bifo
Biological image processing tools named after bifoveate retinas
Science Score: 44.0%
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○Scientific vocabulary similarity
Low similarity (6.8%) to scientific vocabulary
Repository
Biological image processing tools named after bifoveate retinas
Basic Info
- Host: GitHub
- Owner: josh-l-morgan
- License: mit
- Language: Python
- Default Branch: main
- Size: 881 KB
Statistics
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
<<<<<<< HEAD # bifo
**bifo** is a collection of biological image processing modules tangentially related to bifoveate retinas.
*trainTools* Includes miscellaneous tools for training Unets to analyze 3D volumes
*fetchChunkFromMips* creates the class fetchDiced that reads a diced volume directory if images (diced/section_number/mip_level) and delivers 3D image chunks
## Installation
```bash
pip install .
```
## Usage
```python
import bifo.trainTools as tt from bifo.fetchChunckFromMips import fetchDiced
```
## License
This project is licensed under the MIT License — see the [LICENSE](LICENSE) file for details.
## Citation
If you use this package in your research, please cite it as described in CITATION.cff.
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bifo
Package of biological image processing modules named after bifoveate retinas
228390711efd709420f98e4afca4d897966377e3
Owner
- Name: Josh L. Morgan
- Login: josh-l-morgan
- Kind: user
- Repositories: 1
- Profile: https://github.com/josh-l-morgan
Scientist
Citation (CITATION.cff)
cff-version: 1.2.0
message: "If you use this software, please cite it as below."
title: "bifo: biological image processing tools"
authors:
- family-names: Morgan
given-names: Josh L.
email: chilopod@gmail.com
affiliation: "Washington University in St. Louis"
version: "0.1.0"
license: MIT
doi: ""
date-released: 2025-07-13
repository-code: https://github.com/josh-l-morgan/bifo
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