Science Score: 18.0%

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Repository

Basic Info
  • Host: GitHub
  • Owner: ikrambashir
  • License: gpl-3.0
  • Language: HTML
  • Default Branch: main
  • Size: 210 MB
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  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
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Created over 4 years ago · Last pushed about 4 years ago
Metadata Files
Readme License Citation

README.md

FIT678-Genetic-analysis_IB22

Owner

  • Name: Ikram Bashir
  • Login: ikrambashir
  • Kind: user
  • Location: Pelotas, RS, Brazil
  • Company: @Embrapa Clima Temperado

Citation (citations.bib)

@article{1,
  title={Multiple interval mapping for quantitative trait loci},
  author={Kao, Chen-Hung and Zeng, Zhao-Bang and Teasdale, Robert D},
  journal={Genetics},
  volume={152},
  number={3},
  pages={1203--1216},
  year={1999},
  publisher={Oxford University Press}
}
@article{2,
  title={Mapping mendelian factors underlying quantitative traits using RFLP linkage maps.},
  author={Lander, Eric S and Botstein, David},
  journal={Genetics},
  volume={121},
  number={1},
  pages={185--199},
  year={1989},
  publisher={Oxford University Press}
}
@article{3,
  title={Quantitative trait loci analysis of plant height and ear height in maize (Zea mays L.)},
  author={Zhang, ZM and Zhao, MJ and Ding, HP and Rong, TZ and Pan, GT},
  journal={Russian Journal of Genetics},
  volume={42},
  number={3},
  pages={306--310},
  year={2006},
  publisher={Springer}
}
@article{4,
  title={Precision mapping of quantitative trait loci.},
  author={Zeng, Zhao-Bang},
  journal={Genetics},
  volume={136},
  number={4},
  pages={1457--1468},
  year={1994},
  publisher={Oxford University Press}
}
@article{5,
  title={Empirical threshold values for quantitative trait mapping.},
  author={Churchill, Gary A and Doerge, RW1206241},
  journal={Genetics},
  volume={138},
  number={3},
  pages={963--971},
  year={1994},
  publisher={Oxford University Press}
}
@article{6,
  title={Permutation tests for multiple loci affecting a quantitative character},
  author={Doerge, Rebecca W and Churchill, GA1206957},
  journal={Genetics},
  volume={142},
  number={1},
  pages={285--294},
  year={1996},
  publisher={Oxford University Press}
}
@article{7,
  title={Significance thresholds for QTL interval mapping tests},
  author={Doerge, RW and Reba{\"\i}, Ahmed},
  journal={Heredity},
  volume={76},
  number={5},
  pages={459--464},
  year={1996},
  publisher={Nature Publishing Group}
}
@article{8,
  title={Construction of a genetic map and location of quantitative trait loci for dwarf trait in maize by RFLP markers},
  author={Cao, Yongguo and Wang, Guoying and Wang, Shoucai and Wei, Yanling and Lu, Jiang and Xie, Youju and Dai, Jingrui},
  journal={Chinese Science Bulletin},
  volume={45},
  number={3},
  pages={247--250},
  year={2000},
  publisher={Springer}
}
@article{9,
  title={Gene list and working maps.},
  author={Coe, EH and Hoisington, D and Chao, S and others},
  journal={Maize Genetics Cooperation News Letter},
  number={64},
  pages={134--163},
  year={1990}
}
@Article{10,
    title = {R/qtl: {QTL} mapping in experimental crosses},
    author = {Karl W. Broman and Hao Wu and Śaunak Sen and Gary A. Churchill},
    journal = {Bioinformatics},
    year = {2003},
    volume = {19},
    pages = {889-890},
    doi = {10.1093/bioinformatics/btg112},
    url = {https://doi.org/10.1093/bioinformatics/btg112},
    eprint = {https://academic.oup.com/bioinformatics/article-pdf/19/7/889/499910/btg112.pdf},
  }
   @Manual{11,
    title = {RStudio: Integrated Development Environment for R},
    author = {{RStudio Team}},
    organization = {RStudio, PBC},
    address = {Boston, MA},
    year = {2022},
    url = {http://www.rstudio.com/},
  }
  @article{23,
  title={Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers.},
  author={Stuber, Charles W and Lincoln, Stephen E and Wolff, DW and Helentjaris, T and Lander, ES1205218},
  journal={Genetics},
  volume={132},
  number={3},
  pages={823--839},
  year={1992},
  publisher={Oxford University Press}
}
@article{24,
  title={Quantitative trait locus (QTL) mapping using different testers and independent population samples in maize reveals low power of QTL detection and large bias in estimates of QTL effects},
  author={Melchinger, Albrecht E and Utz, H Friedrich and Sch{\"o}n, Chris C},
  journal={Genetics},
  volume={149},
  number={1},
  pages={383--403},
  year={1998},
  publisher={Oxford University Press}
}
@article{25,
  title={Isoenzymatic identification of quantitative trait loci in crosses of elite maize inbreds},
  author={Abler, BSB and Edwards, MD and Stuber, CW},
  journal={Crop Science},
  volume={31},
  number={2},
  pages={267--274},
  year={1991},
  publisher={Wiley Online Library}
}
@article{26,
  title={Molecular marker-facilitated studies in an elite maize population: I. Linkage analysis and determination of QTL for morphological traits},
  author={Veldboom, LR and Lee, M and Woodman, WL},
  journal={Theoretical and Applied Genetics},
  volume={88},
  number={1},
  pages={7--16},
  year={1994},
  publisher={Springer}
}

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