turc_index
Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
-
○Academic publication links
-
○Academic email domains
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (10.7%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: lcsc
- License: gpl-3.0
- Language: R
- Default Branch: master
- Size: 287 KB
Statistics
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
TURC Index Project
Overview
The TURC Index Project provides a tool for calculating the TURC index using ERA5-Land climate data.
Project Structure
plaintext
TURC-index/
├── config/
│ └── input_awc_source.txt
├── environment.yml
├── outputs/
│ └── CA_1980_2023.nc
├── preprocessing/
│ ├── AWC_data/
│ │ ├── awc.nc
│ │ ├── era5_land_data.nc
│ │ └── grid_era5_land_standar.nc
│ └── ERA5_land_data/
│ ├── data/
│ └── update_data/
├── scripts/
│ ├── functions.R
│ ├── preprocessing/
│ │ └── generate_awc.R
│ ├── processing/
│ │ ├── download_era5_data.py
│ │ ├── generate_turc_db.sh
│ │ └── main_generate.R
│ └── update/
│ ├── download_new_year.py
│ ├── main_update.R
│ └── update_turc_db.sh
Instructions
Prerequisites
To execute the processes, you must have Docker installed on your system. Follow the official installation instructions for your operating system:
- Linux (Docker Engine): Docker Engine Installation
- Windows & macOS (Docker Desktop): Docker Desktop Installation
Configure CDS API
Ensure you have an account on the Copernicus Climate Data Store. Configure the API key by creating a .cdsapirc file and save it in the project root (turc_index folder) to ensure accessibility from the Docker container.
.cdsapirc content:
bash
url: https://cds.climate.copernicus.eu/api
key: <your-api-key>
Replace <your-api-key> with your Copernicus credentials.
Generate the Database
- Clone the repository:
bash
git clone <REPOSITORY_URL>
cd turc_index
- Build the Docker image:
bash
docker buildx build . --pull -t turc-index
- Run the Docker container:
bash
docker container run --device=/dev/ppp --privileged --name turc-index_calc --cap-add=NET_ADMIN -m 8G --cpus="2" --rm -it -v /path/to/local/repo:/mnt turc-index
Important: Replace /path/to/local/repo
Ensure that you replace /path/to/local/repo with the absolute path where you cloned this repository. Examples:
- Linux/macOS:
bash docker container run --device=/dev/ppp --privileged --name turc-index_calc --cap-add=NET_ADMIN -m 8G --cpus="2" --rm -it -v /home/user/projects/turc_index:/mnt turc-index - Windows (Git Bash, WSL, or PowerShell):
bash docker container run --device=/dev/ppp --privileged --name turc-index_calc --cap-add=NET_ADMIN -m 8G --cpus="2" --rm -it -v /c/Users/user/projects/turc_index:/mnt turc-index
Ensure Execution Permissions
Before running the scripts, make sure they have execution permissions:
bash
chmod +x scripts/processing/generate_turc_db.sh scripts/update/update_turc_db.sh
Running the Docker Container
Once the container is running, you will be inside its interactive shell. From there, you can execute the scripts for creating and updating the database as described below. To exit the container and return to your system's prompt, type:
bash
exit
or press Ctrl+D.
Create the Turc Index Database
- Run the script to generate the database:
bash
cd /mnt/scripts/processing
bash generate_turc_db.sh start_year end_year
Example:
bash
bash generate_turc_db.sh 1980 2023
- If you do not provide the start and end years in the command line, you will be prompted to enter them during execution.
- Ensure the end year is complete with data from January to December.
- Run the update script:
bash
cd /mnt/scripts/update
bash update_turc_db.sh year database_name_to_update
Example:
bash
bash update_turc_db.sh 2024 CA_1980_2023.nc
- If you do not provide the new year and the database name in the command line, you will be prompted to enter them during execution.
- Ensure the new year is complete with data from January to December.
Contributions
Contributions are welcome. Please open an issue or submit a pull request to discuss any changes.
How to Cite
If you use this code, please cite the repository as:
Franquesa, M., Reig, F. (2025). Turc Index Database. GitHub repository. Available at: https://github.com/lcsc/turc_index
BibTeX entry:
bibtex
@misc{franquesa2025turcindex,
author = {Franquesa, M. and Reig, F.},
title = {Turc Index Database: Global calculations based on ERA5-Land data},
year = {2025},
url = {https://github.com/lcsc/turc_index},
note = {Version 1.0. Accessed: YYYY-MM-DD}
}
License
This project is licensed under the GNU General Public License v3.0 (GPL-3.0).
You may copy, distribute, and modify the software as long as you track changes and dates in source files. Any modifications to this project must also be licensed under the GPL-3.0.
A copy of the GNU General Public License is included in this repository. See the LICENSE file for more details.
For further information, visit GNU GPL-3.0.
Licensing Considerations
The Turc Index Calculation relies on ERA5-Land data from the Copernicus Climate Data Store. Users must comply with Copernicus licensing terms. More details: Copernicus License.
Owner
- Name: Climatology and Climate Services Laboratory
- Login: lcsc
- Kind: organization
- Email: lcsc@csic.es
- Location: Zaragoza
- Website: https://lcsc.csic.es
- Repositories: 1
- Profile: https://github.com/lcsc
The LCSC conducts research in the fields of climatology and global change, focusing on the development of analysis tools and climate services.
Citation (CITATION.cff)
cff-version: 1.2.0
message: "If you use this repository in your research, please cite it as below."
title: "Turc Index Database"
authors:
- family-names: "Franquesa"
given-names: "Magí"
orcid: "0000-0003-3101-0394"
- family-names: "Reig"
given-names: "Fergus"
orcid: "0000-0002-9482-1170"
version: "1.0.0"
date-released: "2025-01-07"
doi: "10.xxxx/zenodo.xxxx"
url: "https://github.com/lcsc/turc_index"
GitHub Events
Total
- Push event: 2
- Create event: 4
Last Year
- Push event: 2
- Create event: 4
Dependencies
- ubuntu 24.04 build