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rnaseq-wf

https://github.com/amalthomas14/rnaseq-wf

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic links in README
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Unable to calculate vocabulary similarity
Last synced: 10 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: amalthomas14
  • License: mit
  • Language: Nextflow
  • Default Branch: main
  • Size: 5.53 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 2
Created about 2 years ago · Last pushed about 2 years ago
Metadata Files
Readme Changelog License Code of conduct Citation

Owner

  • Name: Amal Thomas
  • Login: amalthomas14
  • Kind: user

Computational Biologist

GitHub Events

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Last Year

Dependencies

modules/nf-core/bbmap/bbsplit/meta.yml cpan
modules/nf-core/cat/fastq/meta.yml cpan
modules/nf-core/custom/dumpsoftwareversions/meta.yml cpan
modules/nf-core/custom/getchromsizes/meta.yml cpan
modules/nf-core/fastp/meta.yml cpan
modules/nf-core/fastqc/meta.yml cpan
modules/nf-core/fq/subsample/meta.yml cpan
modules/nf-core/gffread/meta.yml cpan
modules/nf-core/gunzip/meta.yml cpan
modules/nf-core/hisat2/align/meta.yml cpan
modules/nf-core/hisat2/build/meta.yml cpan
modules/nf-core/hisat2/extractsplicesites/meta.yml cpan
modules/nf-core/picard/markduplicates/meta.yml cpan
modules/nf-core/preseq/lcextrap/meta.yml cpan
modules/nf-core/rsem/calculateexpression/meta.yml cpan
modules/nf-core/rsem/preparereference/meta.yml cpan
modules/nf-core/rseqc/bamstat/meta.yml cpan
modules/nf-core/rseqc/inferexperiment/meta.yml cpan
modules/nf-core/rseqc/innerdistance/meta.yml cpan
modules/nf-core/rseqc/junctionannotation/meta.yml cpan
modules/nf-core/rseqc/junctionsaturation/meta.yml cpan
modules/nf-core/rseqc/readdistribution/meta.yml cpan
modules/nf-core/rseqc/readduplication/meta.yml cpan
modules/nf-core/rseqc/tin/meta.yml cpan
modules/nf-core/salmon/index/meta.yml cpan
modules/nf-core/salmon/quant/meta.yml cpan
modules/nf-core/samtools/flagstat/meta.yml cpan
modules/nf-core/samtools/idxstats/meta.yml cpan
modules/nf-core/samtools/index/meta.yml cpan
modules/nf-core/samtools/sort/meta.yml cpan
modules/nf-core/samtools/stats/meta.yml cpan
modules/nf-core/sortmerna/meta.yml cpan
modules/nf-core/star/align/meta.yml cpan
modules/nf-core/star/genomegenerate/meta.yml cpan
modules/nf-core/stringtie/stringtie/meta.yml cpan
modules/nf-core/subread/featurecounts/meta.yml cpan
modules/nf-core/trimgalore/meta.yml cpan
modules/nf-core/ucsc/bedclip/meta.yml cpan
modules/nf-core/ucsc/bedgraphtobigwig/meta.yml cpan
modules/nf-core/umitools/dedup/meta.yml cpan
modules/nf-core/umitools/extract/meta.yml cpan
modules/nf-core/untar/meta.yml cpan
subworkflows/nf-core/bam_dedup_stats_samtools_umitools/meta.yml cpan
subworkflows/nf-core/bam_markduplicates_picard/meta.yml cpan
subworkflows/nf-core/bam_rseqc/meta.yml cpan
subworkflows/nf-core/bam_sort_stats_samtools/meta.yml cpan
subworkflows/nf-core/bam_stats_samtools/meta.yml cpan
subworkflows/nf-core/bedgraph_bedclip_bedgraphtobigwig/meta.yml cpan
subworkflows/nf-core/fastq_align_hisat2/meta.yml cpan
subworkflows/nf-core/fastq_fastqc_umitools_fastp/meta.yml cpan
subworkflows/nf-core/fastq_fastqc_umitools_trimgalore/meta.yml cpan
subworkflows/nf-core/fastq_subsample_fq_salmon/meta.yml cpan
pyproject.toml pypi