basictreeplots.jl
Basic plotting recipes for trees
Science Score: 54.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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✓Academic publication links
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○Academic email domains
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○Scientific vocabulary similarity
Low similarity (12.5%) to scientific vocabulary
Repository
Basic plotting recipes for trees
Basic Info
- Host: GitHub
- Owner: BenjaminDoran
- License: bsd-3-clause
- Language: Julia
- Default Branch: main
- Homepage: https://benjamindoran.github.io/BasicTreePlots.jl/
- Size: 3.2 MB
Statistics
- Stars: 8
- Watchers: 1
- Forks: 1
- Open Issues: 10
- Releases: 1
Metadata Files
README.md
BasicTreePlots
This is a package that aims to provide generic plotting recipes for tree like data structures.
As such the recipes should only require that your data structure fulfills the AbstractTrees interface,
i.e. has AbstractTrees.children(YourType) defined.
Optionally, BasicTreePlots.distance(YourType) and BasicTreePlots.label(YourType) can be defined to allow plotting trees
with variable distances between children and parent nodes and pretty printing of each node in the tree respectively.
Currently, we only provide Makie.jl backends, but are interested in contributions for recipes for Plots.jl and TidyPlots.jl.
As well as any other backends or custom tree structures that don't work automatically.
See the ext folder for example extensions.
Installation
{julia}
using Pkg
Pkg.add("BasicTreePlots")
Or the development version with
{julia}
using Pkg
Pkg.add("https://github.com/BenjaminDoran/BasicTreePlots.jl.git")
Basic usage
{julia}
using CairoMakie, BasicTreePlots
tree = ((:a, :b), (:c, :d))
treeplot(tree)
See Documentation for more details.
How to Cite
If you use BasicTreePlots.jl in your work, please cite using the reference given in CITATION.cff.
Contributing
If you want to make contributions of any kind, please first that a look into our contributing guide directly on GitHub or the contributing page on the website
Contributors
Owner
- Name: Benjamin Doran
- Login: BenjaminDoran
- Kind: user
- Location: Chicago, IL
- Company: UChicago
- Website: https://benjamindoran.github.io/
- Repositories: 2
- Profile: https://github.com/BenjaminDoran
PhD Student - Computational Biology
Citation (CITATION.bib)
@misc{BasicTreePlots.jl,
author = {Benjamin Doran and collaborators},
title = {BasicTreePlots.jl},
url = {https://github.com/BenjaminDoran/BasicTreePlots.jl},
version = {v1.0.0-DEV},
year = {2024},
month = {4}
}
GitHub Events
Total
- Create event: 13
- Release event: 1
- Issues event: 6
- Watch event: 6
- Delete event: 3
- Issue comment event: 20
- Push event: 20
- Pull request event: 16
- Fork event: 1
Last Year
- Create event: 13
- Release event: 1
- Issues event: 6
- Watch event: 6
- Delete event: 3
- Issue comment event: 20
- Push event: 20
- Pull request event: 16
- Fork event: 1
Issues and Pull Requests
Last synced: 9 months ago
All Time
- Total issues: 5
- Total pull requests: 12
- Average time to close issues: less than a minute
- Average time to close pull requests: 2 days
- Total issue authors: 3
- Total pull request authors: 4
- Average comments per issue: 0.0
- Average comments per pull request: 0.17
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 9
Past Year
- Issues: 5
- Pull requests: 12
- Average time to close issues: less than a minute
- Average time to close pull requests: 2 days
- Issue authors: 3
- Pull request authors: 4
- Average comments per issue: 0.0
- Average comments per pull request: 0.17
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 9
Top Authors
Issue Authors
- cvigilv (3)
- BenjaminDoran (1)
- JuliaTagBot (1)
Pull Request Authors
- github-actions[bot] (6)
- dependabot[bot] (3)
- cvigilv (2)
- BenjaminDoran (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
- Total downloads: unknown
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 1
juliahub.com: BasicTreePlots
Basic plotting recipes for trees
- Homepage: https://benjamindoran.github.io/BasicTreePlots.jl/
- Documentation: https://docs.juliahub.com/General/BasicTreePlots/stable/
- License: BSD-3-Clause
-
Latest release: 0.1.0
published over 1 year ago
Rankings
Dependencies
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- codecov/codecov-action v3 composite
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- julia-actions/cache v2 composite
- julia-actions/setup-julia v2 composite
- actions/checkout v4 composite
- julia-actions/cache v2 composite
- julia-actions/setup-julia v2 composite
- actions/cache v4 composite
- actions/checkout v4 composite
- actions/setup-python v5 composite
- julia-actions/cache v2 composite
- julia-actions/julia-buildpkg v1 composite
- julia-actions/setup-julia v2 composite
- lycheeverse/lychee-action v2 composite
- actions/checkout v4 composite
- actions/setup-python v5 composite
- peter-evans/create-pull-request v7 composite
- julia-actions/RegisterAction latest composite
- actions/checkout v4 composite
- codecov/codecov-action v4 composite
- julia-actions/cache v2 composite
- julia-actions/julia-buildpkg v1 composite
- julia-actions/julia-processcoverage v1 composite
- julia-actions/julia-runtest v1 composite
- julia-actions/setup-julia v2 composite
- JuliaRegistries/TagBot v1 composite