PhyloCoalSimulations - v1.0.0

PhyloCoalSimulations v1.0.0

Diff since v0.1.3

first stable release, compatible with PhyloNetworks v1.0.0.

new features: geneedgemapping!, populationmappedto (now exported)

Merged pull requests: - links cecileane / crsl4 -> juliaphylo (#13) (@cecileane) - Edge encoding (#15) (@jjustison) - Bump actions/checkout from 2 to 4 (#19) (@dependabot[bot])

- Julia
Published by github-actions[bot] about 1 year ago

PhyloCoalSimulations - v0.1.3

PhyloCoalSimulations v0.1.3

Diff since v0.1.2

Merged pull requests: - simulator can take user-defined random number generator (#12) (@cecileane)

Closed issues: - Parenthetical format in simulated gene trees (#11)

- Julia
Published by github-actions[bot] almost 2 years ago

PhyloCoalSimulations - v0.1.2

PhyloCoalSimulations v0.1.2

• depends on PhyloNetworks v0.16 for accessors (e.g. getchildedge).
• breaking change (on internal methods): hassinglechild and singlechildedge were removed from here.
• better doc, about correlated inheritance model in particular

Diff since v0.1.1

Merged pull requests: - v0.1.2; bump compat for PhyloNetworks to v0.16 (#10) (@cecileane)

- Julia
Published by github-actions[bot] almost 3 years ago

PhyloCoalSimulations - v0.1.1

PhyloCoalSimulations v0.1.1

new features:

option for correlated inheritanced: correlated parents for multiple lineages coming to a hybrid iterator over degree-2 nodes mapping the gene tree into the species network

bug fixes:

check for non-missing edge lengths

- Julia
Published by cecileane about 3 years ago

PhyloCoalSimulations - v0.1.0

PhyloCoalSimulations v0.1.0

Merged pull requests: - improvements to documentation (#3) (@cecileane) - Jf review (#4) (@fogg-uw) - Julia 1 8 (#5) (@fogg-uw)

- Julia
Published by github-actions[bot] over 3 years ago