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phasegen

Computation and inference on exact solutions of coalescent distributions under diverse demographic scenarios.

https://github.com/sendrowski/phasegen

Science Score: 39.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 2 DOI reference(s) in README
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (8.6%) to scientific vocabulary

Keywords

coalescent-theory maximum-likelihood-estimation phase-type-distributions population-genetics
Last synced: 6 months ago · JSON representation

Repository

Computation and inference on exact solutions of coalescent distributions under diverse demographic scenarios.

Basic Info
Statistics
  • Stars: 5
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Topics
coalescent-theory maximum-likelihood-estimation phase-type-distributions population-genetics
Created almost 3 years ago · Last pushed 7 months ago
Metadata Files
Readme License Citation

README.md

PhaseGen

codecov Documentation Status PyPI version Conda Version License: GPL v3 Downloads DOI

phasegen is a package for computation and inference on exact solutions of coalescent distributions under diverse demographic scenarios. phasegen leverages phase-type theory and supports a wide range of demographic models and coalescent tree statistics.

Please see the documentation for all the details.

Owner

  • Name: Janek Sendrowski
  • Login: Sendrowski
  • Kind: user
  • Location: Aarhus
  • Company: Aarhus University

GitHub Events

Total
  • Release event: 2
  • Watch event: 3
  • Issue comment event: 1
  • Push event: 19
  • Create event: 1
Last Year
  • Release event: 2
  • Watch event: 3
  • Issue comment event: 1
  • Push event: 19
  • Create event: 1

Dependencies

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poetry.lock pypi
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DESCRIPTION cran
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