socialgene
Python package for creating and interacting with graph databases of protein domains and their genome coordinates
Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (11.0%) to scientific vocabulary
Repository
Python package for creating and interacting with graph databases of protein domains and their genome coordinates
Basic Info
- Host: GitHub
- Owner: socialgene
- License: mit
- Language: Python
- Default Branch: main
- Homepage: https://socialgene.github.io
- Size: 20.5 MB
Statistics
- Stars: 6
- Watchers: 1
- Forks: 1
- Open Issues: 2
- Releases: 38
Metadata Files
README.md
Note: All releases may intorduce breaking changes until the release of v1.0.0
Status
Github
PyPI
https://pypi.org/project/socialgene/
Contributing
Please see https://github.com/socialgene/sgpy/blob/main/CONTRIBUTING.md
Documentation
Both user and developer documentation can be found at: https://socialgene.github.io
Installation with pip
bash
pip install socialgene
Create conda environment and install python package inside
bash
git clone https://github.com/socialgene/sgpy.git
cd sgpy
make create_conda
Build Python package from source
bash
git clone https://github.com/socialgene/sgpy.git
cd sgpy
make install_python
Run all tests
bash
git clone https://github.com/socialgene/sgpy.git
cd sgpy
make run_ci
Classes:
Modules
Owner
- Name: socialgene
- Login: socialgene
- Kind: organization
- Repositories: 3
- Profile: https://github.com/socialgene
Citation (CITATION.cff)
cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Clark"
given-names: "Chase M"
orcid: "https://orcid.org/ 0000-0001-6439-9397 "
title: "socialgene"
version: 0.1.0
date-released: 2022-02-22
url: "https://github.com/socialgene"
GitHub Events
Total
- Create event: 5
- Issues event: 5
- Release event: 4
- Watch event: 3
- Delete event: 2
- Issue comment event: 8
- Push event: 21
- Pull request event: 12
- Fork event: 1
Last Year
- Create event: 5
- Issues event: 5
- Release event: 4
- Watch event: 3
- Delete event: 2
- Issue comment event: 8
- Push event: 21
- Pull request event: 12
- Fork event: 1
Packages
- Total packages: 1
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Total downloads:
- pypi 124 last-month
- Total docker downloads: 445
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 37
- Total maintainers: 1
pypi.org: socialgene
Creating and interacting with graph databases of protein domains and their genome coordinates
- Documentation: https://socialgene.readthedocs.io/
- License: MIT
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Latest release: 2.0.1
published 7 months ago