Recent Releases of best-of-atomistic-machine-learning
best-of-atomistic-machine-learning - Update: 2025.04.09-13.10
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Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- CHGNet (🥈19 · ⭐ 290 · 📉) - Pretrained universal neural network potential for charge-informed atomistic modeling https://chgnet.lbl.gov.
CustomML-IAPMDpretrainedelectrostaticsmagnetismstructure-relaxation - Scikit-Matter (🥉15 · ⭐ 81 · 📉) - A collection of scikit-learn compatible utilities that implement methods born out of the materials science and..
BSD-3scikit-learn
Published by github-actions[bot] about 1 year ago
best-of-atomistic-machine-learning - Update: 2025.04.09
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Projects that have a higher project-quality score compared to the last update. There might be a variety of reasons, such as increased downloads or code activity.
- KLIFF (🥈18 · ⭐ 35 · 📈) - KIM-based Learning-Integrated Fitting Framework for interatomic potentials.
LGPL-2.1probabilisticworkflows - ChemCrow (🥈16 · ⭐ 730 · 📈) - Open source package for the accurate solution of reasoning-intensive chemical tasks.
MITai-agent - TorchSim (🥈16 · ⭐ 170 · 🐣) - Torch-native, batchable, atomistic simulation.
MITHTCUIPML-IAPstructure-optimization - hippynn (🥈13 · ⭐ 76 · 📈) - python library for atomistic machine learning.
Customworkflows - dftio (🥈8 · ⭐ 8 · 📈) - dftio is to assist machine learning communities to transcript DFT output into a format that is easy to read or used by..
LGPL-3.0data-structuresworkflows
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Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- MODNet (🥇16 · ⭐ 91 · 📉) - MODNet: a framework for machine learning materials properties.
MITpretrainedsmall-datatransfer-learning
➕ Added Projects
Projects that were recently added to this best-of list.
- Garden (🥇20 · ⭐ 26 · ➕) - FAIR AI/ML Model Publishing Framework.
MITmodel-repository - cuEquivariance (🥇19 · ⭐ 210 · 🐣) - cuEquivariance is a math library that is a collective of low-level primitives and tensor ops to accelerate widely-used..
Apache-2rep-learn - Introduction to AI-driven Science on Supercomputers: A Student Training Series (🥈11 · ⭐ 220 · ➕) -
Unlicensedgeneral-mlrep-learnlanguage-models - OpenEquivariance (🥉10 · ⭐ 47 · ➕) - OpenEquivariance: a fast, open-source GPU JIT kernel generator for the Clebsch-Gordon Tensor Product.
BSD-3rep-learn
Published by github-actions[bot] about 1 year ago
best-of-atomistic-machine-learning - Update: 2025.04.08
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Projects that have a higher project-quality score compared to the last update. There might be a variety of reasons, such as increased downloads or code activity.
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Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- M3GNet (🥉18 · ⭐ 280 · 📉) - Materials graph network with 3-body interactions featuring a DFT surrogate crystal relaxer and a state-of-the-art..
BSD-3ML-IAPpretrained - HamGNN (🥈7 · ⭐ 91 · 📉) - An E(3) equivariant Graph Neural Network for predicting electronic Hamiltonian matrix.
GPL-3.0rep-learnmagnetismC-lang
➕ Added Projects
Projects that were recently added to this best-of list.
- DeePTB (🥇15 · ⭐ 71 · ➕) - DeePTB: A deep learning package for tight-binding approach with ab initio accuracy.
LGPL-3.0ML-DFT - DP-GEN2 (🥈14 · ⭐ 38 · ➕) - 2nd generation of the Deep Potential GENerator.
LGPL-3.0ML-IAPMDworkflows - DeepModeling Projects (🥈10 · ⭐ 6 · ➕) - DeepModeling projects.
CC-BY-4.0 - DeepMD-GNN (🥉9 · ⭐ 39 · ➕) - DeePMD-kit plugin for various graph neural network models.
LGPL-3.0rep-learnMDUIPC++ - DeepModeling Tutorials (🥉7 · ⭐ 15 · ➕) - Tutorials for DeepModeling projects.
Unlicensed - dftio (🥉6 · ⭐ 8 · ➕) - dftio is to assist machine learning communities to transcript DFT output into a format that is easy to read or used by..
LGPL-3.0data-structuresworkflows
Published by github-actions[bot] about 1 year ago
best-of-atomistic-machine-learning - Update: 2025.04.07-07.33
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Projects that have a higher project-quality score compared to the last update. There might be a variety of reasons, such as increased downloads or code activity.
- TorchSim (🥉14 · ⭐ 140 · 🐣) - Torch-native, batchable, atomistic simulation.
MITHTCUIPML-IAPstructure-optimization - iam-notebooks (🥈10 · ⭐ 28 · 📈) - Jupyter notebooks for the lectures of the Introduction to Atomistic Modeling.
Apache-2
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Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- Molfeat (🥈19 · ⭐ 200 · 📉) - molfeat - the hub for all your molecular featurizers.
Apache-2cheminformaticsrep-engrep-learngenerativelanguage-modelspretrained - MACE-FOUNDATION models (🥉18 · ⭐ 640 · 📉) - MACE-MP models.
MITML-IAPpretrainedrep-learnMD - SLICES and MatterGPT (🥈14 · ⭐ 100 · 📉) - SLICES: An Invertible, Invariant, and String-based Crystal Representation [2023, Nature Communications] MatterGPT,..
LGPL-2.1rep-englanguage-modelstransformermaterials-discoverystructure-prediction - Graph-Aware-Transformers (🥉5 · ⭐ 56 · 🐣) - Graph-Aware Attention for Adaptive Dynamics in Transformers.
Apache-2transformergraph-datapretrainedsingle-paper
Published by github-actions[bot] about 1 year ago
best-of-atomistic-machine-learning - Update: 2025.04.07
📈 Trending Up
Projects that have a higher project-quality score compared to the last update. There might be a variety of reasons, such as increased downloads or code activity.
- pymatviz (🥇23 · ⭐ 200 · 📈) - A toolkit for visualizations in materials informatics.
MITgeneral-toolprobabilistic - exmol (🥇22 · ⭐ 330 · 📈) - Explainer for black box models that predict molecule properties.
MIT - TorchSim (🥉13 · ⭐ 140 · 🐣) - Torch-native, batchable, atomistic simulation.
MITHTCUIPML-IAPstructure-optimization - DeepErwin (🥉9 · ⭐ 54 · 📈) - DeepErwin is a python 3.8+ package that implements and optimizes JAX 2.x wave function models for numerical solutions..
Custom
📉 Trending Down
Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- FLARE (🥇18 · ⭐ 310 · 📉) - An open-source Python package for creating fast and accurate interatomic potentials.
MITC++ML-IAP - SpheriCart (🥇18 · ⭐ 83 · 📉) - Multi-language library for the calculation of spherical harmonics in Cartesian coordinates.
MIT - gptchem (🥈12 · ⭐ 250 · 💀) - Use GPT-3 to solve chemistry problems.
MIT - PiNN (🥈12 · ⭐ 110 · 📉) - A Python library for building atomic neural networks.
BSD-3 - BenchML (🥉11 · ⭐ 15 · 💀) - ML benchmarking and pipeling framework.
Apache-2benchmarking
➕ Added Projects
Projects that were recently added to this best-of list.
- SMACT (🥇27 · ⭐ 110 · ➕) - Python package to aid materials design and informatics.
MITHTCstructure-predictionelectrostatics - MACE-FOUNDATION models (🥉19 · ⭐ 640 · ➕) - MACE-MP models.
MITML-IAPpretrainedrep-learnMD - AtomAI (🥈19 · ⭐ 210 · 💀) - Deep and Machine Learning for Microscopy.
MITcomputer-visionUSLexperimental-data - ElementEmbeddings (🥈16 · ⭐ 41 · ➕) - Python package to interact with high-dimensional representations of the chemical elements.
MITXAIUSLviz - pySIPFENN (🥈16 · ⭐ 22 · ➕) - Python python toolset for Structure-Informed Property and Feature Engineering with Neural Networks. It offers unique..
LGPL-3.0material-defectDisordered Materialspretrainedtransfer-learning - ChemML (🥈15 · ⭐ 160 · ➕) - ChemML is a machine learning and informatics program suite for the chemical and materials sciences.
BSD-3cheminformaticsactive-learningworkflows - SLICES and MatterGPT (🥇15 · ⭐ 100 · ➕) - SLICES: An Invertible, Invariant, and String-based Crystal Representation [2023, Nature Communications] MatterGPT,..
LGPL-2.1rep-englanguage-modelstransformermaterials-discoverystructure-prediction - xtal2png (🥈14 · ⭐ 37 · 💀) - Encode/decode a crystal structure to/from a grayscale PNG image for direct use with image-based machine learning..
MITcomputer-vision - Bgolearn (🥈13 · ⭐ 91 · ➕) - [Materials & Design 2024] A Bayesian global optimization package for material design Adaptive Learning | Active..
MITmaterials-discoveryprobabilistic - matdiscover (🥈13 · ⭐ 41 · 💤) - A materials discovery algorithm geared towards exploring high-performance candidates in new chemical spaces.
MIT<a href="https://www.psik2022.net/program/symposia#h.phM6hJbQD9dex">materials-discoveryrep-engHTC - Awesome-Scientific-Language-Models (🥈11 · ⭐ 560 · ➕) - A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discovery (EMNLP24).
MITlanguage-modelsgeneral-mlpretrainedmultimodal - nablaDFT (🥈11 · ⭐ 200 · ➕) - nablaDFT: Large-Scale Conformational Energy and Hamiltonian Prediction benchmark and dataset.
MITML-DFTML-WFTdrug-discoveryML-IAPbenchmarking - PDynA (🥉11 · ⭐ 41 · ➕) - Python package to analyse the structural dynamics of perovskites.
MITMD - pumml (🥈11 · ⭐ 37 · 💀) - Positive and Unlabeled Materials Machine Learning (pumml) is a code that uses semi-supervised machine learning to..
MITmaterials-discovery - MPDS API (🥈11 · ⭐ 27 · ➕) - Tutorials, notebooks, issue tracker, and website on the MPDS API: the data retrieval interface for the Materials..
CC-BY-4.0community-resourceliterature-data - MLforMaterials (🥉7 · ⭐ 79 · ➕) - Online resource for a practical course in machine learning for materials research at Imperial College London..
MITcommunity-resourcegeneral-mlrep-engmaterials-discovery - molecular-vae (🥉7 · ⭐ 65 · 💀) - Pytorch implementation of the paper Automatic Chemical Design Using a Data-Driven Continuous Representation of..
MITrep-learncheminformaticssingle-paper - PolyGNN (🥉7 · ⭐ 38 · ➕) - polyGNN is a Python library to automate ML model training for polymer informatics.
MITsoft-mattermultitasksingle-paper - BPNET (🥉7 · ⭐ 2 · 🐣) - Behler-Parrinello type neural networks in Fortran2008.
MITrep-engFortran - Geom3D (🥉6 · ⭐ 120 · 💀) - Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023.
MITbenchmarkingsingle-paper - LLM4Chem (🥉6 · ⭐ 81 · 💤) - Official code repo for the paper LlaSMol: Advancing Large Language Models for Chemistry with a Large-Scale,..
MITcheminformaticsdatasets - Graph-Aware-Transformers (🥉6 · ⭐ 56 · 🐣) - Graph-Aware Attention for Adaptive Dynamics in Transformers.
Apache-2transformergraph-datapretrainedsingle-paper - ffonons (🥉6 · ⭐ 18 · ➕) - Phonons from ML force fields.
MITbenchmarkingdensity-of-states - polyVERSE (🥉6 · ⭐ 17 · ➕) - polyVERSE is a comprehensive repository of informatics-ready datasets curated by the Ramprasad Group.
Customsoft-matter - Crystalformer (🥉5 · ⭐ 17 · ➕) - The official code respository for Crystalformer: Infinitely Connected Attention for Periodic Structure Encoding (ICLR..
MITtransformersingle-paper - thermo (🥇5 · ⭐ 16 · 💤) - Data-driven risk-conscious thermoelectric materials discovery.
MITmaterials-discoveryexperimental-dataactive-learningtransport-phenomena - MUSE (🥉5 · ⭐ 4 · ➕) - A python package for fast building amorphous solids and liquid mixtures from @materialsproject computed structures and..
MITML-IAPDisordered Materials - 3D-EMGP (🥉4 · ⭐ 34 · 💤) - [AAAI 2023] The implementation for the paper Energy-Motivated Equivariant Pretraining for 3D Molecular Graphs.
MITpretrainedrep-learnsingle-paper - Crystalframer (🥉4 · ⭐ 5 · 🐣) - The official code respository for Rethinking the role of frames for SE(3)-invariant crystal structure modeling (ICLR..
MITtransformersingle-paper
Published by github-actions[bot] about 1 year ago
best-of-atomistic-machine-learning - Update: 2025.01.02
📈 Trending Up
Projects that have a higher project-quality score compared to the last update. There might be a variety of reasons, such as increased downloads or code activity.
- dgl-lifesci (🥇24 · ⭐ 740 · 💀) - Python package for graph neural networks in chemistry and biology.
Apache-2 - ChemCrow (🥇18 · ⭐ 660 · 📈) - Open source package for the accurate solution of reasoning-intensive chemical tasks.
MITai-agent - GT4SD (🥇18 · ⭐ 340 · 📈) - GT4SD, an open-source library to accelerate hypothesis generation in the scientific discovery process.
MITpretraineddrug-discoveryrep-learn - Orb Models (🥈18 · ⭐ 220 · 🐣) - ORB forcefield models from Orbital Materials.
CustomML-IAPpretrained - Rascaline (🥇16 · ⭐ 49 · 📈) - Computing representations for atomistic machine learning.
BSD-3RustC++
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Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- FAIR Chemistry datasets (🥇25 · ⭐ 940 · 📉) - Datasets OC20, OC22, etc. Formerly known as Open Catalyst Project.
MITcatalysis - MPContribs (🥇22 · ⭐ 37 · 📉) - Platform for materials scientists to contribute and disseminate their materials data through Materials Project.
MIT - DeepQMC (🥇20 · ⭐ 360 · 📉) - Deep learning quantum Monte Carlo for electrons in real space.
MIT - tinker-hp (🥉9 · ⭐ 82 · 📉) - Tinker-HP: High-Performance Massively Parallel Evolution of Tinker on CPUs & GPUs.
Custom - fplib (🥉8 · ⭐ 7 · 📉) - libfp is a library for calculating crystalline fingerprints and measuring similarities of materials.
MITC-langsingle-paper
➕ Added Projects
Projects that were recently added to this best-of list.
- MLIPX - Machine-Learned Interatomic Potential eXploration (🥈14 · ⭐ 62 · 🐣) - Machine-Learned Interatomic Potential eXploration (mlipx) is designed at BASF for evaluating machine-learned..
MITbenchmarkingvizworkflows
Published by github-actions[bot] over 1 year ago
best-of-atomistic-machine-learning - Update: 2024.08.19-13.22
Removed category biomolecules in accordance with issue #125.
Published by github-actions[bot] almost 2 years ago
best-of-atomistic-machine-learning - Update: 2024.08.15
📈 Trending Up
Projects that have a higher project-quality score compared to the last update. There might be a variety of reasons, such as increased downloads or code activity.
- paper-qa (🥇27 · ⭐ 3.8K · 📈) - LLM Chain for answering questions from documents with citations.
Apache-2ai-agent - DScribe (🥇23 · ⭐ 390 · 📈) - DScribe is a python package for creating machine learning descriptors for atomistic systems.
Apache-2 - pymatviz (🥇21 · ⭐ 150 · 📈) - A toolkit for visualizations in materials informatics.
MITgeneral-toolprobabilistic - e3nn-jax (🥈20 · ⭐ 170 · 📈) - jax library for E3 Equivariant Neural Networks.
Apache-2
📉 Trending Down
Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- dpdata (🥇23 · ⭐ 200 · 📉) - Manipulating multiple atomic simulation data formats, including DeePMD-kit, VASP, LAMMPS, ABACUS, etc.
LGPL-3.0 - Best-of Machine Learning with Python (🥇21 · ⭐ 16K · 📉) - A ranked list of awesome machine learning Python libraries. Updated weekly.
CC-BY-4.0general-mlPython - Open Databases Integration for Materials Design (OPTIMADE) (🥈17 · ⭐ 76 · 📉) - Specification of a common REST API for access to materials databases.
CC-BY-4.0 - openmm-torch (🥈16 · ⭐ 180 · 📉) - OpenMM plugin to define forces with neural networks.
CustomML-IAPC++ - MatBench Discovery (🥈16 · ⭐ 82 · 📉) - An evaluation framework for machine learning models simulating high-throughput materials discovery.
MITdatasetsbenchmarkingmodel-repository
➕ Added Projects
Projects that were recently added to this best-of list.
- QH9 (🥈12 · ⭐ 470 · ➕) - A Quantum Hamiltonian Prediction Benchmark.
CC-BY-NC-SA 4.0ML-DFT - DPA-2 (🥇26 · ⭐ 1.4K · ➕) - Towards a universal large atomic model for molecular and material simulation https://doi.org/10.48550/arXiv.2312.15492.
LGPL-3.0ML-IAPpretrainedworkflowsdatasets - Graphormer (🥈16 · ⭐ 2K · ➕) - Graphormer is a general-purpose deep learning backbone for molecular modeling.
MITtransformerpretrained - OpenML (🥈16 · ⭐ 660 · 💤) - Open Machine Learning.
BSD-3datasets - PMTransformer (🥇16 · ⭐ 82 · ➕) - Universal Transfer Learning in Porous Materials, including MOFs.
MITtransfer-learningpretrainedtransformer - SevenNet (🥉14 · ⭐ 86 · ➕) - SevenNet (Scalable EquiVariance Enabled Neural Network) is a graph neural network interatomic potential package that..
GPL-3.0ML-IAPMDpretrained - HydraGNN (🥈14 · ⭐ 56 · ➕) - Distributed PyTorch implementation of multi-headed graph convolutional neural networks.
BSD-3 - ChatMOF (🥈13 · ⭐ 53 · ➕) - Predict and Inverse design for metal-organic framework with large-language models (llms).
MITgenerative - MACE-MP (🥉12 · ⭐ 33 · ➕) - Pretrained foundation models for materials chemistry.
MITML-IAPpretrainedrep-learnMD - Neural-Network-Models-for-Chemistry (🥈11 · ⭐ 59 · ➕) - A collection of Nerual Network Models for chemistry.
Unlicensedrep-learn - load-atoms (🥈11 · ⭐ 37 · ➕) - download and manipulate atomistic datasets.
MITdata-structures - AI4Chemistry course (🥈10 · ⭐ 130 · ➕) - EPFL AI for chemistry course, Spring 2023. https://schwallergroup.github.io/ai4chem_course.
MITchemistry - HamGNN (🥈9 · ⭐ 49 · ➕) - An E(3) equivariant Graph Neural Network for predicting electronic Hamiltonian matrix.
GPL-3.0rep-learnmagnetismC-lang - AI for Science paper collection (🥉9 · ⭐ 43 · 🐣) - List the AI for Science papers accepted by top conferences.
Apache-2 - Q-stack (🥈9 · ⭐ 14 · ➕) - Stack of codes for dedicated pre- and post-processing tasks for Quantum Machine Learning (QML).
MITexcited-statesgeneral-tool - MADICES Awesome Interoperability (🥉9 · ⭐ 1 · ➕) - Linked data interoperability resources of the Machine-actionable data interoperability for the chemical sciences..
MITdatasets - Awesome-Graph-Generation (🥉8 · ⭐ 260 · ➕) - A curated list of up-to-date graph generation papers and resources.
Unlicensedrep-learn - Awesome Neural SBI (🥉8 · ⭐ 80 · ➕) - Community-sourced list of papers and resources on neural simulation-based inference.
MITactive-learning - SiMGen (🥉8 · ⭐ 11 · ➕) - Zero Shot Molecular Generation via Similarity Kernels.
MITviz - Awesome-Crystal-GNNs (🥉7 · ⭐ 54 · ➕) - This repository contains a collection of resources and papers on GNN Models on Crystal Solid State Materials.
MIT - AIS Square (🥉7 · ⭐ 10 · 💤) - A collaborative and open-source platform for sharing AI for Science datasets, models, and workflows. Home of the..
LGPL-3.0community-resourcemodel-repository - rho_learn (🥉7 · ⭐ 3 · ➕) - A proof-of-concept framework for torch-based learning of the electron density and related scalar fields.
MIT - ChargE3Net (🥉6 · ⭐ 28 · ➕) - Higher-order equivariant neural networks for charge density prediction in materials.
MITrep-learn - ML for catalysis tutorials (🥉6 · ⭐ 8 · 💀) - A jupyter book repo for tutorial on how to use OCP ML models for catalysis.
MIT - Cephalo (🥉6 · ⭐ 5 · 🐣) - Multimodal Vision-Language Models for Bio-Inspired Materials Analysis and Design.
Apache-2generativemultimodalpretrained - KSR-DFT (🥇6 · ⭐ 4 · 💀) - Kohn-Sham regularizer for machine-learned DFT functionals.
Apache-2 - ACEpsi.jl (🥉6 · ⭐ 2 · 💤) - ACE wave function parameterizations.
MITrep-engJulia - crystal-text-llm (🥉5 · ⭐ 63 · 🐣) - Large language models to generate stable crystals.
CC-BY-NC-4.0materials-discovery - The Perovskite Database Project (🥉5 · ⭐ 58 · ➕) - Perovskite Database Project aims at making all perovskite device data, both past and future, available in a form..
Unlicensedcommunity-resource - Joint Multidomain Pre-Training (JMP) (🥉5 · ⭐ 32 · 🐣) - Code for From Molecules to Materials Pre-training Large Generalizable Models for Atomic Property Prediction.
CC-BY-NC-4.0pretrainedML-IAPgeneral-tool - QMLearn (🥈5 · ⭐ 11 · 💀) - Quantum Machine Learning by learning one-body reduced density matrices in the AO basis...
MIT - InfGCN for Electron Density Estimation (🥉5 · ⭐ 10 · 💤) - Official implementation of the NeurIPS 23 spotlight paper of InfGCN.
MITrep-learn - GN-MM (🥉5 · ⭐ 10 · 💀) - The Gaussian Moment Neural Network (GM-NN) package developed for large-scale atomistic simulations employing atomistic..
MITactive-learningMDrep-engmagnetism - EGraFFBench (🥉5 · ⭐ 8 · 💤) -
Unlicensedsingle-paperbenchmarkingML-IAP - GDB-9-Ex9 and ORNL_AISD-Ex (🥉5 · ⭐ 6 · 💤) - Distributed computing workflow for generation and analysis of large scale molecular datasets obtained running multi-..
Unlicensed - MXenes4HER (🥉5 · ⭐ 5 · 💀) - Predicting hydrogen evolution (HER) activity over 4500 MXene materials https://doi.org/10.1039/D3TA00344B.
GPL-3.0materials-discoverycatalysisscikit-learnsingle-paper - Geometric-GNNs (🥉4 · ⭐ 85 · ➕) - List of Geometric GNNs for 3D atomic systems.
Unlicenseddatasetseducationalrep-learn - MAGUS (🥉4 · ⭐ 56 · 💀) - Machine learning And Graph theory assisted Universal structure Searcher.
Unlicensedstructure-predictionactive-learning - Allegro-Legato (🥉4 · ⭐ 19 · 💤) - An extension of Allegro with enhanced robustness and time-to-failure.
MITMD - Mapping out phase diagrams with generative classifiers (🥉4 · ⭐ 7 · 💀) - Repository for our ``Mapping out phase diagrams with generative models paper.
MITphase-transition - automl-materials (🥉4 · ⭐ 5 · 💀) - AutoML for Regression Tasks on Small Tabular Data in Materials Design.
MITautoMLbenchmarkingsingle-paper - ML-atomate (🥉4 · ⭐ 3 · 💤) - Machine learning-assisted Atomate code for autonomous computational materials screening.
GPL-3.0active-learningworkflows - AI4ChemMat Hands-On Series (🥉4 · ⭐ 1 · ➕) - Hands-On Series organized by Chemistry and Materials working group at Argonne Nat Lab.
MPL-2.0 - ALEBREW (🥉3 · ⭐ 9 · 🐣) - Official repository for the paper Uncertainty-biased molecular dynamics for learning uniformly accurate interatomic..
CustomML-IAPMD - PyFLAME (🥉3 · 💀) - An automated approach for developing neural network interatomic potentials with FLAME..
Unlicensedactive-learningstructure-predictionstructure-optimizationrep-engFortran - tmQMwB97MV Dataset (🥉2 · ⭐ 5 · ➕) - Code for Applying Large Graph Neural Networks to Predict Transition Metal Complex Energies Using the tmQMwB97MV..
Unlicensedcatalysisrep-learn - AisNet (🥉2 · ⭐ 3 · 💀) - A Universal Interatomic Potential Neural Network with Encoded Local Environment Features..
MIT - nnp-pre-training (🥉1 · ⭐ 6 · 💤) - Synthetic pre-training for neural-network interatomic potentials.
UnlicensedpretrainedMD - mag-ace (🥉1 · ⭐ 2 · 💤) - Magnetic ACE potential. FORTRAN interface for LAMMPS SPIN package.
UnlicensedmagnetismMDFortran
Published by github-actions[bot] almost 2 years ago
best-of-atomistic-machine-learning - Update: 2024.07.04
📈 Trending Up
Projects that have a higher project-quality score compared to the last update. There might be a variety of reasons, such as increased downloads or code activity.
- DeePMD-kit (🥇28 · ⭐ 1.4K · 📈) - A deep learning package for many-body potential energy representation and molecular dynamics.
LGPL-3.0C++ - SchNetPack (🥇26 · ⭐ 750 · 📈) - SchNetPack - Deep Neural Networks for Atomistic Systems.
MIT - QUIP (🥈25 · ⭐ 340 · 📈) - libAtoms/QUIP molecular dynamics framework: https://libatoms.github.io.
GPL-2.0MDML-IAPrep-engFortran - Ultra-Fast Force Fields (UF3) (🥈15 · ⭐ 55 · 📈) - UF3: a python library for generating ultra-fast interatomic potentials.
Apache-2 - SchNetPack G-SchNet (🥈14 · ⭐ 42 · 📈) - G-SchNet extension for SchNetPack.
MIT
📉 Trending Down
Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- GPUMD (🥇21 · ⭐ 410 · 📉) - GPUMD is a highly efficient general-purpose molecular dynamic (MD) package and enables machine-learned potentials..
GPL-3.0MDC++electrostatics - DP-GEN (🥇21 · ⭐ 280 · 📉) - The deep potential generator to generate a deep-learning based model of interatomic potential energy and force field.
LGPL-3.0workflows - DIG: Dive into Graphs (🥈20 · ⭐ 1.8K · 📉) - A library for graph deep learning research.
GPL-3.0 - gpax (🥇17 · ⭐ 190 · 📉) - Gaussian Processes for Experimental Sciences.
MITprobabilisticactive-learning - SPICE (🥈11 · ⭐ 130 · 📉) - A collection of QM data for training potential functions.
MITML-IAPMD
➕ Added Projects
Projects that were recently added to this best-of list.
- LLaMP (🥈11 · ⭐ 36 · ➕) - A web app and Python API for multi-modal RAG framework to ground LLMs on high-fidelity materials informatics. An..
BSD-3materials-discoverycheminformaticsgenerativeMDlanguage-modelsPython - IPSuite (🥈14 · ⭐ 14 · ➕) - IPSuite is a Python toolkit for FAIR development and deployment of MLPs.
EPL-2.0workflowsHTCPythonactive-learningcommunity-resourceMD - ZnDraw (🥉16 · ⭐ 23 · ➕) - A powerful tool for visualizing, modifying, and analysing atomistic systems.
EPL-2.0MDgenerativeJavaScript - FAIR Chemistry datasets (🥇21 · ⭐ 700 · ➕) - Datasets OC20, OC22, etc. Formerly known as Open Catalyst Project.
MITcatalysis - fairchem (🥈19 · ⭐ 700 · ➕) - FAIR Chemistrys library of machine learning methods for chemistry. Formerly known as Open Catalyst Project (ocp).
Unlicensedpre-trainedrep-learncatalysis
Published by github-actions[bot] almost 2 years ago
best-of-atomistic-machine-learning - Update: 2024.05.23
📈 Trending Up
Projects that have a higher project-quality score compared to the last update. There might be a variety of reasons, such as increased downloads or code activity.
- NequIP (🥇24 · ⭐ 540 · 📈) - NequIP is a code for building E(3)-equivariant interatomic potentials.
MIT - Open Catalyst datasets (🥇20 · ⭐ 660 · 📈) - The datasets of the Open Catalyst project, OC20, OC22.
CC-BY-4.0 - ocp (🥈19 · ⭐ 660 · 📈) - ocp is the Open Catalyst Projects library of state-of-the-art machine learning algorithms for catalysis.
Unlicensed - Pre-trained OCP models (🥈19 · ⭐ 660 · 📈) - Pre-trained models released as part of the Open Catalyst Project.
Unlicensedpre-trained - Chemiscope (🥉17 · ⭐ 110 · 📈) - An interactive structure/property explorer for materials and molecules.
BSD-3JavaScript
📉 Trending Down
Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- DeepChem (🥇36 · ⭐ 5.2K · 📉) - Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology.
MIT - SchNetPack (🥇26 · ⭐ 730 · 📉) - SchNetPack - Deep Neural Networks for Atomistic Systems.
MIT - TorchMD-NET (🥇21 · ⭐ 280 · 📉) - Neural network potentials.
MITMDrep-learntransformerpre-trained - NVIDIA Deep Learning Examples for Tensor Cores (🥈20 · ⭐ 13K · 📉) - State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and..
Customeducationaldrug-discovery - mp-pyrho (🥉17 · ⭐ 34 · 📉) - Tools for re-griding volumetric quantum chemistry data for machine-learning purposes.
CustomML-DFT
➕ Added Projects
Projects that were recently added to this best-of list.
- calorine (🥉8 · ⭐ 10 · 💀) - A Python package for constructing and sampling neuroevolution potential models. https://doi.org/10.21105/joss.06264.
Custom - PyNEP (🥉2 · ➕) - A python interface of the machine learning potential NEP used in GPUMD.
MIT - SOMD (🥉1 · ➕) -
AGPL-3.0ML-IAPactive-learning - apax (🥈18 · ⭐ 11 · ➕) - A flexible and performant framework for training machine learning potentials.
MIT
Published by github-actions[bot] almost 2 years ago
best-of-atomistic-machine-learning - Update: 2024.03.17
📈 Trending Up
Projects that have a higher project-quality score compared to the last update. There might be a variety of reasons, such as increased downloads or code activity.
- cdk (🥇24 · ⭐ 460 · 📈) - The Chemistry Development Kit.
LGPL-2.1cheminformaticsJava - AI for Science Resources (🥈14 · ⭐ 360 · 📈) - List of resources for AI4Science research, including learning resources.
GPL-3.0 license - QH9: A Quantum Hamiltonian Prediction Benchmark (🥈14 · ⭐ 360 · 📈) - Artificial Intelligence Research for Science (AIRS).
CC-BY-NC-SA 4.0ML-DFT - Artificial Intelligence for Science (AIRS) (🥉14 · ⭐ 360 · 📈) - Artificial Intelligence Research for Science (AIRS).
GPL-3.0 licenserep-learngenerativeML-IAPMDML-DFTML-WFTbiomolecules - QHNet (🥈14 · ⭐ 360 · 📈) - Artificial Intelligence Research for Science (AIRS).
GPL-3.0rep-learn
📉 Trending Down
Projects that have a lower project-quality score compared to the last update. There might be a variety of reasons such as decreased downloads or code activity.
- TorchMD-NET (🥇22 · ⭐ 270 · 📉) - Neural network potentials.
MITMDrep-learntransformerpre-trained - DIG: Dive into Graphs (🥈21 · ⭐ 1.7K · 📉) - A library for graph deep learning research.
GPL-3.0 - mlcolvar (🥈16 · ⭐ 74 · 📉) - A unified framework for machine learning collective variables for enhanced sampling simulations.
MITenhanced-sampling
➕ Added Projects
Projects that were recently added to this best-of list.
- pymatviz (🥉17 · ⭐ 78 · ➕) - A toolkit for visualizations in materials informatics.
MITgeneral-toolprobabilistic - FAENet (🥈11 · ⭐ 21 · ➕) -
MIT - GNoME Explorer (🥉7 · ⭐ 500 · 🐣) - Graph Networks for Materials Exploration Database.
Apache-2datasetsmaterials-discovery - Materials Discovery: GNoME (🥈6 · ⭐ 500 · 🐣) -
Apache-2rep-learn,datasets - halex (🥉2 · ⭐ 1 · 🐣) - Hamiltonian Learning for Excited States https://doi.org/10.48550/arXiv.2311.00844.
UnlicensedML-WFTexcited-states - TorchMD-NET (🥈20 · ⭐ 220 · ➕) - Neural network potentials based on graph neural networks and equivariant transformers.
MITML-IAPrep-learntranformerpre-trained - LLM-Prop (🥉8 · ⭐ 4 · ➕) - A repository for the LLM-Prop implementation.
None found - MLXDM (🥉7 · ⭐ 4 · 💤) - A Neural Network Potential with Rigorous Treatment of Long-Range Dispersion https://doi.org/10.1039/D2DD00150K.
MITlong-range - paper-data-redundancy (🥉7 · ⭐ 3 · 🐣) - Codes and data for the paper On the redundancy in large material datasets: efficient and robust learning with less data.
BSD-3small-datasingle-paper - paper-ml-robustness-material-property (🥉4 · ⭐ 3 · 💤) -
BSD-3datasets,single-paper - Materials Data Facility (MDF) (🥈9 · ⭐ 10 · 💤) - A simple way to publish, discover, and access materials datasets. Publication of very large datasets supported (e.g.,..
Apache-2 - OPTIMADE Python tools (🥇25 · ⭐ 54 · ➕) - Tools for implementing and consuming OPTIMADE APIs in Python.
MIT - OPTIMADE Tutorial Exercises (🥈8 · ⭐ 11 · ➕) - Tutorial exercises for the OPTIMADE API.
MITdatasets - optimade.science (🥉8 · ⭐ 8 · ➕) - A sky-scanner Optimade browser-only GUI.
MITdatasets - Does this material exist? (🥉4 · ⭐ 2 · ➕) - Vote on whether you think predicted crystal structures could be synthesised.
MITfor-funmaterials-discovery - OPTIMADE providers dashboard (🥉4 · ⭐ 1 · ➕) - A dashboard of known providers.
Unlicensed - GPUMD (🥇20 · ⭐ 300 · ➕) - GPUMD is a highly efficient general-purpose molecular dynamic (MD) package and enables machine-learned potentials..
GPL-3.0MDC++electrostatics - nep-data (🥉1 · ⭐ 9 · 💀) - Data related to the NEP machine-learned potential of GPUMD.
UnlicensedML-IAPMDtransport-phenomena
Published by github-actions[bot] almost 2 years ago
best-of-atomistic-machine-learning - Update: 2023.12.03-21.16
➕ Added Projects
Projects that were recently added to this best-of list.
- Open Databases Integration for Materials Design (OPTIMADE) (🥈17 · ⭐ 59 · ➕) - Specification of a common REST API for access to materials databases.
CC-BY-4.0 - MODNet (🥇17 · ⭐ 53 · ➕) - MODNet: a framework for machine learning materials properties.
MITpre-trainedsmall-datatransfer-learning - Metatensor (🥉15 · ⭐ 25 · ➕) - Storage format for equivariant atomistic machine learning.
BSD-3 - mlcolvar (🥈16 · ⭐ 59 · ➕) - A unified framework for machine learning collective variables for enhanced sampling simulations.
MITenhanced-sampling - JAX-DFT (🥇25 · ⭐ 32K · ➕) - Google Research.
Apache-2 - DIG: Dive into Graphs (🥈21 · ⭐ 1.7K · ➕) - A library for graph deep learning research.
GPL-3.0 - ATOM3D (🥇18 · ⭐ 280 · 💤) - ATOM3D: tasks on molecules in three dimensions.
MITbiomoleculesbenchmarking - ChemCrow (🥇17 · ⭐ 320 · 🐣) - Chemcrow.
MIT - ChemDataExtractor (🥈16 · ⭐ 270 · 💀) - Automatically extract chemical information from scientific documents.
MITliterature-data - ChemNLP project (🥈16 · ⭐ 110 · ➕) - ChemNLP project.
MITdatasets - GT4SD - Generative Toolkit for Scientific Discovery (🥈15 · ⭐ 280 · ➕) - Gradio apps of generative models in GT4SD.
MITgenerativepre-traineddrug-discovery - dlpack (🥉14 · ⭐ 800 · 💤) - common in-memory tensor structure.
Apache-2C++ - Geometric GNN Dojo (🥇12 · ⭐ 350 · ➕) - New to geometric GNNs: try our practical notebook, prepared for MPhil students at the University of Cambridge.
MITrep-learn - QH9: A Quantum Hamiltonian Prediction Benchmark (🥈12 · ⭐ 280 · ➕) - Artificial Intelligence for Science (AIRS).
CC-BY-NC-SA 4.0ML-DFT - QHNet (🥈12 · ⭐ 280 · ➕) - Artificial Intelligence for Science (AIRS).
GPL-3.0rep-learn - Grad DFT (🥈12 · ⭐ 43 · ➕) - Grad-DFT is a JAX-based library enabling the differentiable design and experimentation of exchange-correlation..
Apache-2 - pretrained-gnns (🥇10 · ⭐ 870 · ➕) - Strategies for Pre-training Graph Neural Networks.
MITpre-trained - DSECOP (🥈10 · ⭐ 31 · ➕) - This repository contains data science educational materials developed by DSECOP Fellows.
CCO-1.0 - pairnequip (🥉10 · ⭐ 29 · 💀) - LAMMPS pair style for NequIP.
MITML-IAP<a href="https://en.wikipedia.org/wiki/Featurelearning">rep-learn - tinker-hp (🥉9 · ⭐ 69 · ➕) - Tinker-HP: High-Performance Massively Parallel Evolution of Tinker on CPUs & GPUs.
Custom - lie-nn (🥈9 · ⭐ 22 · ➕) - Tools for building equivariant polynomials on reductive Lie groups.
MITrep-learn - TurboGAP (🥉9 · ⭐ 14 · ➕) - The TurboGAP code.
CustomFortran - MoLFormers UI (🥉8 · ⭐ 140 · ➕) - Repository for MolFormer.
Apache-2transformerLanguage modelspre-traineddrug-discovery - MoLFormer (🥉8 · ⭐ 140 · ➕) - Repository for MolFormer.
Apache-2transformerpre-traineddrug-discovery - pairallegro (🥉8 · ⭐ 26 · ➕) - LAMMPS pair style for Allegro deep learning interatomic potentials with parallelization support.
MITML-IAP<a href="https://en.wikipedia.org/wiki/Featurelearning">rep-learn - chemlift (🥉8 · ⭐ 10 · 🐣) - Language-interfaced fine-tuning for chemistry.
MIT - T-e3nn (🥉8 · ⭐ 6 · 💤) - Time-reversal Euclidean neural networks based on e3nn.
MITmagnetism - Awesome Neural Geometry (🥉7 · ⭐ 780 · ➕) - A curated collection of resources and research related to the geometry of representations in the brain, deep networks,..
Unlicensededucationalrep-learn - COATI (🥉6 · ⭐ 59 · 🐣) - COATI: multi-modal contrastive pre-training for representing and traversing chemical space.
Apache-2drug-discoverypre-trainedrep-learn - Mat2Spec (🥉6 · ⭐ 24 · 💀) -
MITspectroscopy - NequIP-JAX (🥉5 · ⭐ 10 · ➕) - JAX implementation of the NequIP interatomic potential.
Unlicensed - MAPI_LLM (🥉5 · ⭐ 4 · ➕) - A LLM application developed during the LLM March MADNESS Hackathon https://doi.org/10.1039/D3DD00113J.
MITdataset - soapturbo (🥉5 · ⭐ 4 · 💤) - soapturbo comprises a series of libraries to be used in combination with QUIP/GAP and TurboGAP.
CustomFortran - MACE-tutorials (🥉5 · ⭐ 3 · 🐣) - Another set of tutorials for the MACE interatomic potential by one of the authors.
MITML-IAPrep-learnMD - Point Edge Transformer (PET) (🥉5 · ➕) - Point Edge Transformer.
Unlicensedrep-learntransformer - ChemDataWriter (🥉4 · ⭐ 8 · 🐣) - ChemDataWriter is a transformer-based library for automatically generating research books in the chemistry area.
MITliterature-data - torch_spex (🥉4 · ➕) - Spherical expansions in PyTorch.
Unlicensed - PeriodicPotentials (🥉4 · 💀) - A Periodic table app that displays potentials based on the selected elements.
MITcommunity-resourcevizJavaScript - SciBot (🥉3 · ⭐ 14 · 🐣) - SciBot is a simple demo of building a domain-specific chatbot for science.
Unlicensed - CatBERTa (🥉3 · ⭐ 13 · ➕) - Large Language Model for Catalyst Property Prediction.
Unlicensedtransformercatalysis - A3MD (🥉2 · ⭐ 5 · 💀) - MPNN-like + Analytic Density Model = Accurate electron densities.
Unlicensedrepresentation-learningsingle-paper - LAMMPS-style pair potentials with GAP (🥉2 · ⭐ 3 · 💀) - A tutorial on how to create LAMMPS-style pair potentials and use them in combination with GAP potentials to run MD..
UnlicensedML-IAPMDrep-eng - MEGNetSparse (🥉2 · ⭐ 1 · 🐣) - A library imlementing a graph neural network with sparse representation from Code for Kazeev, N., Al-Maeeni, A.R.,..
MITmaterial-defect - Allegro-JAX (🥉1 · ⭐ 11 · 🐣) - JAX implementation of the Allegro interatomic potential.
Unlicensed - APET (🥉1 · ⭐ 2 · ➕) - Atomic Positional Embedding-based Transformer.
GPL-3.0density-of-statestransformer - mlp (🥉1 · ⭐ 1 · 💀) - Proper orthogonal descriptors for efficient and accurate interatomic potentials...
UnlicensedJulia
Published by github-actions[bot] almost 2 years ago
best-of-atomistic-machine-learning - Update: 2023.08.25-14.45
➕ Added Projects
Projects that were recently added to this best-of list.
- MLDensity_tutorial (🥉1 · ⭐ 3 · 🐣) - Tutorial files to work with ML for the charge density in molecules and solids.
❗Unlicensed - KFAC-JAX (🥇26 · ⭐ 10K · ➕) - Open source code for AlphaFold.
Apache-2 - AlphaFold (🥇24 · ⭐ 10K · ➕) - Open source code for AlphaFold.
Apache-2 - DM21 (🥇21 · ⭐ 12K · ➕) - This package provides a PySCF interface to the DM21 (DeepMind 21) family of exchange-correlation functionals described..
Apache-2 - DeepQMC (🥇20 · ⭐ 280 · ➕) - Deep learning quantum Monte Carlo for electrons in real space.
MIT - FermiNet (🥈15 · ⭐ 550 · ➕) - An implementation of the Fermionic Neural Network for ab-initio electronic structure calculations.
Apache-2 - GElib (🥉9 · ⭐ 15 · ➕) - C++/CUDA library for SO(3) equivariant operations.
MPL-2.0 - Cormorant (🥉6 · ⭐ 51 · 💀) - Codebase for Cormorant Neural Networks.
Unlicensed - Autobahn (🥉5 · ⭐ 26 · 💀) - Repository for Autobahn: Automorphism Based Graph Neural Networks.
MIT - SphericalNet ( ⭐ 2 · 💤) - Implementation of Clebsch-Gordan Networks (CGnet: https://arxiv.org/pdf/1806.09231.pdf) by GElib & cnine libraries in..
Unlicensed - cnine (➕) -
Unlicensed - chemrev-gpr (🥉4 · ⭐ 5 · 💀) - Notebooks accompanying the paper on GPR in materials and molecules in Chemical Reviews 2020.
Unlicensed - paper-qa (🥇23 · ⭐ 2.6K · 🐣) - LLM Chain for answering questions from documents with citations.
Apache-2 - Best-of Machine Learning with Python (🥇22 · ⭐ 14K · ➕) - A ranked list of awesome machine learning Python libraries. Updated weekly.
CC-BY-4.0general-mlPython - Graph-based Deep Learning Literature (🥈18 · ⭐ 4.3K · ➕) - links to conference publications in graph-based deep learning.
MITgeneral-mlrep-learn - Awesome Materials Informatics (🥉11 · ⭐ 290 · ➕) - Curated list of known efforts in materials informatics = modern materials science.
Customtopics/materials-informatics - The Collection of Database and Dataset Resources in Materials Science (🥉8 · ⭐ 160 · ➕) - A list of databases, datasets and books/handbooks where you can find materials properties for machine learning..
Unlicenseddatasets - A Highly Opinionated List of Open-Source Materials Informatics Resources (🥉7 · ⭐ 93 · 💀) - A Highly Opinionated List of Open Source Materials Informatics Resources.
MIT - GitHub topic materials-informatics (➕) -
Unlicensed - cdk (🥇25 · ⭐ 430 · ➕) - The Chemistry Development Kit.
LGPL-2.1cheminformaticsJava - MPContribs (🥇23 · ⭐ 32 · ➕) - Platform for materials scientists to contribute and disseminate their materials data through Materials Project.
MIT - Open Catalyst datasets (🥇18 · ⭐ 450 · ➕) - The datasets of the Open Catalyst project, OC20, OC22.
CC-BY-4.0 - GT4SD (🥇18 · ⭐ 230 · ➕) - GT4SD, an open-source library to accelerate hypothesis generation in the scientific discovery process.
MITpre-traineddrug-discoveryrep-learn - CHGNet (🥈18 · ⭐ 79 · 🐣) - Pretrained universal neural network potential for charge-informed atomistic modeling https://chgnet.lbl.gov.
CustomMDpre-trainedelectrostaticsmagnetismstructure-relaxation - escnn (🥈17 · ⭐ 200 · ➕) - Equivariant Steerable CNNs Library for Pytorch https://quva-lab.github.io/escnn/.
Custom - MatBench (🥈16 · ⭐ 77 · ➕) - Matbench: Benchmarks for materials science property prediction.
MITdatasetsbenchmarking - NNPOps (🥈15 · ⭐ 61 · ➕) - High-performance operations for neural network potentials.
MITMDC++ - AI for Science Resources (🥉14 · ⭐ 220 · 🐣) - List of resources for AI4Science research, including learning resources.
GPL-3.0 license - Artificial Intelligence for Science (AIRS) (🥉14 · ⭐ 220 · 🐣) - Artificial Intelligence for Science (AIRS).
GPL-3.0 licenserep-learngenerativeMLIAPMDML-DFTML-WFTbiomolecules - openmm-torch (🥈14 · ⭐ 130 · ➕) - OpenMM plugin to define forces with neural networks.
CustomMLIAPC++ - SPICE (🥈14 · ⭐ 89 · ➕) - A collection of QM data for training potential functions.
MITMLIAPMD - mp-pyrho (🥉14 · ⭐ 27 · ➕) -
CustomML-DFT - GlassPy (🥈13 · ⭐ 14 · ➕) - Python module for scientists working with glass materials.
GPL-3.0 - mat2vec (🥈12 · ⭐ 590 · ➕) - Supplementary Materials for Tshitoyan et al. Unsupervised word embeddings capture latent knowledge from materials..
MITrep-learn - TensorMol (🥈12 · ⭐ 260 · 💀) - Tensorflow + Molecules = TensorMol.
GPL-3.0single-paper - OpenMM-ML (🥉10 · ⭐ 50 · ➕) - High level API for using machine learning models in OpenMM simulations.
MITMLIAP - ai4materialdesign (🥈10 · ⭐ 1 · ➕) - Code for Kazeev, N., Al-Maeeni, A.R., Romanov, I. et al. Sparse representation for machine learning the properties of..
Apache-2pre-trained<a href="https://en.wikipedia.org/wiki/Crystallographicdefect">material-defect - EDM (🥉9 · ⭐ 290 · 💀) - E(3) Equivariant Diffusion Model for Molecule Generation in 3D.
MIT - PROPhet (🥈9 · ⭐ 59 · 💀) - PROPhet is a code to integrate machine learning techniques with first-principles quantum chemistry approaches.
GPL-3.0MLIAPMDsingle-paperC++ - escnnjax (🥉8 · ⭐ 21 · 🐣) - Equivariant Steerable CNNs Library for Pytorch https://quva-lab.github.io/escnn/.
<a href="https://github.com/emilemathieu/escnnjax/blob/master/LICENSE">Custom - SkipAtom (🥈8 · ⭐ 21 · 💀) - Distributed representations of atoms, inspired by the Skip-gram model.
MIT - wfl (🥉8 · ⭐ 13 · ➕) - Workflow is a Python toolkit for building interatomic potential creation and atomistic simulation workflows.
UnlicensedworkflowsHTC - EquiformerV2 (🥉6 · ⭐ 62 · 🐣) - [arXiv23] EquiformerV2: Improved Equivariant Transformer for Scaling to Higher-Degree Representations.
MIT - MEGAN (🥈6 · ⭐ 1 · ➕) - Minimal implementation of graph attention student model architecture.
MITXAIrep-learn - tensorfieldnetworks (🥉5 · ⭐ 140 · 💀) -
MIT - EquivariantOperators.jl (🥉5 · ⭐ 17 · 💤) -
MITJulia - SciGlass (🥉5 · ⭐ 6 · ➕) - The database contains a vast set of data on the properties of glass materials.
MIT - CraTENet (🥉5 · ⭐ 6 · ➕) - An attention-based deep neural network for thermoelectric transport properties.
MITtransport-phenomena - closed-loop-acceleration-benchmarks (🥈5 · ➕) - Data and scripts in support of the publication By how much can closed-loop frameworks accelerate computational..
MITmaterials-discoveryactive-learningsingle-paper - Closed-loop acceleration benchmarks (🥈5 · ➕) - Data and scripts in support of the publication By how much can closed-loop frameworks accelerate computational..
MITmaterials-discoveryactive-learningsingle-paper - ML-for-CurieTemp-Predictions (🥉5 · 🐣) - Machine Learning Predictions of High-Curie-Temperature Materials.
MITsingle-papermagnetism - Linear vs blackbox (🥉4 · 💤) - Code and data related to the publication: Interpretable models for extrapolation in scientific machine learning.
MITXAIsingle-paperrep-eng - Atom2Vec (🥉3 · ⭐ 24 · 💀) - Atom2Vec: a simple way to describe atoms for machine learning.
Unlicensed - sldiscovery (🥉3 · ⭐ 5 · 💤) - Data processing and models related to Quantifying the performance of machine learning models in materials discovery.
Apache-2<a href="https://www.psik2022.net/program/symposia#h.phM6hJbQD9dex">materials-discoverysingle-paper - Element encoder (🥉3 · ⭐ 5 · 💀) - Autoencoder neural network to compress properties of atomic species into a vector representation.
GPL-3.0single-paper - DeepCDP (🥉3 · ⭐ 2 · ➕) - DeepCDP: Deep learning Charge Density Prediction.
Unlicensed - MateriApps (➕) -
Unlicensed
Published by github-actions[bot] almost 2 years ago
best-of-atomistic-machine-learning - Update: 2023.06.12-20.27
➕ Added Projects
Projects that were recently added to this best-of list.
- Deep Graph Library (DGL) (🥇37 · ⭐ 12K · ➕) - Python package built to ease deep learning on graph,..
Apache-2 - DeepChem (🥇36 · ⭐ 4.4K · ➕) - Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry,..
MIT - RDKit (🥇30 · ⭐ 2.1K · ➕) -
BSD-3 - DeePMD-kit (🥇28 · ⭐ 1.1K · ➕) - A deep learning package for many-body potential..
❗️LGPL-3.0 - Matminer (🥇27 · ⭐ 390 · ➕) - Data mining for materials science.
❗Unlicensed - SchNetPack (🥇25 · ⭐ 600 · ➕) - SchNetPack - Deep Neural Networks for Atomistic Systems.
❗Unlicensed - DScribe (🥇25 · ⭐ 320 · ➕) - DScribe is a python package for creating machine learning..
Apache-2 - QUIP (🥈25 · ⭐ 290 · ➕) - libAtoms/QUIP molecular dynamics framework:..
❗Unlicensed - paper-qa (🥇24 · ⭐ 2.6K · 🐣) - LLM Chain for answering questions from documents with citations.
Apache-2 - e3nn (🥇23 · ⭐ 680 · ➕) - A modular framework for neural networks with Euclidean symmetry.
❗Unlicensed - dgl-lifesci (🥇23 · ⭐ 580 · ➕) - Python package for graph neural networks in chemistry and..
Apache-2 - MEGNet (🥇22 · ⭐ 450 · ➕) - Graph Networks as a Universal Machine Learning Framework for..
BSD-3 - DP-GEN (🥇22 · ⭐ 220 · ➕) - The deep potential generator to generate a deep-learning..
❗️LGPL-3.0 - dpdata (🥇22 · ⭐ 130 · ➕) - Manipulating multiple atomic simulation data formats, including..
❗️LGPL-3.0 - kgcnn (🥈22 · ⭐ 75 · ➕) - Graph convolution with tf.keras.
MIT - NVIDIA Deep Learning Examples for Tensor Cores (🥇21 · ⭐ 11K · ➕) - State-of-the-Art Deep Learning scripts organized by..
❗Unlicensed - TorchANI (🥇21 · ⭐ 390 · ➕) - Accurate Neural Network Potential on PyTorch.
MIT - MAML (🥈21 · ⭐ 240 · ➕) - Python for Materials Machine Learning, Materials Descriptors, Machine..
BSD-3 - NequIP (🥇20 · ⭐ 390 · ➕) - NequIP is a code for building E(3)-equivariant interatomic potentials.
MIT - JARVIS-Tools (🥈20 · ⭐ 220 · ➕) - JARVIS-Tools: an open-source software package for..
❗Unlicensed - ocp (🥈19 · ⭐ 410 · ➕) - ocp is the Open Catalyst Projects library of state-of-the-art machine..
MIT - exmol (🥇19 · ⭐ 240 · ➕) - Explainer for black box models that predict molecule properties.
MIT - FitSNAP (🥈19 · ⭐ 100 · ➕) - Software for generating SNAP machine-learning interatomic..
❗️GPL-2.0 - FLARE (🥈18 · ⭐ 220 · ➕) - An open-source Python package for creating fast and accurate interatomic..
MIT - e3nn-jax (🥈18 · ⭐ 110 · ➕) - jax library for E3 Equivariant Neural Networks.
Apache-2 - MatGL (Materials Graph Library) (🥈18 · ⭐ 70 · ➕) - Graph deep learning library for materials.
BSD-3 - Scikit-Matter (🥈18 · ⭐ 58 · ➕) -
BSD-3scikit-learn - MALA (🥇18 · ⭐ 33 · ➕) - Materials Learning Algorithms. A framework for machine learning materials..
BSD-3 - M3GNet (🥈17 · ⭐ 160 · ➕) - Materials graph network with 3-body interactions featuring a DFT..
BSD-3 - XenonPy (🥈17 · ⭐ 110 · ➕) - XenonPy is a Python Software for Materials Informatics.
BSD-3 - Chemiscope (🥇17 · ⭐ 86 · ➕) -
BSD-3 - MAST-ML (🥈17 · ⭐ 82 · ➕) - MAterials Simulation Toolkit for Machine Learning (MAST-ML).
MIT - DADApy (🥇17 · ⭐ 63 · ➕) - Distance-based Analysis of DAta-manifolds in python.
Apache-2 - Uni-Fold (🥇16 · ⭐ 260 · ➕) - An open-source platform for developing protein models beyond..
Apache-2 - QML (🥉16 · ⭐ 180 · 💀) - QML: Quantum Machine Learning.
MIT - ALIGNN (🥈16 · ⭐ 130 · ➕) - Atomistic Line Graph Neural Network.
❗Unlicensed - sGDML (🥈16 · ⭐ 110 · ➕) - sGDML - Reference implementation of the Symmetric Gradient Domain..
MIT - CatLearn (🥇16 · ⭐ 86 · ➕) -
❗️GPL-3.0 - benchmarking-gnns (🥈15 · ⭐ 2.2K · 💀) - Repository for benchmarking graph neural networks.
MIT - Uni-Mol (🥈15 · ⭐ 340 · ➕) - Official Repository for the Uni-Mol Series Methods.
MIT - MoLeR (🥇15 · ⭐ 180 · ➕) - Implementation of MoLeR: a generative model of molecular graphs which..
MIT - Librascal (🥇15 · ⭐ 68 · ➕) - A scalable and versatile library to generate representations..
❗️LGPL-2.1 - SpheriCart (🥇15 · ⭐ 34 · 🐣) - Multi-language library for the calculation of spherical..
Apache-2 - KLIFF (🥈15 · ⭐ 26 · ➕) - KIM-based Learning-Integrated Fitting Framework (KLIFF).
❗️LGPL-2.1 - CCS_fit (🥈15 · ⭐ 5 · ➕) - Curvature Constrained Splines.
❗️GPL-3.0 - n2p2 (🥈14 · ⭐ 180 · 💤) - n2p2 - A Neural Network Potential Package.
❗️GPL-3.0 - DeepH-pack (🥇14 · ⭐ 110 · ➕) - Deep neural networks for density functional theory Hamiltonian.
MIT - gpax (🥈14 · ⭐ 81 · ➕) - Structured Gaussian Processes and Deep Kernel Learning.
MIT - JARVIS-Leaderboard (🥇14 · ⭐ 19 · ➕) - This project provides benchmark-performances for..
❗Unlicensed - SISSO (🥈13 · ⭐ 160 · ➕) - A data-driven method combining symbolic regression and..
Apache-2 - MACE (🥈13 · ⭐ 160 · ➕) - MACE - Fast and accurate machine learning interatomic potentials..
❗Unlicensed - Automatminer (🥉13 · ⭐ 120 · 💀) - An automatic engine for predicting materials properties.
❗Unlicensed - PyXtalFF (🥈13 · ⭐ 68 · ➕) - Machine Learning Interatomic Potential Predictions.
❗Unlicensed - Ultra-Fast Force Fields (UF3) (🥈13 · ⭐ 28 · 💤) - UF3: a python library for generating ultra-fast..
Apache-2 - Equistore (🥉13 · ⭐ 23 · ➕) - Storage format for equivariant atomistic machine learning.
BSD-3 - aviary (🥇13 · ⭐ 23 · ➕) - The Wren sits on its Roost in the Aviary.
MIT - Polynomials4ML.jl (🥈13 · ⭐ 3 · ➕) - Polynomials for ML: fast evaluation, batching,..
MIT - Crystal Graph Convolutional Neural Networks (CGCNN) (🥈12 · ⭐ 470 · 💀) - Crystal graph convolutional neural networks for..
MIT - DMFF (🥈12 · ⭐ 97 · ➕) - DMFF (Differentiable Molecular Force Field) is a Jax-based python..
❗️LGPL-3.0 - SchNetPack G-SchNet (🥈12 · ⭐ 18 · ➕) - G-SchNet extension for SchNetPack.
MIT - Compositionally-Restricted Attention-Based Network (CrabNet) (🥈12 · ⭐ 10 · ➕) - Predict materials properties using only the..
MIT - OpenChem (🥉11 · ⭐ 530 · 💀) - OpenChem: Deep Learning toolkit for Computational Chemistry and Drug..
MIT - Deep Learning for Molecules and Materials Book (🥇11 · ⭐ 500 · ➕) -
❗Unlicensed - ReLeaSE (🥇11 · ⭐ 300 · 💀) - Deep Reinforcement Learning for de-novo Drug Design.
MIT - DeepLearningLifeSciences (🥇11 · ⭐ 290 · 💀) - Example code from the book Deep Learning for the Life..
MIT - ANI-1 (🥈11 · ⭐ 200 · 💀) - ANI-1 neural net potential with python interface (ASE).
MIT - gptchem (🥈11 · ⭐ 150 · 🐣) - Use GPT-3 to solve chemistry problems.
MIT - MolSkill (🥈11 · ⭐ 73 · 🐣) - Learning chemical intuition from humans in the loop...
MIT - Neural fingerprint (nfp) (🥈11 · ⭐ 52 · 💤) - Keras layers for end-to-end learning with rdkit and..
❗Unlicensed - AMPtorch (🥉11 · ⭐ 50 · ➕) - AMPtorch: Atomistic Machine Learning Package (AMP) - PyTorch.
❗️GPL-3.0 - SIMPLE-NN (🥈11 · ⭐ 41 · 💀) - SIMPLE-NN(SNU Interatomic Machine-learning PotentiaL packagE..
❗️GPL-3.0 - synspace (🥈11 · ⭐ 25 · 🐣) - Synthesis generative model.
MIT - ACE1Pack.jl (🥈11 · ⭐ 9 · ➕) - Provides convenience functionality for the usage of ACE1.jl,..
MIT - GDC (🥈10 · ⭐ 210 · ➕) - Graph Diffusion Convolution, as proposed in Diffusion Improves Graph..
MIT - Neural Force Field (🥈10 · ⭐ 170 · ➕) - Neural Network Force Field based on PyTorch.
MIT - ASAP (🥈10 · ⭐ 100 · 💀) - ASAP is a package that can quickly analyze and visualize datasets of..
MIT - nlcc (🥉10 · ⭐ 41 · ➕) - Natural language computational chemistry command line..
❗Unlicensed - Pacemaker (🥈10 · ⭐ 36 · ➕) - Python package for fitting ACE potentials.
❗Unlicensed - jarvis-tools-notebooks (🥈10 · ⭐ 36 · ➕) - A Google-Colab Notebook Collection for Materials..
❗Unlicensed - flare++ (🥉10 · ⭐ 33 · 💀) - A many-body extension of the FLARE code.
MIT - cmlkit (🥈10 · ⭐ 29 · 💀) - tools for machine learning in condensed matter physics and quantum..
MIT - NeuralXC (🥈10 · ⭐ 28 · 💀) - Implementation of a machine learned density functional.
BSD-3 - OpenKIM (🥈10 · ⭐ 28 · 💀) - The Open Knowledgebase of Interatomic Models (OpenKIM) aims..
❗️LGPL-2.1 - Finetuna (🥇10 · ⭐ 23 · ➕) - Active Learning for Machine Learning Potentials.
MIT - iam-notebooks (🥈10 · ⭐ 16 · ➕) - Jupyter notebooks for the lectures of the Introduction to..
Apache-2 - Rascaline (🥈10 · ⭐ 11 · ➕) - Computing representations for atomistic machine learning.
BSD-3 - NNsforMD (🥈10 · ⭐ 9 · 💤) - Neural network class for molecular dynamics to predict potential..
MIT - molecularGNN_smiles (🥈9 · ⭐ 240 · 💀) - The code of a graph neural network (GNN) for..
Apache-2 - Allegro (🥉9 · ⭐ 190 · ➕) - Allegro is an open-source code for building highly scalable and..
MIT - SchNet (🥉9 · ⭐ 170 · 💀) - SchNet - a deep learning architecture for quantum chemistry.
MIT - QDF for molecule (🥇9 · ⭐ 160 · 💀) - Quantum deep field: data-driven wave function, electron..
MIT - DeePKS-kit (🥈9 · ⭐ 92 · ➕) - a package for developing machine learning-based chemically..
❗️LGPL-3.0 - PiNN (🥉9 · ⭐ 89 · ➕) - A Python library for building atomic neural networks.
BSD-3 - GATGNN: Global Attention Graph Neural Network (🥈9 · ⭐ 58 · 💤) - Pytorch Repository for our work: Graph convolutional..
MIT - matsciml (🥈9 · ⭐ 43 · ➕) - Open MatSci ML Toolkit is a single framework for prototyping and..
MIT - GAP (🥉9 · ⭐ 28 · ➕) - Gaussian Approximation Potential (GAP).
❗Unlicensed - ACE1.jl (🥉9 · ⭐ 18 · ➕) - Atomic Cluster Expansion for Modelling Invariant Atomic..
❗Unlicensed - BenchML (🥉9 · ⭐ 13 · ➕) - ML benchmarking and pipeling framework.
Apache-2 - bVAE-IM (🥈9 · ⭐ 3 · 🐣) - Implementation of Chemical Design with GPU-based Ising Machine.
MIT - ML4pXRDs (🥈9 · 🐣) - Contains code to train neural networks based on simulated powder XRDs..
MIT - DimeNet (🥉8 · ⭐ 240 · ➕) - DimeNet and DimeNet++ models, as proposed in Directional..
❗Unlicensed - ANI-1 Dataset (🥈8 · ⭐ 87 · 💤) - A data set of 20 million calculated off-equilibrium..
MIT - MoleculeNet Leaderboard (🥈8 · ⭐ 68 · 💀) -
MIT - ACE.jl (🥉8 · ⭐ 58 · ➕) - Parameterisation of Equivariant Properties of Particle..
❗Unlicensed - cG-SchNet (🥉8 · ⭐ 43 · ➕) - cG-SchNet - a conditional generative neural network for 3d molecular..
MIT - Sketchmap (🥉8 · ⭐ 39 · ➕) - Suite of programs to perform non-linear dimensionality..
❗️GPL-3.0 - SNAP (🥉8 · ⭐ 31 · 💀) - Repository for spectral neighbor analysis potential (SNAP) model..
BSD-3 - DeeperGATGNN (🥉8 · ⭐ 30 · ➕) - Scalable graph neural networks for materials property prediction.
MIT - So3krates (MLFF) (🥉8 · ⭐ 29 · ➕) - Build neural networks for machine learning force fields with..
MIT - DeepErwin (🥇8 · ⭐ 27 · ➕) - DeepErwin is a python 3.8+ package that implements and..
❗Unlicensed - Atomistic Adversarial Attacks (🥉8 · ⭐ 24 · 💤) - Code for performing adversarial attacks on atomistic..
MIT - UVVisML (🥉8 · ⭐ 10 · ➕) - Predict optical properties of molecules with machine..
MIT - Equisolve (🥉8 · ⭐ 3 · ➕) - A package tasked with taking equistore objects and computing machine..
BSD-3 - SE(3)-Transformers (🥉7 · ⭐ 380 · 💀) - code for the SE3 Transformers paper:..
❗Unlicensed - RDKit Tutorials (🥈7 · ⭐ 180 · ➕) - Tutorials to learn how to work with the RDKit.
❗Unlicensed - GemNet (🥉7 · ⭐ 140 · ➕) - GemNet model in PyTorch, as proposed in GemNet: Universal..
❗Unlicensed - G-SchNet (🥉7 · ⭐ 110 · ➕) - G-SchNet - a generative model for 3d molecular structures.
MIT - DTNN (🥉7 · ⭐ 77 · 💀) - Deep Tensor Neural Network.
MIT - AIMNet (🥉7 · ⭐ 75 · 💀) - Atoms In Molecules Neural Network Potential.
MIT - PhysNet (🥉7 · ⭐ 72 · 💀) - Code for training PhysNet models.
MIT - uncertainty_benchmarking (🥉7 · ⭐ 33 · 💀) - Various code/notebooks to benchmark different ways we..
❗Unlicensed - torchchem (🥉7 · ⭐ 32 · 💀) - An experimental repo for experimenting with PyTorch models.
MIT - ALF (🥉7 · ⭐ 15 · 🐣) - A framework for performing active learning for training..
❗Unlicensed - AdsorbML (🥉7 · ⭐ 14 · ➕) -
MIT - SA-GPR (🥉7 · ⭐ 14 · 💤) - Public repository for symmetry-adapted Gaussian Process..
❗️LGPL-3.0 - Libnxc (🥈7 · ⭐ 12 · 💀) - A library for using machine-learned exchange-correlation..
MPL-2.0 - SALTED (🥈7 · ⭐ 9 · ➕) - Program for doing symmetry-adapted learning of three-dimensional..
❗️GPL-3.0 - CGAT (🥉7 · ⭐ 9 · ➕) - Crystal graph attention neural networks for materials prediction.
MIT - ACEhamiltonians (🥈7 · ⭐ 5 · ➕) - Provides tools for constructing, fitting, and..
❗Unlicensed - ACEfit (🥉7 · ⭐ 2 · ➕) -
MIT - BestPractices (🥈6 · ⭐ 120 · 💀) - Things that you should (and should not) do in your Materials..
MIT - Equiformer (🥉6 · ⭐ 90 · 🐣) - [ICLR23 Spotlight] Equiformer: Equivariant Graph Attention..
MIT - ANI-1x Datasets (🥈6 · ⭐ 44 · 💀) - The ANI-1ccx and ANI-1x data sets, coupled-cluster and density..
MIT - Applied AI for Materials (🥈6 · ⭐ 41 · 💀) - Course materials for Applied AI for Materials Science..
❗Unlicensed - COMP6 Benchmark dataset (🥈6 · ⭐ 34 · 💀) - COMP6 Benchmark dataset for ML potentials.
MIT - DeepDFT (🥉6 · ⭐ 32 · ➕) - Official implementation of DeepDFT model.
MIT - SIMPLE-NN v2 (🥉6 · ⭐ 19 · ➕) -
❗️GPL-3.0 - PACE (🥉6 · ⭐ 16 · ➕) - The
pair_styleACE MLP implemented in LAMMPS, aka ML-PACE.❗Unlicensed - CBFV (🥈6 · ⭐ 11 · 💀) - Tool to quickly create a composition-based feature vector.
❗Unlicensed - testing-framework (🥉6 · ⭐ 11 · 💀) - The purpose of this repository is to aid the testing..
❗Unlicensed - NICE (🥈6 · ⭐ 10 · ➕) - NICE (N-body Iteratively Contracted Equivariants) is a set of tools designed..
MIT - fplib (🥈6 · ⭐ 7 · 💀) - a fingerprint library.
MIT - SOAPxx (🥈6 · ⭐ 7 · 💀) - A SOAP implementation.
❗️GPL-2.0 - COSMO Toolbox (🥉6 · ⭐ 6 · 💤) - Assorted libraries and utilities for atomistic..
❗Unlicensed - COSMO Software Cookbook (🥈6 · ⭐ 2 · 🐣) - The COSMO cookbook contains recipes for atomic-scale..
BSD-3 - pyLODE (🥈6 · ⭐ 2 · 💤) - Pythonic implementation of LOng Distance Equivariants.
Apache-2 - Data Handling, DoE and Statistical Analysis for Material Chemists (🥈6 · 🐣) - Notebooks for workshops of DoE course, hosted by the..
❗️GPL-3.0 - Per-Site CGCNN (🥉6 · 🐣) - Crystal graph convolutional neural networks for predicting..
MIT - Per-site PAiNN (🥉6 · ➕) - Fork of PaiNN for PerovskiteOrderingGCNNs.
MIT - GEOM (🥉5 · ⭐ 120 · 💀) - GEOM: Energy-annotated molecular conformations.
❗Unlicensed - JAXChem (🥉5 · ⭐ 74 · 💀) - JAXChem is a JAX-based deep learning library for complex and..
❗Unlicensed - AI4Science101 (🥉5 · ⭐ 63 · 💤) - AI for Science.
❗Unlicensed - SchNOrb (🥉5 · ⭐ 49 · 💀) - Unifying machine learning and quantum chemistry with a deep neural..
MIT - hippynn (🥉5 · ⭐ 39 · ➕) - python library for atomistic machine learning.
❗Unlicensed - Machine Learning for Materials Hard and Soft (🥉5 · ⭐ 29 · 💤) - ESI-DCAFM-TACO-VDSP Summer School on Machine Learning..
❗Unlicensed - MACE-Jax (🥉5 · ⭐ 28 · 🐣) - Equivariant machine learning interatomic potentials in JAX.
❗Unlicensed - milad (🥉5 · ⭐ 26 · ➕) - Moment Invariants Local Atomic Descriptor.
❗Unlicensed - MACE-Layer (🥉5 · ⭐ 20 · ➕) - Higher order equivariant graph neural networks for 3D point clouds.
MIT - chargetransfernnp (🥉5 · ⭐ 20 · 💀) - Graph neural network potential with charge transfer.
MIT - SCFNN (🥉5 · ⭐ 13 · 💀) - Self-consistent determination of long-range electrostatics..
MIT - rxngenerator (🥉5 · ⭐ 11 · 💤) - A generative model for molecular generation via multi-step..
MIT - CatGym (🥉5 · ⭐ 9 · 💀) - Surface segregation using Deep Reinforcement Learning.
❗Unlicensed - graphite (🥉5 · ⭐ 9 · ➕) - A repository for implementing graph network models based on..
❗Unlicensed - ACEHAL (🥉5 · ⭐ 7 · 🐣) - Hyperactive Learning (HAL) Python interface for..
❗Unlicensed - Alchemical learning (🥉5 · ⭐ 2 · ➕) - Code for the Modeling high-entropy transition metal..
BSD-3 - MolSLEPA (🥉5 · ⭐ 2 · 🐣) - Interpretable Fragment-based Molecule Design with Self-learning..
MIT - COSMO tools (🥉5 · ⭐ 1 · 💤) - Scripts, jupyter nbs, and general helpful stuff from COSMO..
❗Unlicensed - Computational Autonomy for Materials Discovery (CAMD) (🥈5 · ⭐ 1 · 🐣) - Agent-based sequential learning software for..
Apache-2 - MAChINE (🥉5 · ⭐ 1 · 🐣) - Client-Server Web App to introduce usage of ML in materials science to..
MIT - linear-regression-benchmarks (🥉5 · ⭐ 1 · 💀) - Data sets used for linear regression benchmarks.
MIT - MALADA (🥉5 · ➕) - MALA Data Acquisition: Helpful tools to build data for MALA.
BSD-3 - atombyatom (🥉5 · 🐣) - Atom-by-atom design of metal oxide catalysts for the..
❗Unlicensed - ML-in-chemistry-101 (🥉4 · ⭐ 49 · 💀) - The course materials for Machine Learning in..
❗Unlicensed - DeepH-E3 (🥉4 · ⭐ 20 · 🐣) - General framework for E(3)-equivariant neural network..
MIT - GLAMOUR (🥉4 · ⭐ 17 · ➕) - Graph Learning over Macromolecule Representations.
❗Unlicensed - glp (🥉4 · ⭐ 10 · 🐣) - tools for graph-based machine-learning potentials in jax.
MIT - TensorPotential (🥉4 · ⭐ 5 · ➕) - TensorFlow based interface for ML potentials..
❗Unlicensed - PANNA (🥉4 · ⭐ 5 · 💀) - A package to train and validate all-to-all connected network..
❗Unlicensed - charge-density-models (🥉4 · ⭐ 2 · ➕) - Tools to build charge density models using ocpmodels.
MIT - magnetism-prediction (🥉4 · ⭐ 1 · ➕) - DFT-aided Machine Learning Search for Magnetism in..
Apache-2 - Wigner Kernels (🥉4 · 🐣) - Collection of programs to benchmark Wigner kernels.
❗Unlicensed - CSNN (🥉4 · 💤) - Primary codebase of CSNN - Concentric Spherical Neural Network for 3D..
BSD-3 - Coarse-Graining-Auto-encoders (🥉3 · ⭐ 18 · 💀) -
❗Unlicensed - Graph Transport Network (🥉3 · ⭐ 14 · ➕) - Graph transport network (GTN), as proposed in..
❗Unlicensed - ML-DFT (🥉3 · ⭐ 13 · 💀) - A package for density functional approximation using machine learning.
MIT - CSPML (crystal structure prediction with machine learning-based element substitution) (🥈3 · ⭐ 11 · 💤) - Original implementation of CSPML.
❗Unlicensed - AGOX (🥈3 · ⭐ 10 · 💀) - AGOX is a package for global optimization of atomic system..
❗Unlicensed - FieldSchNet (🥉3 · ⭐ 9 · 💀) -
❗Unlicensed - SPINNER (🥈3 · ⭐ 7 · 💀) - SPINNER (Structure Prediction of Inorganic crystals using..
❗️GPL-3.0 - 3DSC Database (🥉3 · ⭐ 5 · ➕) - Repo for the paper publishing the superconductor..
❗Unlicensed - ACEatoms (🥉3 · ⭐ 2 · ➕) - Generic code for modelling atomic properties using ACE.
❗Unlicensed - e3psi (🥉3 · ⭐ 2 · ➕) - Equivariant machine learning library for learning from electronic..
❗️LGPL-3.0 - ACE Workflows (🥉3 · 🐣) - Workflow Examples for ACE Models.
❗Unlicensed - JAX-MD (🥇3 · ➕) -
❗Unlicensed - Magpie (🥉3 · ➕) - Materials Agnostic Platform for Informatics and Exploration (Magpie).
MIT - Visual Graph Datasets (🥉3 · ➕) - Datasets for the training of graph neural networks..
❗Unlicensed - MEGAN: Multi Explanation Graph Attention Student (🥉3 · ➕) - Minimal implementation of graph attention student..
❗Unlicensed - MLatom (🥉3 · ➕) -
❗️Custom - xDeepH (🥉2 · ⭐ 15 · 🐣) - Extended DeepH (xDeepH) method for magnetic materials.
MIT - SingleNN (🥉2 · ⭐ 5 · 💀) - An efficient package for training and executing neural-..
❗Unlicensed - PiNN Lab (🥉2 · ⭐ 2 · ➕) -
❗️GPL-3.0 - BERT-PSIE-TC (🥉2 · ⭐ 2 · 🐣) - A dataset of Curie temperatures automatically extracted from..
MIT - quantum-structure-ml (🥉2 · ⭐ 1 · ➕) - Multi-class classification model for predicting the..
❗Unlicensed - AMP (🥉2 · ➕) - Amp is an open-source package designed to easily bring machine-learning to..
❗Unlicensed - BOSS (🥉2 · ➕) - Bayesian Optimization Structure Search (BOSS).
❗Unlicensed - gprep (🥉2 · 💀) - Fitting DFTB repulsive potentials with GPR.
❗Unlicensed - MLIP-3 (🥉1 · ⭐ 8 · 🐣) - MLIP-3: Active learning on atomic environments with Moment..
❗Unlicensed - gkx: Green-Kubo Method in JAX (🥉1 · ⭐ 2 · 🐣) - Green-Kubo + JAX + MLPs = Anharmonic Thermal..
MIT - q-pac (🥉1 · ⭐ 2 · 💀) - Kernel charge equilibration method.
❗Unlicensed - kdft (🥉1 · ⭐ 1 · 💀) - The Kernel Density Functional (KDF) code allows generating ML based..
❗Unlicensed - MALA Tutorial (🥉1 · ⭐ 1 · 🐣) - A full MALA hands-on tutorial.
❗Unlicensed - SISSO++ (🥉1 · ⭐ 1 · 💀) - C++ Implementation of SISSO with python bindings.
❗Unlicensed - Point Edge Transformer (🥉1 · ➕) - Smooth, exact rotational symmetrization for deep..
❗Unlicensed - Descriptor Embedding and Clustering for Atomisitic-environment Framework (DECAF) ( ⭐ 2 · ➕) - Provides a workflow to obtain clustering of local..
❗Unlicensed - KmdPlus ( ⭐ 1 · 🐣) - This module contains a class for treating kernel mean descriptor..
❗Unlicensed - interface-lammps-mlip-3 (➕) - An interface between LAMMPS and MLIP (version 3).
❗Unlicensed - MLDensity (➕) - Linear Jacobi-Legendre expansion of the charge density for machine..
❗Unlicensed
Published by github-actions[bot] almost 2 years ago
best-of-atomistic-machine-learning - v2023.12.25
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Published by Irratzo over 2 years ago
best-of-atomistic-machine-learning - v2023.12.21
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Published by Irratzo over 2 years ago