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kwanlibr

R library for commonly used functions in the Kwan Lab.

https://github.com/thekwanlab/kwanlibr

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (6.5%) to scientific vocabulary
Last synced: 9 months ago · JSON representation ·

Repository

R library for commonly used functions in the Kwan Lab.

Basic Info
  • Host: GitHub
  • Owner: thekwanlab
  • License: gpl-3.0
  • Language: R
  • Default Branch: main
  • Size: 151 KB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 4
  • Releases: 1
Created about 3 years ago · Last pushed 10 months ago
Metadata Files
Readme License Citation

README.md

kwanlibr

R library for commonly used functions in the Kwan Lab.

Development

See more details in the Kwan Lab Bioinformatics google drive

  1. Obtain the package repository with git and start a new branch
  2. Make changes
  3. Write documentation under the roxygen2 standard
  4. Test loading the package with devtools::load_all()
  5. Run the test suite corresponding with your changes
    1. This will require obtaining a informal_test/test_suite_config.yaml file containing paths to personal files used for testing
  6. Update package metadata (such as imports, description, version number) with usethis
  7. Commit, push to non-main branch, and make pull request

Owner

  • Name: Kwan Lab
  • Login: thekwanlab
  • Kind: organization
  • Location: University of Michigan

The Kwan laboratory at the University of Michigan for the study of cerebral cortical development, evolution, and dysfunction.

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "O'Farrell"
  given-names: "Ethan"
  orcid: "https://orcid.org/0009-0008-3346-7121"
- family-names: "Qian"
  given-names: "Julia"
- family-names: "Qalieh"
  given-names: "Yaman"
  orcid: "https://orcid.org/0000-0003-0974-9686"
title: "kwanlibr"
version: 1.3.0
doi: 10.5281/zenodo.14617562
date-released: 2025-01-08
url: "https://github.com/thekwanlab/kwanlibr"

GitHub Events

Total
  • Issues event: 19
  • Delete event: 5
  • Issue comment event: 12
  • Push event: 29
  • Public event: 1
  • Pull request review event: 17
  • Pull request review comment event: 14
  • Pull request event: 9
  • Create event: 9
Last Year
  • Issues event: 19
  • Delete event: 5
  • Issue comment event: 12
  • Push event: 29
  • Public event: 1
  • Pull request review event: 17
  • Pull request review comment event: 14
  • Pull request event: 9
  • Create event: 9

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 15
  • Total pull requests: 7
  • Average time to close issues: 4 months
  • Average time to close pull requests: 2 days
  • Total issue authors: 1
  • Total pull request authors: 2
  • Average comments per issue: 0.53
  • Average comments per pull request: 0.86
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 13
  • Pull requests: 7
  • Average time to close issues: 23 days
  • Average time to close pull requests: 2 days
  • Issue authors: 1
  • Pull request authors: 2
  • Average comments per issue: 0.54
  • Average comments per pull request: 0.86
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • ofarrelle (14)
Pull Request Authors
  • xtian0329 (6)
  • ofarrelle (1)
Top Labels
Issue Labels
enhancement (1)
Pull Request Labels

Dependencies

DESCRIPTION cran
  • data.table * imports
  • ggplot2 * imports
  • ggrepel * imports
  • rtracklayer * imports