yaeos
Thermodynamic Equations of State, Fortran library with both automatic and anallytical derivation capabilities
Science Score: 62.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
-
○Academic publication links
-
✓Committers with academic emails
2 of 3 committers (66.7%) from academic institutions -
✓Institutional organization owner
Organization ipqa-research has institutional domain (ipqa.unc.edu.ar) -
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (14.5%) to scientific vocabulary
Keywords
Keywords from Contributors
Repository
Thermodynamic Equations of State, Fortran library with both automatic and anallytical derivation capabilities
Basic Info
- Host: GitHub
- Owner: ipqa-research
- License: mpl-2.0
- Language: Fortran
- Default Branch: main
- Homepage: https://ipqa-research.github.io/yaeos/
- Size: 50.6 MB
Statistics
- Stars: 33
- Watchers: 3
- Forks: 6
- Open Issues: 15
- Releases: 19
Topics
Metadata Files
README.md
There are multiple open source equations of state libraries, like:
- Clapeyron
julia - FeOs
rustwithPythonbindings - teqp
C++withPythonbindings - thermo
python - thermopack
FortranwithPythonbindings - CoolProp
C++withPythonbindings
Here we are presenting yet another one, that tackles the same problem just, in another way. Mostly exploiting the readability and extensibility of Modern Fortran for scientists to have an easy way to implement new thermodynamic models without dealing with lower-level languages but still getting decent performance. And also this framework provides the possibility of using analytically obtained derivatives, so both options are easily available.
We focus mainly on that the addition of a new thermodynamic model as easily as possible. Also providing our models too!
Documentation
The latest API documentation for the main branch can be found:
- Fortran API documentation
- Python API documentation
The Fortran API documentation can also be generated by processing the source files with FORD. On the other hand, the Python API documentation can be generated by processing the source files with Sphinx.
Available models
- Multiparametric
- GERG2008
- CubicEoS
- SoaveRedlichKwong
- PengRobinson76
- PengRobinson78
- RKPR
- PSRK
- MixingRules:
- QMR
- QMRTD
- MHV1
- HV
- ExcessGibbs models
- NRTL
- NRTL-HV
- UNIFAC VLE
- UNIFAC Dortmund
Available properties
- Bulk Properties
- Volume(n, P, T)
- Pressure(n, V, T)
- Residual Properties
- H^R(n, V, T)
- S^R(n, V, T)
- G^R(n, V, T)
- Cv^R(n, V, T)
- Cp^R(n, V, T)
- Phase-Equilibria
- FlashPT, FlashVT
- Saturation points (bubble, dew and liquid-liquid)
- PT Phase Envelope (isopleths)
- Px Phase Envelope (isotherms)
- Tx Phase Envelope (isobars)
Developers
This library is currently maintained by the research group of Prof. Martín Cismondi-Duarte at IPQA (UNC-CONICET)
Versioning
We use Semantic Versioning to define our version numbers.
A little taste of yaeos
A lot of users get the bad picture of Fortran being old and archaic since most
of the codes they've seen are written in ancient F77.
```fortran use yaeos, only: PengRobinson76, ArModel
integer, parameter :: n=2 ! Number of components real(8) :: V, T, P, dPdN(n) ! variables to calculate class(ArModel), allocatable :: model ! Model
real(pr) :: z(n), tc(n), pc(n), w(n), kij(n, n), lij(n, n)
z = [0.3, 0.7] tc = [190., 310.] pc = [14., 30.] w = [0.001, 0.03] kij = reshape([0., 0.1, 0.1, 0.], [n,n]) lij = kij / 2
model = PengRobinson76(tc, pc, w, kij, lij)
V = 1 T = 150
call model%pressure(z, V, T, P) print *, P
! Obtain derivatives adding them as optional arguments! call model%pressure(model, z, V, T, P, dPdN=dPdN) print *, dPdN ```
Examples of code with simple applications showing the capabilities of yaeos
can be found at example/tutorials. Each example can be run
with:
bash
fpm run --example <example name here>
Not providing any examples will show all the possible examples that can be run.
How to install/run it
Dependencies
yaeos needs to have both lapack and nlopt libraries on your system.
Debian/Ubuntu-like
bash
sudo apt install libnlopt-dev libblas-dev liblapack-dev
Installing yaeos
yaeos is intended to use as a fpm package. fpm
is the Fortran Package Manager, which automates the compilation and running
process of Fortran libraries/programs.
You can either:
- Generate a new project that uses
yaeosas a dependency with:
bash fpm new my_projectIn the
fpm.tomlfile add:
toml [dependencies] yaeos = {git="https://github.com/ipqa-research/yaeos"}
- Clone this repository and just modify the executables in the
appdirectory
bash git clone https://github.com/ipqa-research/yaeos cd yaeos fpm run
Developing with vscode
If your intention is either to develop for yaeos or to explore in more detail
the library with debugging. We provide some predefined defuaults to work with
vscode. You can add them to the cloned repository by running:
bash
git clone https://github.com/ipqa-research/vscode-fortran .vscode
From the project main directory
Available examples
In this repository we provide a series of examples of the different things that
can be calculated with yaeos. The source codes for the examples can be seen
at the example/tutorials directory.
All the examples can be run with
bash
fpm run --example <example_name_here>
Including new models with Automatic Differentiation.
Hyperdual Numbers autodiff
We are using the hyperdual module developed by
Philipp Rehner
and Gernot Bauer
The automatic differentiation API isn't fully optimized yet so performance is much slower than it should be.
A complete implementation of the PR76 Equation of State can me found in
example/adiff/adiff_pr76.f90. Or in the documentation pages.
Tapenade-based autodiff
It is also possible to differentiate with tapenade. Examples can be seen
in the documentation pages or in The tools directory
Owner
- Name: IPQA research
- Login: ipqa-research
- Kind: organization
- Location: Córdoba, Argentina
- Website: https://ipqa.unc.edu.ar/
- Twitter: IPQACONICET
- Repositories: 1
- Profile: https://github.com/ipqa-research
Citation (CITATION.cff)
# This CITATION.cff file was generated with cffinit.
# Visit https://bit.ly/cffinit to generate yours today!
cff-version: 1.2.0
title: yaeos
message: >-
If you use this software, please cite it using the
metadata from this file.
type: software
authors:
- given-names: Federico Ezequiel
family-names: Benelli
email: federico.benelli@unc.edu.ar
orcid: 'https://orcid.org/0009-0002-0072-815X'
- given-names: Salvador Eduardo
family-names: Brandolín
email: salvador.brandolin@unc.edu.ar
orcid: 'https://orcid.org/0000-0002-8255-6322'
- given-names: Martín
family-names: Cismondi-Duarte
email: martin.cismondi@unc.edu.ar
orcid: 'https://orcid.org/0000-0002-9349-8594'
identifiers:
- type: url
value: 'https://github.com/ipqa-research/yaeos'
description: Link to GitHub repository
repository-code: 'https://github.com/ipqa-research/yaeos'
url: 'https://ipqa-research.github.io/yaeos'
keywords:
- equation of state
- thermodynamics
- Fortran
- Python
- Phase Equilibria
- Phase Diagrams
license: MPL-2.0
GitHub Events
Total
- Create event: 26
- Issues event: 1
- Release event: 6
- Watch event: 5
- Delete event: 14
- Issue comment event: 28
- Push event: 375
- Pull request review comment event: 5
- Pull request review event: 14
- Pull request event: 53
- Fork event: 2
Last Year
- Create event: 26
- Issues event: 1
- Release event: 6
- Watch event: 5
- Delete event: 14
- Issue comment event: 28
- Push event: 375
- Pull request review comment event: 5
- Pull request review event: 14
- Pull request event: 53
- Fork event: 2
Committers
Last synced: 8 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| fedebenelli | f****i@o****m | 1,094 |
| salvador | s****n@m****r | 154 |
| Federico E. Benelli | f****i@u****r | 53 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 16
- Total pull requests: 122
- Average time to close issues: 4 months
- Average time to close pull requests: 8 days
- Total issue authors: 2
- Total pull request authors: 3
- Average comments per issue: 1.0
- Average comments per pull request: 0.86
- Merged pull requests: 100
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 57
- Average time to close issues: N/A
- Average time to close pull requests: 16 days
- Issue authors: 1
- Pull request authors: 3
- Average comments per issue: 0.0
- Average comments per pull request: 0.98
- Merged pull requests: 40
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- fedebenelli (13)
- SalvadorBrandolin (5)
Pull Request Authors
- fedebenelli (153)
- SalvadorBrandolin (46)
- Copilot (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- pypi 165 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 12
- Total maintainers: 1
pypi.org: yaeos
Thermodynamic modelling with Equation of State
- Documentation: https://yaeos.readthedocs.io/
- License: mpl-2.0
-
Latest release: 4.2.1
published 7 months ago
Rankings
Maintainers (1)
Dependencies
- actions/checkout v2 composite
- actions/setup-python v1 composite
- fortran-lang/setup-fpm v4 composite
- ts-graphviz/setup-graphviz v1 composite
- JamesIves/github-pages-deploy-action 4.1.0 composite
- actions/checkout v3 composite
- actions/upload-artifact v2 composite
- technote-space/broken-link-checker-action v1 composite