Science Score: 67.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 5 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Committers with academic emails
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (16.4%) to scientific vocabulary
Keywords
Repository
GUI for configuring the SOSAA model
Basic Info
- Host: GitHub
- Owner: juntyr
- License: other
- Language: Python
- Default Branch: main
- Homepage: https://www.helsinki.fi/en/researchgroups/multi-scale-modelling/sosaa
- Size: 577 KB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 1
Topics
Metadata Files
README.md
SOSAA GUI 
The SOSAA model is a chemistry transport model that has been actively developed in the Multi-Scale Modelling Group at the University of Helsinki since 2011 [^1].
The SOSAA GUI provides a graphical user interface to configure, compile, run, and explore the SOSAA model. In particular, it allows the user to load, edit, and save INITFILEs for the model. The GUI is fully independent of SOSAA and can thus be run on a separate machine if needed. However, if SOSAA is installed on the same machine, the GUI can also be used to compile and run the model.
The GUI also provides access to the SOSAA Response Surface Model (RSM), which can be used to approximate the SOSAA model using machine learning. Note, however, that the SOSAA RSM, which is evaluated in Juniper Tyree's Masters Thesis on "Prudent Response Surface Models", should currently only be used to experiment with and improve the RSM itself.
Installation
pip
The SOSAA GUI is available on the Python Package Index (PyPI) and can be installed using
bash
pip install sosaa-gui
This command can also be run inside a conda environment to install the SOSAA GUI with conda.
From Source
First, clone the git repository using
bash
git clone https://github.com/juntyr/sosaa-gui.git
or
bash
git clone git@github.com:juntyr/sosaa-gui.git
Next, enter the repository folder and use pip to install the program:
bash
cd sosaa-gui && pip install .
Finally, you can launch the GUI using
bash
sosaa-gui
SOSAA Model Availability
Unfortunately, the SOSAA model is not yet publicly available. However, access to the complete SOSAA source code is provided upon request -- please contact Michael Boy (michael.boy@helsinki.fi), Putian Zhou (putian.zhou@helsinki.fi), or Petri Clusius (petri.clusius@helsinki.fi) for more information.
Usage Notes
If you experience problems with the UI scaling, try launching the GUI as follows:
bash
QT_SCREEN_SCALE_FACTORS="1.17;1.17" sosaa-gui
Note that you will need xterm, uxterm, rxvt, or urxvt installed on your system and in your path if you want to compile or run SOSAA from within the SOSAA GUI.
License
Licensed under the GPL-3.0 license (LICENSE-GPL or https://www.gnu.org/licenses/gpl-3.0.html).
Citation
Please refer to the CITATION.cff file and refer to https://citation-file-format.github.io to extract the citation in a format of your choice.
The SOSAA GUI was created as part of Juniper Tyree's Masters Thesis "Prudent Response Surface Models" for the M.Sc. Theoretical and Computational Methods programme at the University of Helsinki.
[^1]: M. Boy et al. SOSA – a new model to simulate the concentrations of organic vapours and sulphuric acid inside the ABL – Part 1: Model description and initial evaluation. Atmospheric Chemistry and Physics. 2011;11 (1): 43–51. Available from: doi:10.5194/acp-11-43-2011.
Owner
- Name: Juniper Tyree
- Login: juntyr
- Kind: user
- Location: Helsinki
- Company: University of Helsinki
- Repositories: 87
- Profile: https://github.com/juntyr
PhD researcher at UH with a passion for the environment and Rust. Graduate of MEng Computing at ICL and MSc Theoretical & Computational Methods at UH.
Citation (CITATION.cff)
# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!
cff-version: 1.2.0
title: SOSAA GUI
message: >-
If you use this software, please cite it using the
metadata from this file.
type: software
authors:
- given-names: Juniper
family-names: Tyree
affiliation: University of Helsinki
email: juniper.tyree@helsinki.fi
orcid: 'https://orcid.org/0000-0002-7923-9609'
- given-names: Petri
family-names: Clusius
email: petri.clusius@helsinki.fi
affiliation: University of Helsinki
orcid: 'https://orcid.org/0000-0003-3121-0775'
identifiers:
- type: doi
value: 10.5281/zenodo.7868439
description: The Zenodo release
- type: url
value: >-
https://github.com/juntyr/sosaa-gui/releases/tag/0.1.0
description: The GitHub release
- type: url
value: 'https://pypi.org/project/sosaa-gui/0.1.0/'
description: The PyPi release
repository-code: 'https://github.com/juntyr/sosaa-gui'
abstract: >-
The SOSAA GUI provides a graphical user interface to
configure, compile, run, and explore the SOSAA model.
keywords:
- sosaa
- gui
- config
license: GPL-3.0
commit: msc-tcm
version: 0.1.0
date-released: '2023-04-26'
GitHub Events
Total
Last Year
Committers
Last synced: 7 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Juniper Tyree | j****e@h****i | 106 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 0
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0