tlomodel
Epidemiology modelling framework for the Thanzi la Onse project
Science Score: 75.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Academic email domains
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✓Institutional organization owner
Organization ucl has institutional domain (www.ucl.ac.uk) -
○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (10.6%) to scientific vocabulary
Keywords
Repository
Epidemiology modelling framework for the Thanzi la Onse project
Basic Info
- Host: GitHub
- Owner: UCL
- License: mit
- Language: Python
- Default Branch: master
- Homepage: https://www.tlomodel.org/
- Size: 159 MB
Statistics
- Stars: 28
- Watchers: 6
- Forks: 15
- Open Issues: 249
- Releases: 0
Topics
Metadata Files
README.md
Thanzi la Onse model
The Thanzi la Onse model (TLOmodel) is a part of the Thanzi la Onse (Health for All) Collaboration. Our fundamental aim is to develop the use of epidemiological and economic science to effect a step-change in the way that health priorities are addressed through policy interventions in low-income countries. We are doing this by developing a model that represents explicitly the generation of health gains in a population, which can be used to examine the effect of resource allocation, management and clinical practice, in order to contribute to informing decision-making.
- Documentation: https://www.tlomodel.org
- Getting started: https://www.tlomodel.org/getting_started.html
- Contributing: https://www.tlomodel.org/contributing.html
- Bug reports: https://github.com/UCL/TLOmodel/issues
- Wiki: https://github.com/UCL/TLOmodel/wiki
Project team
TLOmodel is developed in a collaboration between:
- Kamuzu University of Health Sciences
- MRC Centre for Global Infectious Disease Analysis, Imperial College London
- Institute for Global Health, University College London
- Centre for Advanced Research Computing, University College London
- Centre for Health Economics, University of York
- East, Central, and Southern African Health Community
It benefits from a close partnership between this team and the Ministry of Health, Malawi.
A full list of contributors is available in the documentation.
Acknowledgements
This work has been funded by grants from Wellcome, GCRF and UKRI.
Owner
- Name: University College London
- Login: UCL
- Kind: organization
- Email: rc-softdev@ucl.ac.uk
- Website: www.ucl.ac.uk
- Repositories: 300
- Profile: https://github.com/UCL
Citation (CITATION.cff)
# Author list automatically generated from contributors.yaml by running # python src/scripts/automation/update_citation.py # Any manual updates to author list here may be overwritten cff-version: 1.2.0 title: The Thanzi La Onse Model doi: 10.5281/zenodo.10144015 message: If you use this software, please cite it using the metadata from this file. type: software authors: - given-names: Timothy family-names: Hallett orcid: https://orcid.org/0000-0002-9681-0424 affiliation: Imperial College London website: https://www.imperial.ac.uk/people/timothy.hallett - given-names: Andrew family-names: Phillips orcid: https://orcid.org/0000-0003-2384-4807 affiliation: University College London website: https://profiles.ucl.ac.uk/5430 - given-names: Asif family-names: Tamuri orcid: https://orcid.org/0000-0001-6633-3789 affiliation: University College London website: https://www.homepages.ucl.ac.uk/~ucbtaut/ - given-names: Tim family-names: Colbourn orcid: https://orcid.org/0000-0002-6917-6552 affiliation: University College London website: https://profiles.ucl.ac.uk/3084 - given-names: Joseph family-names: Collins orcid: https://orcid.org/0000-0003-4801-7218 affiliation: University College London website: https://profiles.ucl.ac.uk/70734 - given-names: Iwona family-names: Hawryluk orcid: https://orcid.org/0000-0001-6919-4366 affiliation: Imperial College London website: https://www.imperial.ac.uk/people/i.hawryluk19 - given-names: Britta family-names: Jewell orcid: https://orcid.org/0000-0003-4275-8509 website: https://www.imperial.ac.uk/people/b.jewell - given-names: Ines family-names: Li Lin orcid: https://orcid.org/0000-0002-1945-3208 affiliation: University College London - given-names: Tara family-names: Mangal orcid: https://orcid.org/0000-0001-9222-8632 affiliation: Imperial College London website: https://www.imperial.ac.uk/people/t.mangal - given-names: Robbie family-names: Manning-Smith orcid: https://orcid.org/0000-0002-9457-2821 affiliation: University College London - given-names: Sakshi family-names: Mohan orcid: https://orcid.org/0000-0002-1268-1769 affiliation: University of York website: https://www.york.ac.uk/che/staff/research/sakshi-mohan/ - given-names: Wingston family-names: Ng'ambi orcid: https://orcid.org/0000-0003-3967-905X affiliation: Kamuzu University of Health Sciences website: https://www.linkedin.com/in/wingston-ng-ambi-7950707b - given-names: Bingling family-names: She orcid: https://orcid.org/0000-0001-5976-8987 affiliation: Imperial College London website: https://www.imperial.ac.uk/people/b.she - given-names: Matthew family-names: Gillman - given-names: Mosè family-names: Giordano orcid: https://orcid.org/0000-0002-7218-2873 affiliation: University College London website: https://giordano.github.io/ - given-names: Matthew family-names: Graham orcid: https://orcid.org/0000-0001-9104-7960 affiliation: University College London website: https://matt-graham.github.io - given-names: Emmanuel family-names: Mnjowe affiliation: Kamuzu University of Health Sciences website: https://www.linkedin.com/in/emmanuel-mnjowe-067481162 - given-names: Stefan family-names: Piatek orcid: https://orcid.org/0000-0002-3028-5292 affiliation: University College London website: https://profiles.ucl.ac.uk/67238 - given-names: Jonathan family-names: Cooper orcid: https://orcid.org/0000-0001-6009-3542 affiliation: University College London website: https://profiles.ucl.ac.uk/59377 - given-names: Dimitra family-names: Salmanidou orcid: https://orcid.org/0000-0002-2147-0787 affiliation: University College London website: https://www.researchgate.net/profile/Dimitra-Salmanidou - given-names: William family-names: Graham orcid: https://orcid.org/0000-0003-0058-263X affiliation: University College London website: https://willgraham01.github.io/ - given-names: Margherita family-names: Molaro orcid: https://orcid.org/0000-0002-1841-4274 affiliation: Imperial College London - given-names: Eva family-names: Janoušková orcid: https://orcid.org/0000-0002-4104-0119 affiliation: University College London website: https://profiles.ucl.ac.uk/90260 - given-names: Rachel family-names: Murray-Watson affiliation: Imperial College London orcid: https://orcid.org/0000-0001-9079-5975 repository-code: https://github.com/UCL/TLOmodel url: https://tlomodel.org abstract: Our fundamental aim is to develop the use of epidemiological and economic science to effect a step-change in the way that health priorities are addressed through policy interventions in low-income countries. We are doing this by developing a model that represents explicitly the generation of health gains in a population, which can be used to examine the effect of resource allocation, management and clinical practice, in order to contribute to informing decision-making. keywords: - Epidemiology - Healthcare Systems - Health-Economics - Simulation Modelling - Individual-based Modelling license: MIT
GitHub Events
Total
- Fork event: 11
- Create event: 143
- Release event: 3
- Issues event: 113
- Watch event: 14
- Delete event: 258
- Member event: 4
- Issue comment event: 502
- Push event: 1,354
- Gollum event: 37
- Pull request event: 190
- Pull request review event: 372
- Pull request review comment event: 388
Last Year
- Fork event: 11
- Create event: 143
- Release event: 3
- Issues event: 113
- Watch event: 14
- Delete event: 258
- Member event: 4
- Issue comment event: 502
- Push event: 1,354
- Gollum event: 37
- Pull request event: 190
- Pull request review event: 372
- Pull request review comment event: 388
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 197
- Total pull requests: 352
- Average time to close issues: 12 months
- Average time to close pull requests: about 2 months
- Total issue authors: 22
- Total pull request authors: 25
- Average comments per issue: 2.19
- Average comments per pull request: 2.55
- Merged pull requests: 197
- Bot issues: 0
- Bot pull requests: 8
Past Year
- Issues: 66
- Pull requests: 133
- Average time to close issues: 13 days
- Average time to close pull requests: 11 days
- Issue authors: 16
- Pull request authors: 17
- Average comments per issue: 0.86
- Average comments per pull request: 1.11
- Merged pull requests: 68
- Bot issues: 0
- Bot pull requests: 5
Top Authors
Issue Authors
- tbhallett (50)
- tamuri (30)
- matt-graham (25)
- EvaJanouskova (16)
- mmsuarezcosta (12)
- mnjowe (9)
- joehcollins (9)
- tdm32 (8)
- marghe-molaro (7)
- stefpiatek (5)
- thewati (4)
- jonc125 (4)
- sakshimohan (4)
- BinglingICL (3)
- willGraham01 (3)
Pull Request Authors
- tbhallett (60)
- matt-graham (46)
- tamuri (37)
- tdm32 (29)
- marghe-molaro (23)
- willGraham01 (21)
- EvaJanouskova (20)
- joehcollins (19)
- mnjowe (18)
- sakshimohan (11)
- RachelMurray-Watson (9)
- stefpiatek (8)
- dependabot[bot] (8)
- andrew-phillips-1 (7)
- thewati (7)
Top Labels
Issue Labels
Pull Request Labels
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