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galaxy

https://github.com/bio-agents/galaxy

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic links in README
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Unable to calculate vocabulary similarity
Last synced: 10 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: bio-agents
  • License: other
  • Language: Python
  • Default Branch: dev
  • Size: 80.7 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created almost 2 years ago · Last pushed almost 2 years ago
Metadata Files
Readme Contributing License Code of conduct Citation

Owner

  • Name: BioAgents
  • Login: bio-agents
  • Kind: organization
  • Email: joy6677@qq.com

GitHub Events

Total
Last Year

Dependencies

client/bower.json bower
client/Dockerfile docker
  • digitallyseamless/nodejs-bower-grunt latest build
lib/galaxy/web/proxy/js/Dockerfile docker
  • node 0.11.13 build
test/docker/base/Dockerfile docker
  • agentshed/requirements latest build
client/package-lock.json npm
client/package.json npm
config/plugins/visualizations/charts/package.json npm
config/plugins/visualizations/scatterplot/package.json npm
lib/galaxy/web/proxy/js/package-lock.json npm
lib/galaxy/web/proxy/js/package.json npm
test/qunit/package-lock.json npm
test/qunit/package.json npm
lib/galaxy/dependencies/conditional-requirements.txt pypi
  • MySQL-python *
  • Pygments ==2.0.2
  • WebError ==0.10.3
  • drmaa *
  • fluent-logger *
  • importlib ==1.0.3
  • ordereddict ==1.1
  • pbs_python *
  • psycopg2 ==2.6.1
  • python-openid *
  • raven *
lib/galaxy/dependencies/dev-requirements.txt pypi
  • NoseHTML * development
  • mock * development
  • nose * development
  • twill ==0.9.1 development
lib/galaxy/dependencies/pinned-hashed-requirements.txt pypi
  • Babel ==2.0
  • Beaker ==1.7.0
  • Cheetah ==2.4.4
  • Fabric ==1.10.2
  • Mako ==1.0.2
  • Markdown ==2.6.3
  • MarkupSafe ==0.23
  • Parsley ==1.3
  • Paste ==2.0.2
  • PasteDeploy ==1.5.2
  • PyYAML ==3.11
  • Routes ==2.2
  • SQLAlchemy ==1.0.8
  • SVGFig ==1.1.6
  • Tempita ==0.5.3dev
  • WebHelpers ==1.3
  • WebOb ==1.4.1
  • Whoosh ==2.4.1
  • amqp ==1.4.8
  • anyjson ==0.3.3
  • bioblend ==0.6.1
  • boto ==2.38.0
  • bx-python ==0.7.3
  • decorator ==4.0.2
  • docutils ==0.12
  • ecdsa ==0.13
  • kombu ==3.0.30
  • mercurial ==3.4.2
  • nose ==1.3.7
  • numpy ==1.9.2
  • paramiko ==1.15.2
  • pbr ==1.8.0
  • pycrypto ==2.6.1
  • pysam ==0.8.3
  • pytz ==2015.4
  • repoze.lru ==0.6
  • requests ==2.8.1
  • requests-agentbelt ==0.4.0
  • six ==1.9.0
  • sqlalchemy-migrate ==0.10.0
  • sqlparse ==0.1.16
  • wchartype ==0.1
lib/galaxy/dependencies/pinned-requirements.txt pypi
  • Babel ==2.0
  • Beaker ==1.7.0
  • Cheetah ==2.4.4
  • Fabric ==1.10.2
  • Mako ==1.0.2
  • Markdown ==2.6.3
  • MarkupSafe ==0.23
  • Parsley ==1.3
  • Paste ==2.0.2
  • PasteDeploy ==1.5.2
  • PyYAML ==3.11
  • Routes ==2.2
  • SQLAlchemy ==1.0.8
  • SVGFig ==1.1.6
  • Tempita ==0.5.3dev
  • WebHelpers ==1.3
  • WebOb ==1.4.1
  • Whoosh ==2.4.1
  • amqp ==1.4.8
  • anyjson ==0.3.3
  • bioblend ==0.6.1
  • boto ==2.38.0
  • bx-python ==0.7.3
  • decorator ==4.0.2
  • docutils ==0.12
  • ecdsa ==0.13
  • kombu ==3.0.30
  • mercurial ==3.4.2
  • nose ==1.3.7
  • numpy ==1.9.2
  • paramiko ==1.15.2
  • pbr ==1.8.0
  • pycrypto ==2.6.1
  • pysam ==0.8.3
  • pytz ==2015.4
  • repoze.lru ==0.6
  • requests ==2.8.1
  • requests-agentbelt ==0.4.0
  • six ==1.9.0
  • sqlalchemy-migrate ==0.10.0
  • sqlparse ==0.1.16
  • wchartype ==0.1
lib/galaxy/dependencies/requirements.txt pypi
  • Babel *
  • Beaker *
  • Cheetah *
  • Fabric *
  • Mako *
  • MarkupSafe *
  • Parsley *
  • Paste *
  • PasteDeploy *
  • PyYAML *
  • Routes *
  • SQLAlchemy *
  • SVGFig *
  • Tempita *
  • WebHelpers *
  • WebOb *
  • Whoosh ==2.4.1
  • bioblend *
  • boto *
  • bx-python *
  • decorator *
  • docutils *
  • kombu *
  • mercurial <3.5
  • nose *
  • numpy *
  • pycrypto *
  • pysam ==0.8.3
  • pytz *
  • repoze.lru *
  • requests *
  • six *
  • sqlalchemy-migrate *
  • sqlparse *
  • wchartype *
requirements.txt pypi
  • Babel ==2.0
  • Beaker ==1.7.0
  • Cheetah ==2.4.4
  • Fabric ==1.10.2
  • Mako ==1.0.2
  • Markdown ==2.6.3
  • MarkupSafe ==0.23
  • Parsley ==1.3
  • Paste ==2.0.2
  • PasteDeploy ==1.5.2
  • PyYAML ==3.11
  • Routes ==2.2
  • SQLAlchemy ==1.0.8
  • SVGFig ==1.1.6
  • Tempita ==0.5.3dev
  • WebHelpers ==1.3
  • WebOb ==1.4.1
  • Whoosh ==2.4.1
  • amqp ==1.4.8
  • anyjson ==0.3.3
  • bioblend ==0.6.1
  • boto ==2.38.0
  • bx-python ==0.7.3
  • decorator ==4.0.2
  • docutils ==0.12
  • ecdsa ==0.13
  • kombu ==3.0.30
  • mercurial ==3.4.2
  • nose ==1.3.7
  • numpy ==1.9.2
  • paramiko ==1.15.2
  • pbr ==1.8.0
  • pycrypto ==2.6.1
  • pysam ==0.8.3
  • pytz ==2015.4
  • repoze.lru ==0.6
  • requests ==2.8.1
  • requests-agentbelt ==0.4.0
  • six ==1.9.0
  • sqlalchemy-migrate ==0.10.0
  • sqlparse ==0.1.16
  • wchartype ==0.1