Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (15.1%) to scientific vocabulary
Keywords
Repository
Probabilistic Numerics in Python.
Basic Info
- Host: GitHub
- Owner: probabilistic-numerics
- License: mit
- Language: Python
- Default Branch: main
- Homepage: http://probnum.org
- Size: 154 MB
Statistics
- Stars: 453
- Watchers: 7
- Forks: 60
- Open Issues: 75
- Releases: 29
Topics
Metadata Files
README.md
Home | Tutorials | API Reference | Contributing
[](https://github.com/probabilistic-numerics/probnum/actions?query=workflow%3ACI-build) [](https://codecov.io/gh/probabilistic-numerics/probnum/branch/main) [](https://probabilistic-numerics.github.io/probnum-benchmarks/benchmarks/) [](https://pypi.org/project/probnum/)ProbNum is a Python toolkit for solving numerical problems in linear algebra, optimization, quadrature and differential equations. ProbNum solvers not only estimate the solution of the numerical problem, but also its uncertainty (numerical error) which arises from finite computational resources, discretization and stochastic input. This numerical uncertainty can be used in downstream decisions.
Currently, available solvers are:
- Linear solvers: Solve $A x = b$ for $x$.
- ODE solvers: Solve $\dot{y}(t) = f(y(t), t)$ for $y$.
- Integral solvers (quadrature): Solve $F = \int_D f(x) \mathrm{d}p(x)$ for $F$.
Lower level structure includes:
- Random variables and random processes, as well as arithmetic operations thereof.
- Memory-efficient and lazy implementation of linear operators.
- Filtering and smoothing for (probabilistic) state-space models, mostly variants of Kalman filters.
ProbNum is underpinned by the research field probabilistic numerics (PN), which lies at the intersection of machine learning and numerics. PN aims to quantify uncertainty arising from intractable or incomplete numerical computation and from stochastic input using the tools of probability theory. The general vision of probabilistic numerics is to provide well-calibrated probability measures over the output of a numerical routine, which then can be propagated along the chain of computation.
Installation
To get started install ProbNum using pip.
bash
pip install probnum
Alternatively, you can install the latest version from source.
bash
pip install git+https://github.com/probabilistic-numerics/probnum.git
Note: This package is currently work in progress, therefore interfaces are subject to change.
Documentation and Examples
For tips on getting started and how to use this package please refer to the documentation. It contains a quickstart guide and Jupyter notebooks illustrating the basic usage of the ProbNum solvers.
Package Development
This repository is currently under development and benefits from contribution to the code, examples or documentation. Please refer to the contribution guidelines before making a pull request.
A list of core contributors to ProbNum can be found here.
Citing ProbNum
If you are using ProbNum in your research, please cite as provided. The "Cite this repository" button on the sidebar generates a BibTeX entry or an APA entry.
License and Contact
This work is released under the MIT License.
Please submit an issue on GitHub to report bugs or request changes.
Owner
- Name: Probabilistic Numerics
- Login: probabilistic-numerics
- Kind: organization
- Website: probabilistic-numerics.org
- Repositories: 3
- Profile: https://github.com/probabilistic-numerics
Probabilistic numerics interprets numerical methods as inference procedures by taking a probabilistic viewpoint.
Citation (CITATION.cff)
cff-version: 1.2.0
message: If you use this software, please cite it as below.
title: ProbNum
authors:
- name: ProbNum Team
license: MIT
url: "https://github.com/probabilistic-numerics/probnum"
preferred-citation:
type: generic
title: "ProbNum: Probabilistic Numerics in Python"
authors:
- family-names: Wenger
given-names: Jonathan
orcid: "https://orcid.org/0000-0003-2261-1331"
- family-names: Krämer
given-names: Nicholas
- family-names: Pförtner
given-names: Marvin
orcid: "https://orcid.org/0000-0002-9005-2984"
- family-names: Schmidt
given-names: Jonathan
- family-names: Bosch
given-names: Nathanael
- family-names: Effenberger
given-names: Nina
- family-names: Zenn
given-names: Johannes
- family-names: Gessner
given-names: Alexandra
- family-names: Karvonen
given-names: Toni
orcid: "https://orcid.org/0000-0002-5984-7295"
- family-names: Briol
given-names: François-Xavier
orcid: "https://orcid.org/0000-0002-0181-2559"
- family-names: Mahsereci
given-names: Maren
- family-names: Hennig
given-names: Philipp
year: 2021
url: "https://arxiv.org/abs/2112.02100"
identifiers:
- type: other
value: "arXiv:2112.02100"
description: The ArXiv preprint of the paper
GitHub Events
Total
- Watch event: 20
- Delete event: 1
- Issue comment event: 2
- Pull request event: 1
- Fork event: 4
- Create event: 1
Last Year
- Watch event: 20
- Delete event: 1
- Issue comment event: 2
- Pull request event: 1
- Fork event: 4
- Create event: 1
Dependencies
- actions/checkout v2 composite
- actions/setup-python v2 composite
- codecov/codecov-action v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- pip
- python >=3.8
- asv >=0.5,<0.6
- tox >=3.18,<5 development
- Jinja2 <3.1
- ipython <8.11.0
- jupyter *
- matplotlib *
- nbsphinx >=0.8.6,<0.8.7
- pytest *
- Pygments >=2.6.1
- myst-parser <0.17.0
- pydata-sphinx-theme >=0.6.0,<0.8.1
- sphinx >=3.0,<5.4
- sphinx-automodapi *
- sphinx-gallery *
- black >=22.1,<23
- isort >=5.10,<6
- pylint ==2.9.
- numpy >=1.20
- numpy >=1.21.3; python_version>='3.10'
- scipy >=1.4
- scipy >=1.8.0; python_version>='3.10'
- pytest >=4.6,<8.0.0 test
- pytest >=6.1.1,<6.2.0 test
- pytest-cases >=3.6.9,<4.0.0 test
- pytest-cov * test