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cmlxom

https://salsa.debian.org/java-team/cmlxom

Science Score: 41.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ✓
    DOI references
    Found 3 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.9%) to scientific vocabulary
Last synced: 10 months ago · JSON representation ·

Repository

Basic Info
  • Host: salsa.debian.org
  • Owner: java-team
  • License: apache-2.0
  • Default Branch: master
Statistics
  • Stars: 0
  • Forks: 2
  • Open Issues:
  • Releases: 0
Created over 6 years ago
Metadata Files
Readme License Citation

README.md

CMLXOM

Maven Central Build Status DOI codecov

A Java library for processing CML, implementing the XML object model (XOM) for the Chemical Markup Language (CML).

Releases

Instructions to increase the version:

shell mvn versions:set -DnewVersion=4.14-SNAPSHOT

Deploy to Sonatype with the following commands, for snapshots and releases respectively:

shell mvn clean deploy

Owner

  • Name: Debian Java Maintainers
  • Login: java-team
  • Kind: organization

Java Team repositories, coordination on debian-java@lists.debian.org and IRC #debian-java. https://java.debian.net Please use this repository creation script: https://salsa.debian.org/java-team/pkg-java-scripts/raw/master/setup-salsa-repository

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
title: CMLXOM
version: 4.13
date-released: 2025-07-20
url: "https://github.com/BlueObelisk/cmlxom"
preferred-citation:
  type: article
  authors:
    - family-names: Murray-Rust
      given-names: Peter
    - family-names: Rzepa
      given-names: Henry S.
  title: "CML: Evolution and design"
  year: 2011
  month: 10
  day: 14
  journal: Journal of Cheminformatics
  volume: 3
  issue: 44
  doi: 10.1186/1758-2946-3-44
  url: https://doi.org/10.1186/1758-2946-3-44

Dependencies

pom.xml maven
  • commons-io:commons-io 2.11.0
  • joda-time:joda-time 2.10.14
  • junit:junit 4.13.2
  • org.apache.logging.log4j:log4j-1.2-api 2.17.2
  • org.blueobelisk:euclid 2.1
  • org.ccil.cowan.tagsoup:tagsoup 1.2.1
  • xml-apis:xml-apis 1.4.01
  • xom:xom 1.3.7