ibis.isdm

Modelling framework for creating Integrated SDMS

Science Score: 75.0%

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Keywords

bayesian biodiversity integrated-framework poisson-process scenarios sdm spatial-grain spatial-predictions species-distribution-modelling

Scientific Fields

Engineering Computer Science - 60% confidence

Last synced: 6 months ago · JSON representation ·

Repository

Modelling framework for creating Integrated SDMS

Basic Info

Host: GitHub
Owner: iiasa
License: cc-by-4.0
Language: R
Default Branch: master
Homepage: https://iiasa.github.io/ibis.iSDM/
Size: 430 MB

Statistics

Stars: 20
Watchers: 8
Forks: 3
Open Issues: 14
Releases: 10

Topics

bayesian biodiversity integrated-framework poisson-process scenarios sdm spatial-grain spatial-predictions species-distribution-modelling

Created about 5 years ago · Last pushed 8 months ago

Metadata Files

Readme Changelog License Citation

README.Rmd

---
output:
  rmarkdown::github_document:
    html_preview: no
---



```{r, echo = FALSE, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)
```

# The ibis framework - An **I**ntegrated model for **B**iod**I**versity distribution projection**S**





[![Lifecycle](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
[![r-cmd-check](https://github.com/iiasa/ibis.iSDM/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/iiasa/ibis.iSDM/actions/workflows/R-CMD-check.yaml)
[![License: CC BY 4.0](https://img.shields.io/badge/license-CC BY 4.0-blue.svg)](https://creativecommons.org/licenses/by/4.0/)
[![Codecov Status](https://codecov.io/gh/iiasa/ibis.iSDM/branch/master/graph/badge.svg)](https://app.codecov.io/gh/iiasa/ibis.iSDM?branch=master)
[![Published in](https://img.shields.io/badge/Ecological_Informatics-green?style=plastic&label=Published%20in&link=https%3A%2F%2Fdoi.org%2F10.1016%2Fj.ecoinf.2023.102127)](https://doi.org/10.1016/j.ecoinf.2023.102127)
[![ibis.iSDM status badge](https://iiasa.r-universe.dev/badges/ibis.iSDM)](https://iiasa.r-universe.dev/ibis.iSDM)
[![CRAN status](https://www.r-pkg.org/badges/version/ibis.iSDM)](https://CRAN.R-project.org/package=ibis.iSDM)

  
The **ibis.iSDM** package provides a series of convenience functions to fit integrated Species Distribution Models (iSDMs). With integrated models we generally refer to SDMs that incorporate information from different biodiversity datasets, external parameters such as priors or offsets with respect to certain variables and regions. See [Fletcher et al. (2019)](https://doi.org/10.1002/ecy.2710) and [Isaac et al. (2020)](https://linkinghub.elsevier.com/retrieve/pii/S0169534719302551) for an introduction to iSDMs.

## Installation

The latest version can be installed from GitHub. A CRAN release is planned, but 
in the meantime the package can be found on R-universe as well.

```{r gh-installation, eval = FALSE, message=FALSE}
# For installation (Not yet done)
install.packages("ibis.iSDM", repos = "https://iiasa.r-universe.dev")

# For Installation directly from github
install.packages("remotes")
remotes::install_github("IIASA/ibis.iSDM")
```

## Basic usage

See relevant [reference site](https://iiasa.github.io/ibis.iSDM/) and [articles](https://iiasa.github.io/ibis.iSDM/articles/01_train_simple_model.html).

Note that the package is in active development and parameters of some functions might change.

**Citation:**

Jung, Martin. 2023. “An Integrated Species Distribution Modelling Framework for Heterogeneous Biodiversity Data.” Ecological Informatics, 102127, [DOI](https://doi.org/10.1016/j.ecoinf.2023.102127)


## Acknowledgement 

**ibis.iSDM** is developed and maintained by the Biodiversity, Ecology and Conservation group at the International Institute for Applied Systems Analysis (IIASA), Austria.

## Contributors






All contributions to this project are gratefully acknowledged using the [`allcontributors` package](https://github.com/ropenscilabs/allcontributors) following the [all-contributors](https://allcontributors.org) specification. Contributions of any kind are welcome!









Martin-Jung






mhesselbarth






jeffreyhanson

Owner

Name: IIASA
Login: iiasa
Kind: organization
Email: github-owners@iiasa.ac.at
Location: Laxenburg, Austria

Website: https://www.iiasa.ac.at
Twitter: IIASAVienna
Repositories: 128
Profile: https://github.com/iiasa

International Institute for Applied Systems Analysis

Citation (CITATION.cff)

# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "ibis.iSDM" in publications use:'
type: software
license: CC-BY-4.0
title: 'ibis.iSDM: Modelling framework for integrated biodiversity distribution scenarios'
version: 0.1.6
abstract: Integrated framework of modelling the distribution of species and ecosystems
  in a suitability framing. This package allows the estimation of integrated species
  distribution models (iSDM) based on several sources of evidence and provided presence-only
  and presence-absence datasets. It makes heavy use of point-process models for estimating
  habitat suitability and allows to include spatial latent effects and priors in the
  estimation. To do so 'ibis.iSDM' supports a number of engines for Bayesian and more
  non-parametric machine learning estimation. Further, the 'ibis.iSDM' is specifically
  customized to support spatial-temporal projections of habitat suitability into the
  future.
authors:
- family-names: Jung
  given-names: Martin
  email: jung@iiasa.ac.at
  orcid: https://orcid.org/0000-0002-7569-1390
preferred-citation:
  type: article
  title: An integrated species distribution modelling framework for heterogeneous
    biodiversity data
  authors:
  - family-names: Jung
    given-names: Martin
    email: jung@iiasa.ac.at
    orcid: https://orcid.org/0000-0002-7569-1390
  journal: Ecological Informatics
  volume: '76'
  year: '2023'
  url: https://doi.org/10.1016/j.ecoinf.2023.102127
  start: '102127'
repository-code: https://github.com/iiasa/ibis.iSDM
url: https://iiasa.github.io/ibis.iSDM/
contact:
- family-names: Jung
  given-names: Martin
  email: jung@iiasa.ac.at
  orcid: https://orcid.org/0000-0002-7569-1390
keywords:
- bayesian
- biodiversity
- integrated-framework
- poisson-process
- scenarios
- sdm
- spatial-grain
- spatial-predictions
- species-distribution-modelling
references:
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  title: An integrated species distribution modelling framework for heterogeneous
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  year: '2025'
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  authors:
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  year: '2025'
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  notes: Imports
  url: https://parallelly.futureverse.org
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  year: '2025'
  doi: 10.32614/CRAN.package.parallelly
  version: '>= 1.30.0'
- type: software
  title: parallel
  abstract: 'R: A Language and Environment for Statistical Computing'
  notes: Imports
  authors:
  - name: R Core Team
  institution:
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    address: Vienna, Austria
  year: '2025'
- type: software
  title: foreach
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  notes: Imports
  url: https://github.com/RevolutionAnalytics/foreach
  repository: https://CRAN.R-project.org/package=foreach
  authors:
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  - family-names: Weston
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  year: '2025'
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  abstract: 'dplyr: A Grammar of Data Manipulation'
  notes: Imports
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    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
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    orcid: https://orcid.org/0000-0002-2444-4226
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  year: '2025'
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  notes: Imports
  url: https://ggplot2.tidyverse.org
  repository: https://CRAN.R-project.org/package=ggplot2
  authors:
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  year: '2025'
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  notes: Imports
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  - family-names: Hijmans
    given-names: Robert J.
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  notes: Imports
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  - family-names: Müller
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    email: kirill@cynkra.com
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  notes: Imports
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  year: '2025'
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  notes: Imports
  authors:
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  institution:
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    address: Vienna, Austria
  year: '2025'
- type: software
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  authors:
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  year: '2025'
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  notes: Suggests
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  - family-names: Scott
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  - family-names: Kursa
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  notes: Suggests
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  authors:
  - family-names: Hester
    given-names: Jim
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  abstract: 'cubelyr: A Data Cube ''dplyr'' Backend'
  notes: Suggests
  url: https://github.com/hadley/cubelyr
  repository: https://CRAN.R-project.org/package=cubelyr
  authors:
  - family-names: Wickham
    given-names: Hadley
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  year: '2025'
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  notes: Suggests
  url: https://github.com/vdorie/dbarts
  repository: https://CRAN.R-project.org/package=dbarts
  authors:
  - family-names: Dorie
    given-names: Vincent
    email: vdorie@gmail.com
    orcid: https://orcid.org/0000-0002-9576-3064
  - family-names: Chipman
    given-names: Hugh
    email: hugh.chipman@gmail.com
  - family-names: McCulloch
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  year: '2025'
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  notes: Suggests
  repository: https://CRAN.R-project.org/package=deldir
  authors:
  - family-names: Turner
    given-names: Rolf
  year: '2025'
  doi: 10.32614/CRAN.package.deldir
- type: software
  title: ellipsis
  abstract: 'ellipsis: Tools for Working with ...'
  notes: Suggests
  url: https://ellipsis.r-lib.org
  repository: https://CRAN.R-project.org/package=ellipsis
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@rstudio.com
  year: '2025'
  doi: 10.32614/CRAN.package.ellipsis
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  title: glmnet
  abstract: 'glmnet: Lasso and Elastic-Net Regularized Generalized Linear Models'
  notes: Suggests
  url: https://glmnet.stanford.edu
  repository: https://CRAN.R-project.org/package=glmnet
  authors:
  - family-names: Friedman
    given-names: Jerome
  - family-names: Hastie
    given-names: Trevor
    email: hastie@stanford.edu
  - family-names: Tibshirani
    given-names: Rob
  - family-names: Narasimhan
    given-names: Balasubramanian
  - family-names: Tay
    given-names: Kenneth
  - family-names: Simon
    given-names: Noah
  - family-names: Yang
    given-names: James
  year: '2025'
  doi: 10.32614/CRAN.package.glmnet
  version: '>= 4.1'
- type: software
  title: glmnetUtils
  abstract: 'glmnetUtils: Utilities for ''Glmnet'''
  notes: Suggests
  url: https://github.com/hongooi73/glmnetUtils
  repository: https://CRAN.R-project.org/package=glmnetUtils
  authors:
  - family-names: Ooi
    given-names: Hong
    email: hongooi73@gmail.com
  year: '2025'
  doi: 10.32614/CRAN.package.glmnetUtils
- type: software
  title: gnlm
  abstract: 'gnlm: Generalized Nonlinear Regression Models'
  notes: Suggests
  url: http://www.commanster.eu/rcode.html
  repository: https://CRAN.R-project.org/package=gnlm
  authors:
  - family-names: Swihart
    given-names: Bruce
    email: bruce.swihart@gmail.com
  - family-names: Lindsey
    given-names: Jim
    email: jlindsey@gen.unimaas.nl
  year: '2025'
  doi: 10.32614/CRAN.package.gnlm
- type: software
  title: geosphere
  abstract: 'geosphere: Spherical Trigonometry'
  notes: Suggests
  url: https://github.com/rspatial/geosphere/issues/
  repository: https://CRAN.R-project.org/package=geosphere
  authors:
  - family-names: Hijmans
    given-names: Robert J.
    email: r.hijmans@gmail.com
  year: '2025'
  doi: 10.32614/CRAN.package.geosphere
- type: software
  title: inlabru
  abstract: 'inlabru: Bayesian Latent Gaussian Modelling using INLA and Extensions'
  notes: Suggests
  url: http://www.inlabru.org
  repository: https://CRAN.R-project.org/package=inlabru
  authors:
  - family-names: Lindgren
    given-names: Finn
    email: finn.lindgren@gmail.com
    orcid: https://orcid.org/0000-0002-5833-2011
  - family-names: Bachl
    given-names: Fabian E.
    email: bachlfab@gmail.com
  year: '2025'
  doi: 10.32614/CRAN.package.inlabru
  version: '>= 2.10.0'
- type: software
  title: fmesher
  abstract: 'fmesher: Triangle Meshes and Related Geometry Tools'
  notes: Suggests
  url: https://inlabru-org.github.io/fmesher/
  repository: https://CRAN.R-project.org/package=fmesher
  authors:
  - family-names: Lindgren
    given-names: Finn
    email: finn.lindgren@gmail.com
    orcid: https://orcid.org/0000-0002-5833-2011
  year: '2025'
  doi: 10.32614/CRAN.package.fmesher
  version: '>= 0.1.7'
- type: software
  title: igraph
  abstract: 'igraph: Network Analysis and Visualization'
  notes: Suggests
  url: https://r.igraph.org/
  repository: https://CRAN.R-project.org/package=igraph
  authors:
  - family-names: Csárdi
    given-names: Gábor
    email: csardi.gabor@gmail.com
    orcid: https://orcid.org/0000-0001-7098-9676
  - family-names: Nepusz
    given-names: Tamás
    email: ntamas@gmail.com
    orcid: https://orcid.org/0000-0002-1451-338X
  - family-names: Traag
    given-names: Vincent
    orcid: https://orcid.org/0000-0003-3170-3879
  - family-names: Horvát
    given-names: Szabolcs
    email: szhorvat@gmail.com
    orcid: https://orcid.org/0000-0002-3100-523X
  - family-names: Zanini
    given-names: Fabio
    email: fabio.zanini@unsw.edu.au
    orcid: https://orcid.org/0000-0001-7097-8539
  - family-names: Noom
    given-names: Daniel
  - family-names: Müller
    given-names: Kirill
    email: kirill@cynkra.com
    orcid: https://orcid.org/0000-0002-1416-3412
  year: '2025'
  doi: 10.32614/CRAN.package.igraph
- type: software
  title: knitr
  abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
  notes: Suggests
  url: https://yihui.org/knitr/
  repository: https://CRAN.R-project.org/package=knitr
  authors:
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  year: '2025'
  doi: 10.32614/CRAN.package.knitr
- type: software
  title: mboost
  abstract: 'mboost: Model-Based Boosting'
  notes: Suggests
  url: https://github.com/boost-R/mboost
  repository: https://CRAN.R-project.org/package=mboost
  authors:
  - family-names: Hothorn
    given-names: Torsten
    email: Torsten.Hothorn@R-project.org
    orcid: https://orcid.org/0000-0001-8301-0471
  - family-names: Buehlmann
    given-names: Peter
    orcid: https://orcid.org/0000-0002-1782-6015
  - family-names: Kneib
    given-names: Thomas
    orcid: https://orcid.org/0000-0003-3390-0972
  - family-names: Schmid
    given-names: Matthias
    orcid: https://orcid.org/0000-0002-0788-0317
  - family-names: Hofner
    given-names: Benjamin
    orcid: https://orcid.org/0000-0003-2810-3186
  year: '2025'
  doi: 10.32614/CRAN.package.mboost
- type: software
  title: modEvA
  abstract: 'modEvA: Model Evaluation and Analysis'
  notes: Suggests
  url: http://modeva.r-forge.r-project.org/
  repository: https://CRAN.R-project.org/package=modEvA
  authors:
  - family-names: Barbosa
    given-names: A. Marcia
    email: ana.marcia.barbosa@gmail.com
  - family-names: Brown
    given-names: Jennifer A.
  - family-names: Jimenez-Valverde
    given-names: Alberto
  - family-names: Real
    given-names: Raimundo
  year: '2025'
  doi: 10.32614/CRAN.package.modEvA
- type: software
  title: matrixStats
  abstract: 'matrixStats: Functions that Apply to Rows and Columns of Matrices (and
    to Vectors)'
  notes: Suggests
  url: https://github.com/HenrikBengtsson/matrixStats
  repository: https://CRAN.R-project.org/package=matrixStats
  authors:
  - family-names: Bengtsson
    given-names: Henrik
    email: henrikb@braju.com
  year: '2025'
  doi: 10.32614/CRAN.package.matrixStats
- type: software
  title: progress
  abstract: 'progress: Terminal Progress Bars'
  notes: Suggests
  url: https://github.com/r-lib/progress#readme
  repository: https://CRAN.R-project.org/package=progress
  authors:
  - family-names: Csárdi
    given-names: Gábor
    email: csardi.gabor@gmail.com
  - family-names: FitzJohn
    given-names: Rich
  year: '2025'
  doi: 10.32614/CRAN.package.progress
- type: software
  title: pdp
  abstract: 'pdp: Partial Dependence Plots'
  notes: Suggests
  url: http://bgreenwell.github.io/pdp/
  repository: https://CRAN.R-project.org/package=pdp
  authors:
  - family-names: Greenwell
    given-names: Brandon M.
    email: greenwell.brandon@gmail.com
    orcid: https://orcid.org/0000-0002-8120-0084
  year: '2025'
  doi: 10.32614/CRAN.package.pdp
- type: software
  title: rmarkdown
  abstract: 'rmarkdown: Dynamic Documents for R'
  notes: Suggests
  url: https://pkgs.rstudio.com/rmarkdown/
  repository: https://CRAN.R-project.org/package=rmarkdown
  authors:
  - family-names: Allaire
    given-names: JJ
    email: jj@posit.co
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  - family-names: Dervieux
    given-names: Christophe
    email: cderv@posit.co
    orcid: https://orcid.org/0000-0003-4474-2498
  - family-names: McPherson
    given-names: Jonathan
    email: jonathan@posit.co
  - family-names: Luraschi
    given-names: Javier
  - family-names: Ushey
    given-names: Kevin
    email: kevin@posit.co
  - family-names: Atkins
    given-names: Aron
    email: aron@posit.co
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Chang
    given-names: Winston
    email: winston@posit.co
  - family-names: Iannone
    given-names: Richard
    email: rich@posit.co
    orcid: https://orcid.org/0000-0003-3925-190X
  year: '2025'
  doi: 10.32614/CRAN.package.rmarkdown
- type: software
  title: kissmig
  abstract: 'kissmig: a Keep It Simple Species Migration Model'
  notes: Suggests
  url: https://purl.oclc.org/wsl/kissmig
  repository: https://CRAN.R-project.org/package=kissmig
  authors:
  - family-names: Nobis
    given-names: Michael P.
    email: michael.nobis@wsl.ch
  year: '2025'
  doi: 10.32614/CRAN.package.kissmig
  version: '>= 2.0'
- type: software
  title: lubridate
  abstract: 'lubridate: Make Dealing with Dates a Little Easier'
  notes: Suggests
  url: https://lubridate.tidyverse.org
  repository: https://CRAN.R-project.org/package=lubridate
  authors:
  - family-names: Spinu
    given-names: Vitalie
    email: spinuvit@gmail.com
  - family-names: Grolemund
    given-names: Garrett
  - family-names: Wickham
    given-names: Hadley
  year: '2025'
  doi: 10.32614/CRAN.package.lubridate
  version: '>= 1.9.0'
- type: software
  title: rstan
  abstract: 'rstan: R Interface to Stan'
  notes: Suggests
  url: https://mc-stan.org/rstan/
  repository: https://CRAN.R-project.org/package=rstan
  authors:
  - family-names: Guo
    given-names: Jiqiang
    email: guojq28@gmail.com
  - family-names: Gabry
    given-names: Jonah
    email: jsg2201@columbia.edu
  - family-names: Goodrich
    given-names: Ben
    email: benjamin.goodrich@columbia.edu
  - family-names: Johnson
    given-names: Andrew
    email: andrew.johnson@arjohnsonau.com
  - family-names: Weber
    given-names: Sebastian
    email: sdw.post@waebers.de
  - family-names: Badr
    given-names: Hamada S.
    email: badr@jhu.edu
    orcid: https://orcid.org/0000-0002-9808-2344
  year: '2025'
  doi: 10.32614/CRAN.package.rstan
  version: '>= 2.21.0'
- type: software
  title: rstantools
  abstract: 'rstantools: Tools for Developing R Packages Interfacing with ''Stan'''
  notes: Suggests
  url: https://mc-stan.org/rstantools/
  repository: https://CRAN.R-project.org/package=rstantools
  authors:
  - family-names: Gabry
    given-names: Jonah
    email: jsg2201@columbia.edu
  - family-names: Goodrich
    given-names: Ben
    email: benjamin.goodrich@columbia.edu
  - family-names: Lysy
    given-names: Martin
    email: mlysy@uwaterloo.ca
  - family-names: Johnson
    given-names: Andrew
  year: '2025'
  doi: 10.32614/CRAN.package.rstantools
  version: '>= 2.1.1'
- type: software
  title: testthat
  abstract: 'testthat: Unit Testing for R'
  notes: Suggests
  url: https://testthat.r-lib.org
  repository: https://CRAN.R-project.org/package=testthat
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  year: '2025'
  doi: 10.32614/CRAN.package.testthat
  version: '>= 3.0.0'
- type: software
  title: xgboost
  abstract: 'xgboost: Extreme Gradient Boosting'
  notes: Suggests
  url: https://github.com/dmlc/xgboost
  repository: https://CRAN.R-project.org/package=xgboost
  authors:
  - family-names: Chen
    given-names: Tianqi
    email: tianqi.tchen@gmail.com
  - family-names: He
    given-names: Tong
    email: hetong007@gmail.com
  - family-names: Benesty
    given-names: Michael
    email: michael@benesty.fr
  - family-names: Khotilovich
    given-names: Vadim
    email: khotilovich@gmail.com
  - family-names: Tang
    given-names: Yuan
    email: terrytangyuan@gmail.com
    orcid: https://orcid.org/0000-0001-5243-233X
  - family-names: Cho
    given-names: Hyunsu
    email: chohyu01@cs.washington.edu
  - family-names: Chen
    given-names: Kailong
  - family-names: Mitchell
    given-names: Rory
  - family-names: Cano
    given-names: Ignacio
  - family-names: Zhou
    given-names: Tianyi
  - family-names: Li
    given-names: Mu
  - family-names: Xie
    given-names: Junyuan
  - family-names: Lin
    given-names: Min
  - family-names: Geng
    given-names: Yifeng
  - family-names: Li
    given-names: Yutian
  - family-names: Yuan
    given-names: Jiaming
    email: jm.yuan@outlook.com
  year: '2025'
  doi: 10.32614/CRAN.package.xgboost

GitHub Events

Total

Create event: 4
Issues event: 8
Release event: 2
Watch event: 2
Issue comment event: 13
Push event: 48
Pull request review comment event: 1
Pull request event: 3
Fork event: 2

Last Year

Create event: 4
Issues event: 8
Release event: 2
Watch event: 2
Issue comment event: 13
Push event: 48
Pull request review comment event: 1
Pull request event: 3
Fork event: 2

Committers

Last synced: 7 months ago

All Time

Total Commits: 560
Total Committers: 4
Avg Commits per committer: 140.0
Development Distribution Score (DDS): 0.221

Past Year

Commits: 60
Committers: 2
Avg Commits per committer: 30.0
Development Distribution Score (DDS): 0.217

Top Committers

Name	Email	Commits
Martin Jung	m**g@z**m	436
mhesselbarth	m**h@g**m	102
HESSELBARTH Maximilian	h**h@i**t	21
Jeff Hanson	j**n@u**u	1

Committer Domains (Top 20 + Academic)

uqconnect.edu.au: 1 iiasa.ac.at: 1 zoho.com: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time

Total issues: 84
Total pull requests: 52
Average time to close issues: 4 months
Average time to close pull requests: about 2 hours
Total issue authors: 10
Total pull request authors: 5
Average comments per issue: 2.25
Average comments per pull request: 0.42
Merged pull requests: 48
Bot issues: 0
Bot pull requests: 0

Past Year

Issues: 6
Pull requests: 3
Average time to close issues: 22 days
Average time to close pull requests: about 5 hours
Issue authors: 2
Pull request authors: 1
Average comments per issue: 0.33
Average comments per pull request: 0.0
Merged pull requests: 3
Bot issues: 0
Bot pull requests: 0

View more stats

Top Authors

Issue Authors

Martin-Jung (49)
mhesselbarth (15)
jeffreyhanson (7)
Daviser95 (2)
cwaldock1 (2)
simonrolph (1)
ChengchengZhang91 (1)
ManuelSpinola (1)
king0708 (1)
ggrittz (1)

Pull Request Authors

Martin-Jung (49)
mhesselbarth (14)
jeffreyhanson (2)
xiewei18 (2)
matthewlewis896 (1)

Top Labels

Issue Labels

enhancement (25) bug (18) Quality of life (14) low priority (10) improvement (8) help wanted (6) documentation (5) Feature request (4) invalid (3) good first issue (2) question (2) priority (2) wontfix (1)

Pull Request Labels

Packages

Total packages: 2
Total downloads: unknown

Total dependent packages: 0
(may contain duplicates)
Total dependent repositories: 0
(may contain duplicates)
Total versions: 20

proxy.golang.org: github.com/iiasa/ibis.iSDM

Documentation: https://pkg.go.dev/github.com/iiasa/ibis.iSDM#section-documentation
License: cc-by-4.0
Latest release: v0.1.6
published 9 months ago

Versions: 10
Dependent Packages: 0
Dependent Repositories: 0

Rankings

Dependent packages count: 5.4%

Average: 5.6%

Dependent repos count: 5.8%

Last synced: 6 months ago

proxy.golang.org: github.com/iiasa/ibis.isdm

Documentation: https://pkg.go.dev/github.com/iiasa/ibis.isdm#section-documentation
License: cc-by-4.0
Latest release: v0.1.6
published 9 months ago

Versions: 10
Dependent Packages: 0
Dependent Repositories: 0

Rankings

Dependent packages count: 5.4%

Average: 5.6%

Dependent repos count: 5.8%

Last synced: 6 months ago

Dependencies

.github/workflows/R-CMD-check.yaml actions

actions/checkout v3 composite
actions/upload-artifact main composite
r-lib/actions/check-r-package v2 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/Render-README.yaml actions

actions/checkout v3 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/codecov.yaml actions

actions/checkout v3 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/pkgdown.yaml actions

JamesIves/github-pages-deploy-action v4.4.1 composite
actions/checkout v3 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/update-citation-cff.yaml actions

actions/checkout v3 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

DESCRIPTION cran

R >= 4.0.0 depends
Rcpp >= 0.12.0 imports
RcppParallel >= 5.0.1 imports
assertthat >= 0.2.0 imports
doFuture >= 0.12.2 imports
foreach * imports
future >= 1.23.0 imports
geodist * imports
ggplot2 * imports
magrittr * imports
methods * imports
ncdf4 * imports
parallel * imports
posterior * imports
proto >= 1.0.0 imports
raster >= 3.4 imports
rgdal >= 1.5 imports
rgeos >= 0.5 imports
sf >= 0.9 imports
stars >= 0.5 imports
testthat >= 3.0.0 imports
tibble >= 2.0.0 imports
uuid * imports
BoomSpikeSlab >= 1.2.4 suggests
covr * suggests
dbarts >= 0.9 suggests
deldir * suggests
doParallel * suggests
ellipsis * suggests
knitr * suggests
mboost * suggests
modEvA * suggests
progress * suggests
rmarkdown * suggests
rstan >= 2.21.0 suggests
rstantools >= 2.1.1 suggests
xgboost * suggests