ProbNumDiffEq.jl - v0.16.4

ProbNumDiffEq v0.16.4

Diff since v0.16.3

Merged pull requests: - CompatHelper: bump compat for TaylorSeries to 0.20, (keep existing compat) (#344) (@github-actions[bot]) - Fix the DAE example (#345) (@nathanaelbosch) - Add analytics to the docs (#346) (@nathanaelbosch) - Bump actions/checkout from 4 to 5 (#347) (@dependabot[bot]) - Fix a bugs with jetcoeffs! and ODEFunction (#348) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] 6 months ago

ProbNumDiffEq.jl - v0.16.3

ProbNumDiffEq v0.16.3

Diff since v0.16.2

Merged pull requests: - CompatHelper: bump compat for DiffEqCallbacks to 4 and drop 2.3.6 (#331) (@github-actions[bot]) - Update tests (#332) (@ChrisRackauckas) - CompatHelper: bump compat for StructArrays to 0.7, (keep existing compat) (#333) (@github-actions[bot]) - Bump codecov/codecov-action from 4 to 5 (#334) (@dependabot[bot]) - Fix two failing tests (#335) (@nathanaelbosch) - Update to use ADTypes for specifying AD backend (#338) (@jClugstor) - CompatHelper: bump compat for ForwardDiff to 1, (keep existing compat) (#340) (@github-actions[bot]) - CompatHelper: bump compat for TaylorSeries to 0.19, (keep existing compat) (#341) (@github-actions[bot]) - CompatHelper: bump compat for TaylorIntegration to 0.17, (keep existing compat) (#342) (@github-actions[bot])

Closed issues: - Is there a reason "Parallel-in-time Probabilistic Numerical ODE Solvers" has not been implemented in this package? (#336)

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Published by github-actions[bot] 10 months ago

ProbNumDiffEq.jl - v0.16.2

ProbNumDiffEq v0.16.2

Diff since v0.16.1

Merged pull requests: - Improvements based on review (#328) (@nathanaelbosch) - Minor fix on paper and bibtex (#330) (@jbytecode)

Closed issues: - JOSS manuscript review (#323) - JOSS review: installation error (#324) - JOSS review (#327)

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Published by github-actions[bot] over 1 year ago

ProbNumDiffEq.jl - v0.16.1

ProbNumDiffEq v0.16.1

Diff since v0.16.0

Merged pull requests: - Remove type piracies; upgrade to PSDMatrices v0.5.0 (#316) (@nathanaelbosch) - Fix the solution sampling code (#317) (@nathanaelbosch) - CompatHelper: bump compat for TaylorSeries to 0.18, (keep existing compat) (#320) (@github-actions[bot]) - CompatHelper: bump compat for TaylorIntegration to 0.16, (keep existing compat) (#321) (@github-actions[bot]) - Update to OrdinaryDiffEq split version (#326) (@ChrisRackauckas)

Closed issues: - Fix type piracies (#278) - Use Gaussian as Initial Condition (#318)

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Published by github-actions[bot] over 1 year ago

ProbNumDiffEq.jl - v0.16.0

ProbNumDiffEq v0.16.0

Diff since v0.15.0

Merged pull requests: - Add the DiagonalEK1 (#301) (@nathanaelbosch) - CompatHelper: bump compat for DiffEqCallbacks to 3, (keep existing compat) (#304) (@github-actions[bot]) - Change the ordering of the state-space model (#305) (@nathanaelbosch) - Use ExtendedTestSets.jl (#306) (@nathanaelbosch) - CompatHelper: bump compat for TaylorSeries to 0.17, (keep existing compat) (#307) (@github-actions[bot]) - CompatHelper: bump compat for TaylorIntegration to 0.15, (keep existing compat) (#308) (@github-actions[bot]) - Update the docs to work with MTK v9 and add compat (#309) (@nathanaelbosch) - Bump julia-actions/setup-julia from 1 to 2 (#310) (@dependabot[bot]) - Fix some tests due to an MTK update (and something related to FiniteDiff.jl) (#311) (@nathanaelbosch) - CompatHelper: bump compat for FastBroadcast to 0.3, (keep existing compat) (#312) (@github-actions[bot]) - CompatHelper: bump compat for BlockArrays in [weakdeps] to 1, (keep existing compat) (#313) (@github-actions[bot]) - Fix errors relating to RecursiveArrayTools, Base.stack, and GaussianDistributions.jl (#314) (@nathanaelbosch)

Closed issues: - Memory leaking when computing gradients (#249) - Make the DiagonalEK1 work for SecondOrderODEs (#302)

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Published by github-actions[bot] over 1 year ago

ProbNumDiffEq.jl - v0.15.0

ProbNumDiffEq v0.15.0

Diff since v0.14.0

Merged pull requests: - Implement a DataUpdateCallback (#287) (@nathanaelbosch) - Improve type stability (#288) (@nathanaelbosch) - Add dependabot (#289) (@nathanaelbosch) - Refactor the plotting in favor of a Gaussian plot recipe (#291) (@nathanaelbosch) - CompatHelper: bump compat for TaylorSeries to 0.16, (keep existing compat) (#292) (@github-actions[bot]) - Bump actions/checkout from 1 to 4 (#294) (@dependabot[bot]) - Bump codecov/codecov-action from 1 to 4 (#295) (@dependabot[bot]) - Bump actions/cache from 1 to 4 (#296) (@dependabot[bot]) - Fix the failing github action tests (#297) (@nathanaelbosch) - Implement observation noise for the PN likelihood (#299) (@nathanaelbosch)

Closed issues: - Memory leaking when computing gradients (#249) - Plotting a MeanProbODESolution doesn't work (#290) - Add an API to specify non-zero observation noise (#298)

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Published by github-actions[bot] about 2 years ago

ProbNumDiffEq.jl - v0.14.0

ProbNumDiffEq v0.14.0

Diff since v0.13.1

Merged pull requests: - Add JET.jl to the testing (#261) (@nathanaelbosch) - Use FiniteHorizonGramians.jl (#268) (@nathanaelbosch) - Compute the PN log-likelihood in the solver (#281) (@nathanaelbosch) - Remove some more PSDMatrix.jl type piracy (#282) (@nathanaelbosch) - Drop 1.6 support (#283) (@nathanaelbosch) - CompatHelper: bump compat for FiniteHorizonGramians to 0.2, (keep existing compat) (#285) (@github-actions[bot]) - Refactor the prior implementation (#286) (@nathanaelbosch)

Closed issues: - Use FiniteHorizonGramians.jl (#256) - Try adding JET.jl to the tests (#258)

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Published by github-actions[bot] about 2 years ago

ProbNumDiffEq.jl - v0.13.1

ProbNumDiffEq v0.13.1

Diff since v0.13.0

Merged pull requests: - Make ClassicSovlerInit use backward transitions and completely remove smooth! from the package (#262) (@nathanaelbosch) - Analytically compute the square root of the IWP transition covariance (#264) (@nathanaelbosch) - Towards a more modular state init by adding more options (#266) (@nathanaelbosch) - Add a simple Hodghin-Huxley benchmark (#267) (@nathanaelbosch) - More and better benchmarks (#269) (@nathanaelbosch) - Fix the EK0 for SecondOrderODEProblems (#270) (@nathanaelbosch) - Refactor the solution projection for the Kronecker EK0 for second-order ODEs a bit (#271) (@nathanaelbosch) - Fix Downstream CI by only testing Fenrir's "Downstream" tests (#272) (@nathanaelbosch) - Fix some incremental compilation error (#274) (@nathanaelbosch) - Add vale.sh to fix documentation for typos and more (#275) (@nathanaelbosch) - Add workflow to clean the documenter PR preview (#276) (@nathanaelbosch) - CompatHelper: bump compat for RecursiveArrayTools to 3, (keep existing compat) (#280) (@github-actions[bot])

Closed issues: - Reduce compilation times of the package (#91) - Use IntegratedWienerProcesses.jl? (#257) - Remove smooth! and replace it's usage with backward kernels in the classic solver init (#259) - Calibration with FixedDiffusion and FixedMVDiffusion is broken with adaptive steps (#273)

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Published by github-actions[bot] about 2 years ago

ProbNumDiffEq.jl - v0.13.0

ProbNumDiffEq v0.13.0

Diff since v0.12.1

Merged pull requests: - CompatHelper: bump compat for TaylorIntegration to 0.12, (keep existing compat) (#237) (@github-actions[bot]) - CompatHelper: bump compat for TaylorIntegration to 0.13, (keep existing compat) (#239) (@github-actions[bot]) - Kronecker EK0 (#243) (@nathanaelbosch) - CompatHelper: bump compat for SciMLBase to 2, (keep existing compat) (#246) (@github-actions[bot]) - CompatHelper: bump compat for FastGaussQuadrature to 1, (keep existing compat) (#247) (@github-actions[bot]) - Fix the CI (#248) (@nathanaelbosch) - Add Pleiades as a second-order ODE benchmark (#250) (@nathanaelbosch) - Use idxs instead of vars for plotting (#252) (@nathanaelbosch) - CompatHelper: add new compat entry for Statistics at version 1, (keep existing compat) (#260) (@github-actions[bot]) - Add justfile to support using just to run things (#263) (@nathanaelbosch) - Add LinearAlgebra.jl compat (#265) (@nathanaelbosch)

Closed issues: - Remove vars plotting keyword in favor of idxs (#251)

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Published by github-actions[bot] over 2 years ago

ProbNumDiffEq.jl - v0.12.1

ProbNumDiffEq v0.12.1

Diff since v0.12.0

Merged pull requests: - Documentation updates (#242) (@nathanaelbosch) - CompatHelper: bump compat for TaylorIntegration to 0.14, (keep existing compat) (#244) (@github-actions[bot]) - Use DocumenterCitations.jl to manage references (#245) (@nathanaelbosch)

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Published by github-actions[bot] over 2 years ago

ProbNumDiffEq.jl - v0.12.0

ProbNumDiffEq v0.12.0

Diff since v0.11.2

Merged pull requests: - Add 1.9 to tests (#240) (@nathanaelbosch) - Probabilistic Exponential Integrators (#241) (@nathanaelbosch)

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Published by github-actions[bot] over 2 years ago

ProbNumDiffEq.jl - v0.11.2

ProbNumDiffEq v0.11.2

Diff since v0.11.1

Merged pull requests: - Add a parameter inference example to the docs (#233) (@nathanaelbosch) - Update link to the ManifoldProjection docs (#234) (@DaniGlez) - Migrate from SnoopPrecompile to PrecompileTools (#235) (@timholy) - CompatHelper: bump compat for TaylorSeries to 0.15, (keep existing compat) (#236) (@github-actions[bot]) - overload algautodiff (#238) (@vpuri3)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 3 years ago

ProbNumDiffEq.jl - v0.11.1

ProbNumDiffEq v0.11.1

Diff since v0.11.0

Merged pull requests: - Correctly compute the Jacobian at the predicted state (#232) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 3 years ago

ProbNumDiffEq.jl - v0.11.0

ProbNumDiffEq v0.11.0

Diff since v0.10.2

Merged pull requests: - Split up discretize_sqrt to make profiling easier; and speed up some stuff (#227) (@nathanaelbosch) - Fix a bug in the sampling (#229) (@nathanaelbosch) - README updates (#230) (@nathanaelbosch) - Backward Kernels (#231) (@nathanaelbosch)

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Published by github-actions[bot] almost 3 years ago

ProbNumDiffEq.jl - v0.10.2

ProbNumDiffEq v0.10.2

Diff since v0.10.1

Merged pull requests: - CompatHelper: bump compat for TaylorSeries to 0.14, (keep existing compat) (#224) (@github-actions[bot]) - Add dependabot (#225) (@nathanaelbosch) - Simplify triangularize! a bit (#226) (@nathanaelbosch) - Small speed-ups for solvers with FixedDiffusion() (#228) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 3 years ago

ProbNumDiffEq.jl - v0.10.1

ProbNumDiffEq v0.10.1

Diff since v0.10.0

Merged pull requests: - Split the "solver" page in the documentation to make it easier to see where to find what (#220) (@nathanaelbosch) - Change the keyword argument from init_on_du to init_on_ddu (#222) (@nathanaelbosch)

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Published by github-actions[bot] almost 3 years ago

ProbNumDiffEq.jl - v0.10.0

ProbNumDiffEq v0.10.0

Diff since v0.9.3

Merged pull requests: - Better benchmarks with Weave.jl (#215) (@nathanaelbosch) - Clean up the src/ProbNumDiffEq.jl file a bit (#217) (@nathanaelbosch) - Use SimpleUnPack (#218) (@devmotion) - Add a DAE benchmark: ROBER (#219) (@nathanaelbosch) - CompatHelper: bump compat for ToeplitzMatrices to 0.8, (keep existing compat) (#221) (@github-actions[bot]) - Rename destats to stats (#223) (@nathanaelbosch)

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Published by github-actions[bot] almost 3 years ago

ProbNumDiffEq.jl - v0.9.3

ProbNumDiffEq v0.9.3

Diff since v0.9.2

Merged pull requests: - Add Matern priors and refactor priors a bit more (#214) (@nathanaelbosch) - Bugfix: Add StaticArrayInterface and update the prepare_alg function (#216) (@nathanaelbosch)

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Published by github-actions[bot] almost 3 years ago

ProbNumDiffEq.jl - v0.9.2

ProbNumDiffEq v0.9.2

Diff since v0.9.1

Merged pull requests: - QR is now triangularize + remove some more preallocations (#211) (@nathanaelbosch) - Some code optimizations with Octavian.jl and FastBroadcast.jl (#212) (@nathanaelbosch) - Fix bug with fixed steps where transitions were not recomputed (#213) (@nathanaelbosch)

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Published by github-actions[bot] about 3 years ago

ProbNumDiffEq.jl - v0.9.1

ProbNumDiffEq v0.9.1

Diff since v0.9.0

Closed issues: - std doesn't work (#209)

Merged pull requests: - Document the new prior option, at least a bit (#206) (@nathanaelbosch) - CompatHelper: bump compat for TaylorSeries to 0.13, (keep existing compat) (#207) (@github-actions[bot]) - CompatHelper: bump compat for TaylorIntegration to 0.11, (keep existing compat) (#208) (@github-actions[bot]) - Implement var and std for Gaussians (#210) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 3 years ago

ProbNumDiffEq.jl - v0.9.0

ProbNumDiffEq v0.9.0

Diff since v0.8.6

Merged pull requests: - Add downstream test to make sure I don't break Fenrir.jl (#193) (@nathanaelbosch) - CompatHelper: bump compat for SpecialMatrices to 3 (#198) (@github-actions[bot]) - Change return codes from symbol to type (#199) (@nathanaelbosch) - Make the prior a kwarg and refactor the transition matrix parts (#200) (@nathanaelbosch) - Remove a transpose that should be a bug (#201) (@nathanaelbosch) - Build a cache inside the ODE solution so make interpolation easier (#202) (@nathanaelbosch) - A New Prior: Integrated Ornstein Uhlenbeck Processes (#203) (@nathanaelbosch) - Add another overloaded function to the dev docs (#204) (@nathanaelbosch) - Remove the EK1FDB (#205) (@nathanaelbosch)

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Published by github-actions[bot] about 3 years ago

ProbNumDiffEq.jl - v0.8.6

ProbNumDiffEq v0.8.6

Diff since v0.8.5

Merged pull requests: - Introduce "measurement models" to simplify some code (#185) (@nathanaelbosch) - Add a make_new_transitions check before building transitions (#190) (@nathanaelbosch) - Introduce xprev, mimicking OrdinaryDiffEq.jl's use of uprev (#191) (@nathanaelbosch) - Refactor prior (#192) (@nathanaelbosch) - CompatHelper: bump compat for TaylorIntegration to 0.10, (keep existing compat) (#195) (@github-actions[bot])

EDIT: This list is not correct! The patch release has been made from an older branch.

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Published by github-actions[bot] about 3 years ago

ProbNumDiffEq.jl - v0.8.5

ProbNumDiffEq v0.8.5

Diff since v0.8.4

Merged pull requests: - More robust tmp_cache dispatch (#189) (@ChrisRackauckas)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 3 years ago

ProbNumDiffEq.jl - v0.8.4

ProbNumDiffEq v0.8.4

Diff since v0.8.3

Merged pull requests: - Structure the tests into test groups (#177) (@nathanaelbosch) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#182) (@github-actions[bot]) - Reduce allocations (#183) (@nathanaelbosch) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#184) (@github-actions[bot]) - Test DiffEqDevTools.jl a bit better (#186) (@nathanaelbosch) - Fix bug in the initialization via classic solvers (#187) (@nathanaelbosch) - Run the benchmarks (#188) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 3 years ago

ProbNumDiffEq.jl - v0.8.3

ProbNumDiffEq v0.8.3

Diff since v0.8.2

Merged pull requests: - Fix the spelling in prob_ode_lotkavolterra (#175) (@nathanaelbosch) - Document how OrdinaryDiffEq.jl is built on (#176) (@nathanaelbosch) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#178) (@github-actions[bot]) - Correct the installation in README and docs (#179) (@nathanaelbosch) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#180) (@github-actions[bot]) - Fix SciML v1.51.0 issues with the new ODEProblem definition (#181) (@nathanaelbosch)

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Published by github-actions[bot] over 3 years ago

ProbNumDiffEq.jl - v0.8.2

ProbNumDiffEq v0.8.2

Diff since v0.8.1

Merged pull requests: - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#171) (@github-actions[bot]) - Switch to ODEProblemLibrary.jl (#172) (@nathanaelbosch) - Precompile better with SnoopPrecompile.jl (#173) (@nathanaelbosch) - Test with Julia 1.8 instead of 1.7 (#174) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 3 years ago

ProbNumDiffEq.jl - v0.8.1

ProbNumDiffEq v0.8.1

Diff since v0.8.0

Merged pull requests: - Add benchmark to the documentation by embedding an iframe (#164) (@nathanaelbosch) - Add Aqua.jl to the tests (#165) (@nathanaelbosch) - Add Aqua.jl to the tests (#166) (@nathanaelbosch) - Simplify appxtrue a lot by just calling it on the mean (#167) (@nathanaelbosch) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#168) (@github-actions[bot]) - Format all markdown files with JuliaFormatter.jl (#169) (@nathanaelbosch) - Add more MeanProbODESolution constructors to fix the appxtrue error (#170) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 3 years ago

ProbNumDiffEq.jl - v0.8.0

ProbNumDiffEq v0.8.0

Diff since v0.7.2

Merged pull requests: - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#156) (@github-actions[bot]) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#157) (@github-actions[bot]) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#158) (@github-actions[bot]) - Fix typo in docs (#159) (@pitmonticone) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#160) (@github-actions[bot]) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#161) (@github-actions[bot]) - Simplify the code a bit (#162) (@nathanaelbosch) - Link to nbviewer to view benchmarks (#163) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 3 years ago

ProbNumDiffEq.jl - v0.7.2

ProbNumDiffEq v0.7.2

Diff since v0.7.1

Merged pull requests: - One-liner to save some compute on the PI construction (#150) (@nathanaelbosch) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#151) (@github-actions[bot]) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#152) (@github-actions[bot]) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#153) (@github-actions[bot]) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#154) (@github-actions[bot]) - Fix broken links in README and docs (#155) (@pitmonticone)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 3 years ago

ProbNumDiffEq.jl - v0.7.1

ProbNumDiffEq v0.7.1

Diff since v0.7.0

Closed issues: - Use PSDMatrices.jl instead of the small SquarerootMatrix implementation in ./src/squarerootmatrix.jl (#120) - Make the benchmark plots visible again (#123)

Merged pull requests: - Remove Tullio.jl (#149) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.7.0

ProbNumDiffEq v0.7.0

Diff since v0.6.5

Merged pull requests: - Minimal working example with PSDMatrices.jl (#139) (@nathanaelbosch) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#143) (@github-actions[bot]) - Add Octavian again (#144) (@nathanaelbosch) - Slightly improve smooth! to reduce allocations (#145) (@nathanaelbosch) - CompatHelper: add new compat entry for Octavian at version 0.3, (keep existing compat) (#146) (@github-actions[bot]) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#147) (@github-actions[bot]) - CompatHelper: bump compat for TaylorIntegration to 0.9, (keep existing compat) (#148) (@github-actions[bot])

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.6.5

ProbNumDiffEq v0.6.5

Diff since v0.6.4

Merged pull requests: - Make the EK0 cache type stable (#138) (@nathanaelbosch) - Fix links to SciML docs (#140) (@ErikQQY) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#141) (@github-actions[bot]) - Save filtering distributions, even if smooth=false (#142) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.6.4

ProbNumDiffEq v0.6.4

Diff since v0.6.3

Closed issues: - Make ClassicSolverInit work with SecondOrderODEProblems (#132)

Merged pull requests: - Make ClassicSolverInit work with SecondOrderODEProblems (#137) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.6.3

ProbNumDiffEq v0.6.3

Diff since v0.6.2

Merged pull requests: - Make the ManifoldUpdate much more efficient (#134) (@nathanaelbosch) - Remove the StaticArrays dependency since we're not using them (#135) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.6.2

ProbNumDiffEq v0.6.2

Diff since v0.6.1

Closed issues: - Make the solvers compatible with general DynamicalODEProblems (#125)

Merged pull requests: - Add a tutorial for second-order ODEs and energy preservation (#131) (@nathanaelbosch) - Remove the warning on DynamicalODEProblems and instead raise an error if it's not a SecondOrderODEProblem (#133) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.6.1

ProbNumDiffEq v0.6.1

Diff since v0.6.0

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.6.0

ProbNumDiffEq v0.6.0

Diff since v0.5.8

Closed issues: - Bump the OrdinaryDiffEq.jl compat to v6 (#124)

Merged pull requests: - Make ProbNumDiffEq compatible with OrdinaryDiffEq 5.71-6.6 (#129) (@nathanaelbosch) - Make package compatible with OrdinaryDiffEq v6.6 and v6.7 (#130) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.5.8

ProbNumDiffEq v0.5.8

Diff since v0.5.7

Merged pull requests: - Improve the solver documentation (#117) (@nathanaelbosch) - Add documentation for the filtering and smoothing internals (#118) (@nathanaelbosch) - Update a bunch of docstrings (#119) (@nathanaelbosch) - Make tests faster efficient to run (#127) (@nathanaelbosch) - Bump OrdinaryDiffEq.jl compat to 5.70 (#128) (@nathanaelbosch)

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Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.5.7

ProbNumDiffEq v0.5.7

Diff since v0.5.6

Merged pull requests: - Improve the Documentation (#111) (@nathanaelbosch) - CompatHelper: bump compat for TaylorSeries to 0.12, (keep existing compat) (#114) (@github-actions[bot]) - Add a DAE tutorial (#115) (@nathanaelbosch) - Improve precompilation times (#116) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.5.6

ProbNumDiffEq v0.5.6

Diff since v0.5.5

Merged pull requests: - Check that nf is correct for SecondOrderODEProblems (#109) (@nathanaelbosch) - Fix the documentation github action (#112) (@nathanaelbosch) - Remove the prior field from the ODE filter algorithms (#113) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 4 years ago

ProbNumDiffEq.jl - v0.5.5

ProbNumDiffEq v0.5.5

Diff since v0.5.4

Merged pull requests: - Simplify the handling of OOP problems (#108) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 4 years ago

ProbNumDiffEq.jl - v0.5.4

ProbNumDiffEq v0.5.4

Diff since v0.5.3

Merged pull requests: - Minor revisions (#107) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 4 years ago

ProbNumDiffEq.jl - v0.5.3

ProbNumDiffEq v0.5.3

Diff since v0.5.2

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 4 years ago

ProbNumDiffEq.jl - v0.5.2

ProbNumDiffEq v0.5.2

Diff since v0.5.1

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 4 years ago

ProbNumDiffEq.jl - v0.5.1

ProbNumDiffEq v0.5.1

Diff since v0.5.0

Merged pull requests: - Test both 1.6 and 1.7; Specify 1.6 and 1.7 in the Project.toml (#98) (@nathanaelbosch) - CompatHelper: bump compat for OrdinaryDiffEq to 6, (keep existing compat) (#99) (@github-actions[bot]) - CompatHelper: bump compat for ModelingToolkit to 8, (keep existing compat) (#100) (@github-actions[bot]) - Add a standardtag function to fix errors (#101) (@nathanaelbosch) - Improve type stability (#102) (@nathanaelbosch)

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Published by github-actions[bot] about 4 years ago

ProbNumDiffEq.jl - v0.5.0

ProbNumDiffEq v0.5.0

Diff since v0.4.2

Merged pull requests: - CompatHelper: bump compat for ModelingToolkit to 7, (keep existing compat) (#93) (@github-actions[bot]) - Correctly apply the fixed diffusion to the output distribution (#94) (@nathanaelbosch) - New diffusionmodel features and refactoring (#95) (@nathanaelbosch) - General refactoring and documentation (#96) (@nathanaelbosch) - Improve the FixedMVDiffusion model (#97) (@nathanaelbosch)

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.4.2

ProbNumDiffEq v0.4.2

Diff since v0.4.1

Merged pull requests: - destats.nf test (#92) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.4.1

ProbNumDiffEq v0.4.1

Diff since v0.4.0

Merged pull requests: - More flexible Runge-Kutta initialization (#87) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.4.0

ProbNumDiffEq v0.4.0

Diff since v0.3.2

Merged pull requests: - Code coverage improvements (#81) (@nathanaelbosch) - More efficient second-order ODEs (#82) (@nathanaelbosch) - Better counting of nf; Test to be added later (#83) (@nathanaelbosch) - Improve callback code structure (#84) (@nathanaelbosch) - Create .gitattributes to fix GitHub Languages (#85) (@storopoli) - feat: improve clarity of intro sentence in Readme (#86) (@corneliusroemer) - Adjust the Octavian.jl part a bit to reduce the compilation times (#88) (@nathanaelbosch) - Building on OrdinaryDiffEq to compute Jacobians (#89) (@nathanaelbosch) - Relax the measurement-type in update (#90) (@nathanaelbosch)

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.3.2

ProbNumDiffEq v0.3.2

Diff since v0.3.1

Merged pull requests: - New algorithm: EK1 with additional updates on second derivative information (#80) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.3.1

ProbNumDiffEq v0.3.1

Diff since v0.3.0

Merged pull requests: - ManifoldUpdate callback (#79) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.3.0

ProbNumDiffEq v0.3.0

Diff since v0.2.4

Merged pull requests: - Add a test - and fix - for a 2ndorderODE fixed-diffusion bug (#74) (@nathanaelbosch) - Update the benchmark (#75) (@nathanaelbosch) - Restructure the SecondOrderODE tests (#76) (@nathanaelbosch) - Refactor the filtering functions a bit (#77) (@nathanaelbosch) - Add mass-matrix functionality to the solvers (#78) (@nathanaelbosch)

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.2.4

ProbNumDiffEq v0.2.4

Diff since v0.2.3

Merged pull requests: - Add compatibility to DiffEqDevTools.jl (#73) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.2.3

ProbNumDiffEq v0.2.3

Diff since v0.2.2

Merged pull requests: - Format the whole codebase with JuliaFormatter.jl (#71) (@nathanaelbosch) - Improve the TaylorMode Initialization for SecondOrderODEProblems (#72) (@nathanaelbosch)

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.2.2

ProbNumDiffEq v0.2.2

Diff since v0.2.1

Merged pull requests: - More code optimization, with a big focus on the smoothing (#70) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.2.1

ProbNumDiffEq v0.2.1

Diff since v0.2.0

Merged pull requests: - Make the precompilation a tiny bit nicer (precompile when using) (#69) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.2.0

ProbNumDiffEq v0.2.0

Diff since v0.1.9

Merged pull requests: - More efficient initialization via TaylorIntegration.jl (#66) (@nathanaelbosch) - New ordering of the states; New minor version! (#67) (@nathanaelbosch) - Small optimizations throughouth the codebase (#68) (@nathanaelbosch)

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.1.9

ProbNumDiffEq v0.1.9

Diff since v0.1.8

Merged pull requests: - Support for OOP SecondOrderODEProblems (#54) (@nathanaelbosch) - Better, more thorough convergence tests (#55) (@nathanaelbosch) - Matrix-valued problems should work now (#56) (@nathanaelbosch) - Support for scalar-valued ODE problems (#57) (@nathanaelbosch) - Bugfix matrix-valued ODEs and remove support for scalar problems again (#58) (@nathanaelbosch) - Only perform an update step if the step has not been rejected! (#59) (@nathanaelbosch) - Renamed and restructured "measure!", to compute S separately (#60) (@nathanaelbosch) - No more preconditioning in the forward-pass of the solver! (#61) (@nathanaelbosch) - Only use Octavian.jl's matmul for non-abstract arrays (#62) (@nathanaelbosch) - Made a first benchmark to compare ProbNumDiffEq.jl to various other solver packages (#63) (@nathanaelbosch) - Initialization via non-probabilistic solvers (#64) (@nathanaelbosch)

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.1.8

ProbNumDiffEq v0.1.8

Diff since v0.1.7

Merged pull requests: - CompatHelper: bump compat for "ModelingToolkit" to "6" (#46) (@github-actions[bot]) - Better smoothing stability (#52) (@nathanaelbosch) - Better preconditioning (#53) (@nathanaelbosch)

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.1.7

ProbNumDiffEq v0.1.7

Diff since v0.1.6

Merged pull requests: - The smoothing should go until the first index (#43) (@nathanaelbosch) - Improvements to the README and documentation (#44) (@nathanaelbosch) - Better error/warning message for dense!=alg.smooth (#45) (@nathanaelbosch) - Simple change that removes the use of Taylor for q=1 initialization (#47) (@nathanaelbosch) - Reduce memory allocations (#48) (@nathanaelbosch) - Speed up the solvers with Octavian.jl (#49) (@nathanaelbosch) - CompatHelper: add new compat entry for "Octavian" at version "0.3" (#50) (@github-actions[bot]) - CompatHelper: add new compat entry for "Tullio" at version "0.3" (#51) (@github-actions[bot])

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.1.6

ProbNumDiffEq v0.1.6

Diff since v0.1.5

Merged pull requests: - CompatHelper: bump compat for "StructArrays" to "0.6" (#37) (@github-actions[bot]) - Add SecondOrderODEProblem support (only IIP for the time being) (#40) (@nathanaelbosch) - Added tests for automatic differentiation (#41) (@nathanaelbosch) - Fix an issue with the default GR build in the documentation (#42) (@nathanaelbosch)

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.1.5

ProbNumDiffEq v0.1.5

Diff since v0.1.4

Merged pull requests: - Remove Julia 1.6 from testing again (#32) (@nathanaelbosch) - Added ForwardDiff.jl as a dependency (#33) (@nathanaelbosch) - CompatHelper: bump compat for "TaylorSeries" to "0.11" (#34) (@github-actions[bot]) - Use the proper Big types in the IBM prior (#35) (@nathanaelbosch) - Made the state-initialization a bit easier (#36) (@nathanaelbosch) - ForwardDiff for jacobian computation (#38) (@nathanaelbosch) - Improved type stability in the projection matrices and in the preconditioner (#39) (@nathanaelbosch)

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Published by github-actions[bot] over 4 years ago

ProbNumDiffEq.jl - v0.1.4

ProbNumDiffEq v0.1.4

Diff since v0.1.3

Closed issues: - Solvers do not model uncertainty (#25)

Merged pull requests: - Testing improvements + small bugfix (#28) (@nathanaelbosch) - Add Julia 1.6 to the tests (#29) (@nathanaelbosch) - Feature: Sample full states from the solution (#30) (@nathanaelbosch) - Changed the fixed-diffusion to use a local diffusion for error-est (#31) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 5 years ago

ProbNumDiffEq.jl - v0.1.3

ProbNumDiffEq v0.1.3

Diff since v0.1.2

Merged pull requests: - Remove SciMLBase.jl again to fix more dependency issues (#26) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 5 years ago

ProbNumDiffEq.jl - v0.1.2

ProbNumDiffEq v0.1.2

Diff since v0.1.1

Closed issues: - Add to DiffEqDocs? (#12)

Merged pull requests: - Fix coverage issues (#24) (@nathanaelbosch)

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] almost 5 years ago

ProbNumDiffEq.jl - v0.1.1

ProbNumDiffEq v0.1.1

Diff since v0.1.0

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] about 5 years ago

ProbNumDiffEq.jl - v0.1.0

ProbNumDiffEq v0.1.0

Diff since v0.0.1

Closed issues: - TagBot trigger issue (#2)

Merged pull requests: - Let Q be a PSDMatrix to remove the cholesky decompositions in each step (#6) (@nathanaelbosch) - Expand the CI to add additional Julia versions and OSes (#7) (@nathanaelbosch) - CompatHelper: bump compat for "Reexport" to "1.0" (#13) (@github-actions[bot]) - Improved the performance by splitting up predict! into predictmean! and predictcov! (#14) (@nathanaelbosch) - CompatHelper: add new compat entry for "StaticArrays" at version "1.0" (#15) (@github-actions[bot]) - CompatHelper: bump compat for "StructArrays" to "0.5" (#19) (@github-actions[bot])

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Published by github-actions[bot] about 5 years ago

ProbNumDiffEq.jl - v0.0.1

ODEFilters v0.0.1

Merged pull requests: - CompatHelper: add new compat entry for "TaylorSeries" at version "0.10" (#1) (@github-actions[bot])

Scientific Software - Peer-reviewed - Julia
Published by github-actions[bot] over 5 years ago