Recent Releases of variantalker
variantalker - GATK latest version and minor updates
GATK to v4.5.0.0 new parameters: transcript list, splicing window size new filtering strategy: keep all pathogenic variants irrespective of other parameters such as variant classification minor bug fix
- Python
Published by zhanyinx over 2 years ago
variantalker - GATK latest version and minor updates
1) GATK to v4.5.0.0 2) new parameters: transcript list, splicing window size 3) new filtering strategy: keep all pathogenic variants irrespective of other parameters such as variant classification 4) minor bug fix
- Python
Published by zhanyinx over 2 years ago
variantalker - Introduce civic, alpha missense, update database to nov 2023
♻️ Refactor code to accomodate patient based annotation, add filter module ✨ Add civic, alphamissense annotation 🗃️ Update all database up to november 2023 📚 Update docs 🚑 Fix small bugs
- Python
Published by zhanyinx over 2 years ago
variantalker - Workaround funcotator bug
1) add workaround to funcotator bug in gencode failure 2) improve documentation 3) improve biomarker pipelines
- Python
Published by zhanyinx about 3 years ago
variantalker - v1.1
1) Introduce nfcore schema 2) introduce single samplesheet input
- Python
Published by zhanyinx about 3 years ago
variantalker - v1.0
Official release of variantalker v1.0
- Python
Published by zhanyinx about 3 years ago