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nbproject

Light-weight Jupyter notebook tracker.

https://github.com/laminlabs/nbproject

Science Score: 57.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 2 DOI reference(s) in README
  • ○
    Academic publication links
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (9.2%) to scientific vocabulary
Last synced: 6 months ago · JSON representation ·

Repository

Light-weight Jupyter notebook tracker.

Basic Info
  • Host: GitHub
  • Owner: laminlabs
  • License: apache-2.0
  • Language: Python
  • Default Branch: main
  • Homepage: https://nbproject.lamin.ai
  • Size: 522 KB
Statistics
  • Stars: 34
  • Watchers: 3
  • Forks: 0
  • Open Issues: 30
  • Releases: 31
Created almost 4 years ago · Last pushed 10 months ago
Metadata Files
Readme License Citation

README.md

Stars coverage pypi doi

nbproject

Light-weight Jupyter notebook manager. Track metadata, imports, and integrity.

💡 We recommend lamindb.track() instead of nbproject to:

  • consistently track data sources across notebooks, pipelines & apps
  • full provenance for datasets that you pull and push from notebooks
  • manage notebook copying & integrate with Google Colab
  • broader compatibility

Like nbproject, lamindb is open-source.

nbproject will continue to be maintained as a utility for lamindb.

Install: pyversions

pip install nbproject

Also consider installing ipylab for interactive features if you use nbpoject on jupyter lab

pip install ipylab

Get started:

``` import nbproject

nbproject.header() # Tracks notebook, displays metadata

do things

nbproject.publish() # Checks consecutiveness & title, sets version & imported python packages ```

More: Read the docs.

Owner

  • Name: Lamin
  • Login: laminlabs
  • Kind: organization

Data infrastructure for biology.

Citation (CITATION.cff) 

cff-version: 1.2.0
title: "nbproject: Manage Jupyter notebooks"
authors:
  - family-names: Rybakov
    given-names: Sergei
    orcid: https://orcid.org/0000-0002-4944-6586
  - family-names: Wolf
    given-names: Alex
    orcid: https://orcid.org/0000-0002-8760-7838
url: https://github.com/laminlabs/nbproject
preferred-citation:
  type: article
  title: "nbproject: Manage Jupyter notebooks"
  authors:
    - family-names: Rybakov
      given-names: Sergei
      orcid: https://orcid.org/0000-0002-4944-6586
    - family-names: Heumos
      given-names: Lukas
      orcid: https://orcid.org/0000-0002-8937-3457
    - family-names: Wolf
      given-names: Alex
      orcid: https://orcid.org/0000-0002-8760-7838
  doi: 10.56528/nbp
  journal: Lamin Reports
  year: 2022

GitHub Events

Total
  • Create event: 8
  • Issues event: 5
  • Release event: 4
  • Watch event: 1
  • Delete event: 2
  • Issue comment event: 7
  • Push event: 20
  • Pull request event: 6
Last Year
  • Create event: 8
  • Issues event: 5
  • Release event: 4
  • Watch event: 1
  • Delete event: 2
  • Issue comment event: 7
  • Push event: 20
  • Pull request event: 6

Committers

Last synced: almost 3 years ago

All Time
  • Total Commits: 361
  • Total Committers: 5
  • Avg Commits per committer: 72.2
  • Development Distribution Score (DDS): 0.543
Top Committers
Name Email Commits
Alex Wolf f****f@g****m 165
github-actions g****s@g****m 125
Sergei Rybakov k****d@g****m 64
Sunny Sun 3****n@u****m 6
bpenteado 3****o@u****m 1
Committer Domains (Top 20 + Academic)
github.com: 1

Issues and Pull Requests

Last synced: 8 months ago

All Time
  • Total issues: 44
  • Total pull requests: 75
  • Average time to close issues: 5 months
  • Average time to close pull requests: about 10 hours
  • Total issue authors: 8
  • Total pull request authors: 5
  • Average comments per issue: 1.93
  • Average comments per pull request: 2.48
  • Merged pull requests: 70
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 5
  • Average time to close issues: 14 days
  • Average time to close pull requests: 26 minutes
  • Issue authors: 1
  • Pull request authors: 2
  • Average comments per issue: 1.0
  • Average comments per pull request: 1.4
  • Merged pull requests: 5
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • falexwolf (28)
  • Zethson (7)
  • Koncopd (3)
  • sunnyosun (2)
  • jggatter (1)
  • ricomnl (1)
  • ap-- (1)
  • alex-trapp (1)
Pull Request Authors
  • falexwolf (45)
  • Koncopd (32)
  • sunnyosun (4)
  • Zethson (3)
  • bpenteado (1)
Top Labels
Issue Labels
bug (1) enhancement (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • pypi 6,182 last-month
  • Total dependent packages: 21
  • Total dependent repositories: 7
  • Total versions: 57
  • Total maintainers: 3
pypi.org: nbproject

nbproject: Manage Jupyter notebooks.

  • Versions: 57
  • Dependent Packages: 21
  • Dependent Repositories: 7
  • Downloads: 6,182 Last month
Rankings
Dependent packages count: 0.5%
Downloads: 4.1%
Dependent repos count: 5.6%
Average: 10.2%
Stargazers count: 10.9%
Forks count: 29.8%
Maintainers (3)
falexwolf lamindev Koncopd
Last synced: 6 months ago

Dependencies

.github/workflows/build.yml actions
  • CumulusDS/get-yaml-paths-action v0.1.0 composite
  • actions/cache v3 composite
  • actions/checkout v3 composite
  • actions/setup-python v3 composite
  • codecov/codecov-action v2 composite
  • nwtgck/actions-netlify v1.2 composite
.github/workflows/latest-changes.yml actions
  • actions/checkout v2 composite
  • docker://tiangolo/latest-changes 0.0.3 composite
pyproject.toml pypi
  • importlib-metadata *
  • ipylab *
  • lamin_utils >=0.5.0
  • orjson *
  • packaging *
  • pydantic <2.0.0
  • pyyaml *
  • stdlib_list python_version < '3.10'