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twopercenters

https://github.com/notebook-factory/twopercenters

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (5.9%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: Notebook-Factory
  • Language: Jupyter Notebook
  • Default Branch: main
  • Size: 8.57 MB
Statistics
  • Stars: 0
  • Watchers: 3
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created over 2 years ago · Last pushed over 1 year ago
Metadata Files
Readme Citation

README.md

twopercenters

  • Create dokku es service

``` sudo dokku plugin:install https://github.com/dokku/dokku-elasticsearch.git elasticsearch

```

export ELASTICSEARCH_IMAGE="elasticsearch" export ELASTICSEARCH_IMAGE_VERSION="7.17.23" dokku elasticsearch:create citedb

  • This should start the service, run dokku elasticsearch:info citedb to figure out IP and port and figure out the service URL (e.g, 172.17.0.3:9200). You can test it by curl -X GET http://172.17.0.3:9200. If that works, in the .env file:

ES_URL_LOCAL=http://172.17.0.3:9200

[!NOTE] This is to help indexing script access the elasticsearch service before the deployment. After the app is created and citedb service is linked to it, ELASTICSEARCH_URL=http://dokku-elasticsearch-citedb:9200 will be exposed to the ENV of the application (see citations_lib/utils.py).

  • You need to create a python virtual environment that has dependencies of this repo installed. Once you activate it, then:

python elasticSearchIdx.py

once it is completed, test by:

curl http://172.17.0.3:9200/_cat/indices

you should see something like:

green open .geoip_databases zBjMlIZhSliA1rp181gxzA 1 0 33 0 30.9mb 30.9mb yellow open career_cntry 4U3Yq18MTxu5NG0auwe8Sw 1 1 177 0 1.4mb 1.4mb yellow open singleyr_inst JdbErfi6T5KpO00MtWG0-Q 1 1 30137 0 91.9mb 91.9mb yellow open career _rlmlssYQjOqBt2mgBLbcA 1 1 270910 0 352.8mb 352.8mb yellow open career_inst 7_46VzV4Rf6j_6zzo4ZHbA 1 1 38123 0 114.9mb 114.9mb yellow open singleyr -NDFaaJ1Sdyis6eFVb4aRA 1 1 285533 0 331.1mb 331.1mb yellow open singleyr_cntry EFEqBE6ERNGrUjrhTRbIYg 1 1 176 0 1.1mb 1.1mb yellow open career_field rJ6SsU1XSp-1vXgeHjUbcg 1 1 23 0 234.3kb 234.3kb yellow open singleyr_field KBG7FfvhSNubbSQZE2jruw 1 1 23 0 179.7kb 179.7kb

  • Now you can deploy the application:

``` cd twopercenters dokku apps:create twopercenters dokku elasticsearch:link citedb twopercenters

git remote add dokku dokku@[vm.floating.ip]:my-dashboard git push dokku main:master ```

if successful:

dokku letsencrypt:enable twopercenters

Owner

  • Name: NotebookFactory
  • Login: Notebook-Factory
  • Kind: organization

Citation (citations_lib/__init__.py) 


      

    

  


    
    
    
      

    
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Dependencies


    

      

        requirements.txt
        
          pypi
        
      

      
    
            
  • 
              Flask_Caching
              ==2.0.2
              
              
            
    • 
            
  • 
              country_converter
              ==1.0.0
              
              
            
    • 
            
  • 
              dash
              ==2.8.1
              
              
            
    • 
            
  • 
              dash_bootstrap_components
              ==1.3.1
              
              
            
    • 
            
  • 
              dash_daq
              ==0.5.0
              
              
            
    • 
            
  • 
              elasticsearch
              *
              
              
            
    • 
            
  • 
              gunicorn
              *
              
              
            
    • 
            
  • 
              ipython
              ==8.11.0
              
              
            
    • 
            
  • 
              numpy
              ==1.21.5
              
              
            
    • 
            
  • 
              openpyxl
              ==3.0.10
              
              
            
    • 
            
  • 
              pandas
              ==1.5.2
              
              
            
    • 
            
  • 
              plotly
              ==5.13.0
              
              
            
    • 
            
  • 
              python-dotenv
              *
              
              
            
    •