛 Bug Fix

• 100 refactor and tests for phenotype json code #101 (@ibevers)
• Update ci.yml with workflow_dispatch #106 (@ibevers)

Authors: 2

• @ibevers
• Alistair Johnson (@alistairewj)

- Python
Published by satra about 1 year ago

b2aiprep - 1.0.0

💥 Breaking Change

• add another orcid #96 (@alistairewj)

🚀 Enhancement

• 97 add phenotype json code #98 (@satra satra@node1703.inband @ibevers @alistairewj)
• 89 add data elements to descriptions #90 (@ibevers satra@node1703.inband @satra)

🐛 Bug Fix

• refactor derivative generation #94 (@satra satra@node1703.inband)
• enh: refactor options for prepare_bids #93 (@satra)
• Corpus 3 release fixes #86 (@ibevers @alistairewj @satra)
• [WIP] Fixes for b2aiprep for data release #91 (@satra)
• Merge branch 'alistair/corpus_3' into corpus-3-release-fixes #80 (@ibevers)

⚠️ Pushed to main

• fix column name in data removal and add remaining free-text columns (@alistairewj)
• add citation file (@alistairewj)
• update creation of the derived dataset intended for publication (@alistairewj)
• add description of features extracted from audio (@alistairewj)

Authors: 4

• @ibevers
• Alistair Johnson (@alistairewj)
• satra (satra@node1703.inband)
• Satrajit Ghosh (@satra)

- Python
Published by satra over 1 year ago

b2aiprep - 0.20.0

🚀 Enhancement

• Update the BIDS-like saving to align with template directory #77 (@ibevers)

🐛 Bug Fix

• Merge in bids-like-updates #78 (@ibevers)
• Add BIDS-like data template directory structure #76 (@ibevers)

Authors: 1

• @ibevers

- Python
Published by satra over 1 year ago

b2aiprep - 0.19.0

🚀 Enhancement

• Replace process.py with senselab functions #74 (@ibevers)

🐛 Bug Fix

• Update README.md to specify bids_dir parameter in Streamlit example #72 (@DebuggerDan)

Authors: 2

• @ibevers
• dan (@DebuggerDan)

- Python
Published by satra over 1 year ago

b2aiprep - 0.18.1

What's Changed

• changed the findaudiofeatures function in the dataset file by @ahmedshahabaz in https://github.com/sensein/b2aiprep/pull/70
• Fix duplicate pd df indexes bug by @ibevers in https://github.com/sensein/b2aiprep/pull/71

New Contributors

• @ahmedshahabaz made their first contribution in https://github.com/sensein/b2aiprep/pull/70

Full Changelog: https://github.com/sensein/b2aiprep/compare/0.18.0...0.18.1

- Python
Published by alistairewj over 1 year ago

b2aiprep - 0.18.0

🚀 Enhancement

• Remove TTS and convert voice feature #63 (@alistairewj)

🐛 Bug Fix

• Audio tutorial #64 (@alistairewj)

Authors: 1

• Alistair Johnson (@alistairewj)

- Python
Published by satra over 1 year ago

b2aiprep - 0.17.0

What's Changed

• Update summerschooldata.py header comment with new CLI by @ibevers in https://github.com/sensein/b2aiprep/pull/58
• Adding small demo of using a trivial embedding model to 'search' thro… by @satra in https://github.com/sensein/b2aiprep/pull/50
• Alistair/resource fixes by @alistairewj in https://github.com/sensein/b2aiprep/pull/59
• Dashboard by @alistairewj in https://github.com/sensein/b2aiprep/pull/55
• Ensure streamlit only runs on localhost by @ibevers in https://github.com/sensein/b2aiprep/pull/61

Full Changelog: https://github.com/sensein/b2aiprep/compare/0.16.0...0.17.0

- Python
Published by alistairewj over 1 year ago

b2aiprep - 0.16.0

🚀 Enhancement

• Add CLI command for summer school data preparation #57 (@ibevers)

Authors: 1

• @ibevers

- Python
Published by satra over 1 year ago

b2aiprep - 0.15.0

🚀 Enhancement

• Add Summer School Data Organization Code #56 (@ibevers @alistairewj)

🐛 Bug Fix

• tie together the various constants used for parsing the redcap CSV #54 (@alistairewj)
• BIDS-like format #52 (@alistairewj)

Authors: 2

• @ibevers
• Alistair Johnson (@alistairewj)

- Python
Published by satra over 1 year ago

b2aiprep - 0.14.2

What's Changed

• add init file for detection of resources folder by @alistairewj in https://github.com/sensein/b2aiprep/pull/47
• updated demographics.py to have more repeated instruments by @Evan8456 in https://github.com/sensein/b2aiprep/pull/48

New Contributors

• @Evan8456 made their first contribution in https://github.com/sensein/b2aiprep/pull/48

Full Changelog: https://github.com/sensein/b2aiprep/compare/0.14.1...0.14.2

- Python
Published by alistairewj almost 2 years ago

b2aiprep - 0.14.1

What's Changed

• Add openhouse notebooks by @satra in https://github.com/sensein/b2aiprep/pull/42
• Fixed a typo in README file. by @stevenbedrick in https://github.com/sensein/b2aiprep/pull/44
• Fixed another typo by @stevenbedrick in https://github.com/sensein/b2aiprep/pull/46
• Update demographics.py by @satra in https://github.com/sensein/b2aiprep/pull/45
• update search to include dataframe reordering by @satra in https://github.com/sensein/b2aiprep/pull/43

New Contributors

• @stevenbedrick made their first contribution in https://github.com/sensein/b2aiprep/pull/44

Full Changelog: https://github.com/sensein/b2aiprep/compare/0.14.0...0.14.1

- Python
Published by alistairewj almost 2 years ago

b2aiprep - 0.14.0

🚀 Enhancement

• add json files to setup #41 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.13.0

🚀 Enhancement

• Add functions which make it easier to load/manage the datasets #40 (@alistairewj)

Authors: 1

• Alistair Johnson (@alistairewj)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.12.1

🐛 Bug Fix

• Misc fixes #39 (@alistairewj)

Authors: 1

• Alistair Johnson (@alistairewj)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.12.0

🚀 Enhancement

• Update README.md #38 (@Rahul-Brito)

🐛 Bug Fix

• Added demographics.py #37 (@Rahul-Brito)
• merging in main #36 (@Rahul-Brito @satra sensein-social@mit.edu)

Authors: 3

• B2AIprep Bot (sensein-social@mit.edu)
• Rahul Brito (@Rahul-Brito)
• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.11.0

🚀 Enhancement

• ref: plotting to improve speed #35 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.10.0

🚀 Enhancement

• Added better exception handling #34 (@satra)

🐛 Bug Fix

• Update README.md for batchcsg #33 (@Rahul-Brito)
• fix so does batchconvert not ignore first line of csv #32 (@Rahul-Brito)
• add performance code #30 (@satra sensein-social@mit.edu @Rahul-Brito)
• pulling main into my branch #27 (@satra sensein-social@mit.edu @Rahul-Brito)
• pullling in all the new changes #23 (mbsilva@openmind7.mit.edu @fabiocat93 @satra sensein-social@mit.edu @Rahul-Brito)

Authors: 6

• @fabiocat93
• B2AIprep Bot (sensein-social@mit.edu)
• Miles B Silva (mbsilva@node059.ib.cluster)
• Miles B Silva (mbsilva@openmind7.mit.edu)
• Rahul Brito (@Rahul-Brito)
• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.9.0

🚀 Enhancement

• enh: add optional speech to text conversion to features #29 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.8.1

🐛 Bug Fix

• fix: adjust specgram generation #28 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.8.0

🚀 Enhancement

• fix: restore matplotlib in notebooks and more efficient pydra execution #26 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.7.1

🐛 Bug Fix

• enh: produce double paneled spectrogram #24 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.7.0

🚀 Enhancement

• doc: fix readme numbering #22 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.6.0

🚀 Enhancement

• Add scripts for speech-to-text using whisper and stt+forced alignment with whisperX #13 (mbsilva@openmind7.mit.edu @satra @900miles)

🐛 Bug Fix

• remove whisper and update whisperx #21 (@Rahul-Brito @fabiocat93 @satra sensein-social@mit.edu)

⚠️ Pushed to main

• Update ci.yml (@satra)

Authors: 7

• @900miles
• @fabiocat93
• B2AIprep Bot (sensein-social@mit.edu)
• Miles B Silva (mbsilva@node059.ib.cluster)
• Miles B Silva (mbsilva@openmind7.mit.edu)
• Rahul Brito (@Rahul-Brito)
• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.5.0

🚀 Enhancement

• add speech to text and voice conversion #18 (@fabiocat93 @satra)

Authors: 2

• @fabiocat93
• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.4.0

🚀 Enhancement

• added fig generation code #17 (@Rahul-Brito)

🐛 Bug Fix

• merging main with this branch #16 (@satra @Rahul-Brito)
• adding opensmile #14 (@Rahul-Brito)

Authors: 2

• Rahul Brito (@Rahul-Brito)
• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.3.0

🚀 Enhancement

• add batch processing using pydra #12 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.2.0

🚀 Enhancement

• fix voice verification code #11 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.1.2

🐛 Bug Fix

• add device support #9 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.1.1

🐛 Bug Fix

• doc: update readme #7 (@satra)

Authors: 1

• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago

b2aiprep - 0.1.0

🚀 Enhancement

• add doc parameters #6 (@satra)
• Generate feature file (and other fixes) #5 (@satra)

🐛 Bug Fix

• refactor into a package #2 (@Rahul-Brito @satra)
• initial draft of scalable script for b2ai #1 (@Rahul-Brito)

⚠️ Pushed to main

• update auto to fix bug (@satra)
• first commit of initial voiceprep script with audio (@Rahul-Brito)

Authors: 2

• Rahul Brito (@Rahul-Brito)
• Satrajit Ghosh (@satra)

- Python
Published by satra almost 2 years ago