Science Score: 51.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 6 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
19 of 107 committers (17.8%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (6.2%) to scientific vocabulary
Keywords
carpentries-lab
english
lesson
metagenomics
peer-reviewed
r
stable
Keywords from Contributors
carpentries-incubator
alpha
life-sciences
carpentries-lesson
document-creation
latex
carpentries
data-carpentry
beta
ecology
Last synced: 6 months ago
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JSON representation
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Repository
Introduction to R for Metagenomics
Basic Info
- Host: GitHub
- Owner: carpentries-lab
- License: other
- Language: Python
- Default Branch: gh-pages
- Homepage: https://carpentries-lab.github.io/metagenomics-R/
- Size: 9.56 MB
Statistics
- Stars: 3
- Watchers: 4
- Forks: 7
- Open Issues: 0
- Releases: 1
Topics
carpentries-lab
english
lesson
metagenomics
peer-reviewed
r
stable
Created about 5 years ago
· Last pushed almost 2 years ago
Metadata Files
Readme
Contributing
Funding
License
Code of conduct
Citation
README.md
Introduction to R
An introduction to the R for people working with metagenomics data. This lesson is part of the Metagenomics Workshop.
Contribution
Make a suggestion or correct an error by raising an Issue.
Code of Conduct
All participants should agree to abide by the Data Carpentry Code of Conduct.
Maintainer(s)
Current maintainers of this lesson are
Authors
A list of contributors to the lesson can be found in AUTHORS
Citation
Please cite as:
Claudia Zirión Martínez; Diego Garfias Gallegos; Tania Vanessa Arellano Fernández; Aarón Espinosa Jaime; Edder D Bustos Díaz; José Abel Lovaco Flores; Luis Gerardo Tejero Gómez; J Abraham Avelar Rivas; Nelly Sélem (March , 2023) A Data Carpentry- Style Metagenomics Workshop
Owner
- Name: The Carpentries Lab
- Login: carpentries-lab
- Kind: organization
- Repositories: 3
- Profile: https://github.com/carpentries-lab
Citation (CITATION)
Please cite as: Nelly Sélem Mojica; Diego Garfias Gallegos; Claudia Zirión Martínez; Jesús Abraham Avelar Rivas; Aaron Jaime Espinosa; Abel Lovaco Flores; Tania Vanessa Arellano Fernandez (2022, Jan). Metagenomics for Software Carpentry lesson, Jan 2022. Zenodo. https://doi.org/10.5281/zenodo.4285900
GitHub Events
Total
- Fork event: 2
Last Year
- Fork event: 2
Committers
Last synced: about 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Greg Wilson | g****n@s****g | 439 |
| Raniere Silva | r****e@r****m | 197 |
| François Michonneau | f****u@g****m | 148 |
| Maxim Belkin | m****n@g****m | 108 |
| Nelly Sélem | n****5@h****m | 51 |
| Claudia Zirión Martínez | 7****n | 33 |
| Abigail Cabunoc Mayes | a****c@g****m | 25 |
| Andy Boughton | a****t@g****m | 23 |
| Katrin Leinweber | 9****r | 22 |
| Erin Becker | e****r@g****m | 21 |
| Rémi Emonet | r****i@h****m | 21 |
| W. Trevor King | w****g@t****s | 20 |
| Aaron O'Leary | a****y@g****m | 14 |
| Toby Hodges | t****s@g****m | 13 |
| maneesha sane | m****e@g****m | 10 |
| Joao Rodrigues | j****s@g****m | 10 |
| Diego Garfias Gallegos | 6****e | 9 |
| Rayna M Harris | r****s | 9 |
| Chris Erdmann | c****s@c****g | 9 |
| Andy Boughton | p****t@g****m | 8 |
| Joseph Stachelek | j****a | 6 |
| Jonah Duckles | j****h@d****g | 6 |
| aaronejaime | 4****e | 5 |
| AbrahamAvelar | j****r@g****m | 5 |
| James Allen | j****s@s****m | 5 |
| Piotr Banaszkiewicz | p****r@b****g | 5 |
| John Blischak | j****k@g****m | 5 |
| raynamharris | r****s@u****u | 4 |
| Zhian N. Kamvar | z****r@g****m | 4 |
| maneesha sane | a****m@g****m | 4 |
| and 77 more... | ||
Committer Domains (Top 20 + Academic)
idyll.org: 2
manchester.ac.uk: 2
uni-konstanz.de: 1
berkeley.edu: 1
email.arizona.edu: 1
asu.edu: 1
alum.mit.edu: 1
fz-juelich.de: 1
utexas.edu: 1
banaszkiewicz.org: 1
sharelatex.com: 1
duckles.org: 1
carpentries.org: 1
tremily.us: 1
heeere.com: 1
rgaiacs.com: 1
software-carpentry.org: 1
davidjb.com: 1
brown.edu: 1
ucdavis.edu: 1
nist.gov: 1
st-andrews.ac.uk: 1
software.ac.uk: 1
ucr.edu: 1
dundee.ac.uk: 1
llnl.gov: 1
imperial.ac.uk: 1
utoronto.ca: 1
Issues and Pull Requests
Last synced: about 2 years ago
All Time
- Total issues: 0
- Total pull requests: 41
- Average time to close issues: N/A
- Average time to close pull requests: 8 days
- Total issue authors: 0
- Total pull request authors: 7
- Average comments per issue: 0
- Average comments per pull request: 0.02
- Merged pull requests: 41
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 6
- Average time to close issues: N/A
- Average time to close pull requests: about 18 hours
- Issue authors: 0
- Pull request authors: 2
- Average comments per issue: 0
- Average comments per pull request: 0.0
- Merged pull requests: 6
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- tobyhodges (1)
Pull Request Authors
- Czirion (15)
- Bedxxe (9)
- AbrahamAvelar (5)
- aaronejaime (5)
- tobyhodges (3)
- fabel134 (2)
- zkamvar (1)
Top Labels
Issue Labels
Pull Request Labels
Dependencies
requirements.txt
pypi
- PyYAML *
- update-copyright *
Gemfile
rubygems
- github-pages >= 0 development
.github/workflows/template.yml
actions
- actions/cache v1 composite
- actions/checkout master composite
- actions/setup-python v2 composite
- actions/setup-ruby v1 composite
- r-lib/actions/setup-r v2 composite
.github/workflows/website.yml
actions
- actions/cache v1 composite
- actions/checkout master composite
- actions/setup-python v2 composite
- actions/setup-ruby v1 composite
- r-lib/actions/setup-r v2 composite