rcpchgrowth

A python package to produce calculations for all growth issues

https://github.com/rcpch/rcpchgrowth-python

Science Score: 52.0%

This score indicates how likely this project is to be science-related based on various indicators:

✓
CITATION.cff file
Found CITATION.cff file
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codemeta.json file
Found codemeta.json file
✓
.zenodo.json file
Found .zenodo.json file
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DOI references
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Academic publication links
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Academic email domains
✓
Institutional organization owner
Organization rcpch has institutional domain (rcpch.ac.uk)
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (12.7%) to scientific vocabulary

Keywords

growth python rcpch

Last synced: 6 months ago · JSON representation ·

Repository

A python package to produce calculations for all growth issues

Basic Info

Host: GitHub
Owner: rcpch
License: agpl-3.0
Language: Python
Default Branch: live
Size: 6.94 MB

Statistics

Stars: 7
Watchers: 6
Forks: 6
Open Issues: 12
Releases: 0

Topics

growth python rcpch

Created almost 5 years ago · Last pushed 6 months ago

Metadata Files

Readme License Citation

RCPCHGrowth Python library

Calculations for children's measurements against UK and international growth references.

Please go to https://growth.rcpch.ac.uk/products/python-library/ for full documentation.

Issues can be raised here https://github.com/rcpch/rcpchgrowth-python/issues

Installation

Docker

If you want to avoid setting up docker environments, there are shortcut scripts the create a dockerized environment with RCPCHGrowth already installed.

This will generate a container which will launch some Jupyter notebooks in a browser and allow local dev ( with hot reload).

bash s/up

Minimal installation (without docker) assuming you have a python virtual env setup

bash pip install rcpchgrowth

With notebook & package dependencies:

bash pip install "rcpchgrowth[notebook]"

The notebook extra currently pulls in: pandas, matplotlib, jupyterlab, ipykernel.

Data handling / privacy

Data handling & privacy
Never commit identifiable patient data.
• Keep raw identifiable data outside version control (secure, access‑controlled).
• De‑identify before analysis (remove names, NHS numbers, full DOB; date‑shift if required).
• Do not push raw exports to forks, PRs or gists.
• Use ResearchTemplate.ipynb for generating de‑identified derived outputs.
If in doubt, stop and seek local information governance guidance.

Contributing

See issues list and please open discussions before large changes.

Owner

Name: The Royal College of Paediatrics and Child Health
Login: rcpch
Kind: organization
Email: it.support@rcpch.ac.uk
Location: 5-11 Theobald's Road, London WC1X 8SH

Website: https://rcpch.ac.uk
Twitter: RCPCHtweets
Repositories: 13
Profile: https://github.com/rcpch

Best Practice As Code, from the RCPCH

Citation (CITATION.cff)

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
  - family-names: "Chapman"
    given-names: "Simon"
    orcid: "https://orcid.org/0000-0001-9897-2040"
  - family-names: "Baw"
    given-names: "Marcus"
    orcid: "https://orcid.org/0000-0003-4369-8659"
  - family-names: "Cole"
    given-names: "Tim"
    orcid: "https://orcid.org/0000-0001-5711-8200"
title: "rcpchgrowth"
version: 3.1.17
doi: 10.5281/zenodo.6301089
date-released: 2022-05-14
url: "https://github.com/rcpch/rcpchgrowth-python"

GitHub Events

Total

Create event: 45
Release event: 17
Issues event: 24
Watch event: 2
Delete event: 24
Issue comment event: 18
Push event: 137
Pull request review event: 3
Pull request event: 49
Fork event: 1

Last Year

Create event: 45
Release event: 17
Issues event: 24
Watch event: 2
Delete event: 24
Issue comment event: 18
Push event: 137
Pull request review event: 3
Pull request event: 49
Fork event: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time

Total issues: 2
Total pull requests: 12
Average time to close issues: about 15 hours
Average time to close pull requests: about 8 hours
Total issue authors: 1
Total pull request authors: 1
Average comments per issue: 0.0
Average comments per pull request: 0.0
Merged pull requests: 8
Bot issues: 0
Bot pull requests: 0

Past Year

Issues: 2
Pull requests: 12
Average time to close issues: about 15 hours
Average time to close pull requests: about 8 hours
Issue authors: 1
Pull request authors: 1
Average comments per issue: 0.0
Average comments per pull request: 0.0
Merged pull requests: 8
Bot issues: 0
Bot pull requests: 0

View more stats

Top Authors

Issue Authors

eatyourpeas (16)
ryanlewis94 (1)
pacharanero (1)
rscottweekly (1)

Pull Request Authors

eatyourpeas (29)
rscottweekly (1)
mbarton (1)
pacharanero (1)

Top Labels

Issue Labels

bug (7) enhancement (4) question (2) invalid (2)

Pull Request Labels

enhancement (6) bug (1)

Packages

Total packages: 1
Total downloads:
- pypi 768 last-month

Total dependent packages: 0
Total dependent repositories: 2
Total versions: 86
Total maintainers: 1

pypi.org: rcpchgrowth

SDS and Centile calculations for UK Growth Data

Homepage: https://github.com/rcpch/rcpchgrowth-python
Documentation: https://growth.rcpch.ac.uk/products/python-library/
License: agpl-3.0
Latest release: 4.4.0
published 6 months ago

Versions: 86
Dependent Packages: 0
Dependent Repositories: 2
Downloads: 768 Last month

Rankings

Dependent packages count: 10.1%

Forks count: 11.4%

Dependent repos count: 11.5%

Average: 12.3%

Downloads: 12.7%

Stargazers count: 15.6%

Maintainers (1)

rcpch