Science Score: 59.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
10 of 54 committers (18.5%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (13.1%) to scientific vocabulary
Keywords
Repository
The Integrative Modeling Platform
Basic Info
- Host: GitHub
- Owner: salilab
- License: gpl-3.0
- Language: C++
- Default Branch: develop
- Homepage: https://integrativemodeling.org
- Size: 224 MB
Statistics
- Stars: 77
- Watchers: 40
- Forks: 31
- Open Issues: 64
- Releases: 25
Topics
Metadata Files
README.md
For full installation and usage instructions, see the documentation.
Building IMP from source code
To build IMP source found in path/to/imp-source and install it in
path_to_install do:
mkdir build && cd buildcmake path/to/imp-source -DCMAKE_INSTALL_PREFIX=path_to_installmake -j4make install
See the installation instructions in the manual for more details (in particular this covers the necessary prerequisites you'll need before running cmake).
Run ccmake to see more variables that can be used to customize your build and
install.
To run IMP without installing, build IMP and then use setup_environment.sh to
set the required environment variables. For example, to run ligand_score, do
./setup_environment.sh ligand_score arguments..., or
./setup_environment.sh $SHELL and then ligand_score arguments... in the
new shell.
Copyright and License information
IMP is Copyright 2007-2025 IMP Inventors. The IMP Inventors are Andrej Sali, Ben Webb, Daniel Russel, Keren Lasker, Dina Schneidman, Javier Velzquez-Muriel, Friedrich Frster, Elina Tjioe, Hao Fan, Seung Joong Kim, Yannick Spill, Riccardo Pellarin.
IMP is largely available under the GNU Lesser GPL; see the file COPYING.LGPL for the full text of this license. Some IMP modules are available under the GNU GPL (see the file COPYING.GPL). Please refer to the documentation for more detail.
Files and folders structure
When you build IMP, the lib directory contains Python modules (both pure
Python, in the IMP subdirectory, and C++ extensions, as _IMP_foo.so
in the top-level directory) and the IMP C++ libraries (as libimp_foo.so
in the top-level directory). Rationale: Windows searches for C++ dynamic
libraries in the same directory as C++ Python extensions.
The include directory contains all public header files under the IMP
subdirectory. Modules are in named subdirectories under that.
The swig directory contains all SWIG interface (.i) files used to build
the Python interface.
Owner
- Name: Sali Lab
- Login: salilab
- Kind: organization
- Location: San Francisco, CA
- Website: https://salilab.org
- Twitter: salilab_ucsf
- Repositories: 76
- Profile: https://github.com/salilab
Laboratory of Andrej Sali at the University of California San Francisco
GitHub Events
Total
- Create event: 4
- Release event: 1
- Issues event: 3
- Watch event: 3
- Delete event: 3
- Issue comment event: 5
- Push event: 111
- Gollum event: 2
- Fork event: 1
Last Year
- Create event: 4
- Release event: 1
- Issues event: 3
- Watch event: 3
- Delete event: 3
- Issue comment event: 5
- Push event: 111
- Gollum event: 2
- Fork event: 1
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| drussel@SALILAB.ORG | d****l@S****G@e****b | 10,334 |
| Ben Webb | b****n@s****g | 5,455 |
| ben@SALILAB.ORG | b****n@S****G@e****b | 3,287 |
| Daniel Russel | d****l@g****m | 1,282 |
| kerenl@SALILAB.ORG | k****l@S****G@e****b | 952 |
| Massimiliano Bonomi | m****i@s****g | 545 |
| yannick@SALILAB.ORG | y****k@S****G@e****b | 446 |
| javi@SALILAB.ORG | j****i@S****G@e****b | 322 |
| Barak Raveh | b****k@s****g | 276 |
| dina@SALILAB.ORG | d****a@S****G@e****b | 178 |
| Dina Schneidman | d****a@g****m | 173 |
| cgreenberg | c****n@s****g | 165 |
| Seth Axen | s****n@g****m | 152 |
| Shruthi Viswanath | s****i@s****g | 140 |
| etjioe@SALILAB.ORG | e****e@S****G@e****b | 116 |
| Yannick Spill | y****k@s****g | 83 |
| barak@SALILAB.ORG | b****k@S****G@e****b | 55 |
| Barak Raveh | b****h@g****m | 51 |
| Riccardo Pellarin | p****o@g****m | 44 |
| Ilan E Chemmama | i****a@u****u | 40 |
| sjkim@SALILAB.ORG | s****m@S****G@e****b | 33 |
| Barak Raveh | b****h@m****l | 30 |
| saltzberg | s****g | 29 |
| Daniel Saltzberg | s****g@s****g | 28 |
| ben | b****n@e****b | 27 |
| Yannick | y****l@p****r | 26 |
| cgreen@SALILAB.ORG | c****n@S****G@e****b | 24 |
| pellarin@SALILAB.ORG | p****n@S****G@e****b | 21 |
| procyon777@gmail.com | p****7@g****m | 18 |
| dina | d****a@c****l | 17 |
| and 24 more... | ||
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 90
- Total pull requests: 12
- Average time to close issues: about 3 years
- Average time to close pull requests: 10 days
- Total issue authors: 27
- Total pull request authors: 8
- Average comments per issue: 1.82
- Average comments per pull request: 2.75
- Merged pull requests: 9
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 0
- Average comments per issue: 0.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- benmwebb (31)
- drussel (16)
- sethaxen (8)
- Pellarin (7)
- ichem001 (3)
- barakr (3)
- saltzberg (2)
- cgreenberg (2)
- es15326 (2)
- tpeulen (2)
- dsclassen (2)
- yannickspill (2)
- shiyi-pan (1)
- huge200890 (1)
- tanmoy7989 (1)
Pull Request Authors
- alatham13 (5)
- sethaxen (3)
- tanmoy7989 (3)
- saltzberg (1)
- barakr (1)
- iecheverria (1)
- ichem001 (1)
- Stochastic13 (1)
- benmwebb (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
- Total downloads: unknown
- Total dependent packages: 0
- Total dependent repositories: 2
- Total versions: 3
conda-forge.org: imp
IMP's broad goal is to contribute to a comprehensive structural characterization of biomolecules ranging in size and complexity from small peptides to large macromolecular assemblies, by integrating data from diverse biochemical and biophysical experiments. IMP provides an open source C++ and Python toolbox for solving complex modeling problems, and a number of applications for tackling some common problems in a user-friendly way. IMP can also be used from the [Chimera](https://www.cgl.ucsf.edu/chimera/) molecular modeling system, or via one of several web applications. See [the IMP website](https://integrativemodeling.org/) for more details.
- Homepage: https://integrativemodeling.org
- License: GPL-3.0-or-later
-
Latest release: 2.17.0
published over 3 years ago
Rankings
Dependencies
- actions/checkout v2 composite
- actions/checkout v2 composite
- actions/setup-python v2 composite
- msgpack *