bulk-rna-seq-pipeline
Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
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✓codemeta.json file
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✓.zenodo.json file
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○DOI references
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○Academic publication links
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○Scientific vocabulary similarity
Low similarity (0.6%) to scientific vocabulary
Last synced: 7 months ago
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JSON representation
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Repository
Basic Info
- Host: GitHub
- Owner: htan-pipelines
- Language: WDL
- Default Branch: master
- Size: 247 KB
Statistics
- Stars: 1
- Watchers: 0
- Forks: 4
- Open Issues: 0
- Releases: 0
Created over 5 years ago
· Last pushed 10 months ago
Metadata Files
Readme
Citation
README.md
bulk-rna-seq-pipeline
Files adapted from GATK and Broad Institute pipelines. Final pipeline is a merger between GTeX RNA-seq, GATK Germline variant calling, and customized WDL tasks.
Owner
- Name: htan-pipelines
- Login: htan-pipelines
- Kind: organization
- Repositories: 1
- Profile: https://github.com/htan-pipelines
Citation (CITATION.cff)
# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!
cff-version: 1.2.0
title: htan-pipelines/bulk-rna-seq-pipeline
message: >-
If you use this software, please cite it using the
metadata from this file.
type: software
authors:
- given-names: Chris
family-names: Husted
email: chusted@bu.edu
- given-names: 'William '
family-names: Mischler
- family-names: 'Venkatraman '
given-names: Divya
email: dvenkat@bu.edu
- given-names: Yohana
family-names: Kefella
email: ykefella@bu.edu
url: 'https://github.com/htan-pipelines/bulk-rna-seq-pipeline'
abstract: Bulk RNA-seq pipeline based on the GTEx RNA-seq pipeline.
version: '20'
date-released: '2024-01-17'
GitHub Events
Total
- Push event: 27
Last Year
- Push event: 27