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CausalInference

Causal inference, graphical models and structure learning in Julia

https://github.com/mschauer/causalinference.jl

Science Score: 77.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 3 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ✓
    Committers with academic emails
    1 of 17 committers (5.9%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (6.3%) to scientific vocabulary

Keywords

causal-inference julia

Keywords from Contributors

numerics pde matrix-exponential flux julialang bayesian-inference graphics integration interface programming-language
Last synced: 6 months ago · JSON representation ·

Repository

Causal inference, graphical models and structure learning in Julia

Basic Info
Statistics
  • Stars: 203
  • Watchers: 9
  • Forks: 25
  • Open Issues: 15
  • Releases: 35
Topics
causal-inference julia
Created over 8 years ago · Last pushed 6 months ago
Metadata Files
Readme Contributing License Citation

README.md

Latest DOI

CausalInference.jl

Julia package for causal inference and analysis, graphical models and structure learning.

This package contains code for the PC algorithm and the extended FCI algorithm, the score based greedy equivalence search (GES) algorithm, the Bayesian Causal Zig-Zag sampler and a function suite for adjustment set search.

See the documentation for implemented functionality and issue #1 (Roadmap/Contribution) for coordination of the development.

Example output of PC algorithm

Owner

  • Name: Moritz Schauer
  • Login: mschauer
  • Kind: user
  • Location: Gothenburg
  • Company: University of Gothenburg and Chalmers Technical University

Statistician, PhD

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Schauer"
  given-names: "Moritz"
  orcid: "http://orcid.org/0000-0003-3310-7915"
- family-names: "Keller"
  given-names: "Martin"
- family-names: "Wienöbst"
  given-names: "Marcel"  
title: "CausalInference.jl"
doi: 10.5281/zenodo.1005091
url: "https://github.com/mschauer/CausalInference.jl"

GitHub Events

Total
  • Create event: 10
  • Commit comment event: 7
  • Release event: 2
  • Issues event: 2
  • Watch event: 15
  • Delete event: 5
  • Issue comment event: 25
  • Push event: 36
  • Pull request review event: 3
  • Pull request review comment event: 1
  • Pull request event: 22
  • Fork event: 1
Last Year
  • Create event: 10
  • Commit comment event: 7
  • Release event: 2
  • Issues event: 2
  • Watch event: 15
  • Delete event: 5
  • Issue comment event: 25
  • Push event: 36
  • Pull request review event: 3
  • Pull request review comment event: 1
  • Pull request event: 22
  • Fork event: 1

Committers

Last synced: 9 months ago

All Time
  • Total Commits: 491
  • Total Committers: 17
  • Avg Commits per committer: 28.882
  • Development Distribution Score (DDS): 0.407
Past Year
  • Commits: 39
  • Committers: 7
  • Avg Commits per committer: 5.571
  • Development Distribution Score (DDS): 0.564
Top Committers
Name Email Commits
mschauer m****r@w****e 291
Martin Keller s****z@g****m 71
Marcel Wienöbst m****t@g****e 38
Marcel Wienöbst w****t@t****e 25
github-actions[bot] 4****] 19
JorgeLuizFranco j****o@g****m 17
J S 4****p 8
dependabot[bot] 4****] 5
Dilum Aluthge d****m@a****m 4
RobertGregg r****g@g****m 4
Richard Samuelson s****k@g****m 2
CompatHelper Julia c****y@j****g 2
Julia TagBot 5****t 1
Marcel Wienöbst m****8@g****e 1
Zachary Clement c****h@i****m 1
femtocleaner[bot] f****] 1
samurai-kant s****t@g****m 1
Committer Domains (Top 20 + Academic)
gmx.de: 2 julialang.org: 1 aluthge.com: 1 tcs.uni-luebeck.de: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 37
  • Total pull requests: 138
  • Average time to close issues: about 1 year
  • Average time to close pull requests: 18 days
  • Total issue authors: 15
  • Total pull request authors: 13
  • Average comments per issue: 3.59
  • Average comments per pull request: 1.5
  • Merged pull requests: 124
  • Bot issues: 1
  • Bot pull requests: 30
Past Year
  • Issues: 3
  • Pull requests: 16
  • Average time to close issues: about 1 hour
  • Average time to close pull requests: 22 days
  • Issue authors: 3
  • Pull request authors: 6
  • Average comments per issue: 1.0
  • Average comments per pull request: 2.0
  • Merged pull requests: 14
  • Bot issues: 1
  • Bot pull requests: 6
View more stats
Top Authors
Issue Authors
  • mschauer (22)
  • mwien (2)
  • currymj (1)
  • shuiruge (1)
  • jademackay (1)
  • Datseris (1)
  • rfourquet (1)
  • schnirz (1)
  • ga72kud (1)
  • bgroenks96 (1)
  • JuliaTagBot (1)
  • svilupp (1)
  • goedman (1)
  • JorgeLuizFranco (1)
Pull Request Authors
  • mschauer (86)
  • github-actions[bot] (26)
  • mwien (14)
  • schnirz (13)
  • dependabot[bot] (9)
  • JorgeLuizFranco (5)
  • sumantrak (2)
  • clementzach (2)
  • samuelsonric (2)
  • DilumAluthge (1)
  • RobertGregg (1)
  • svilupp (1)
  • JuliaTagBot (1)
Top Labels
Issue Labels
hacktoberfest (3) enhancement (2) help wanted (1)
Pull Request Labels
dependencies (9)

Packages

  • Total packages: 3
  • Total downloads:
    • julia 11 total
  • Total dependent packages: 1
    (may contain duplicates)
  • Total dependent repositories: 0
    (may contain duplicates)
  • Total versions: 104
proxy.golang.org: github.com/mschauer/causalinference.jl
  • Versions: 35
  • Dependent Packages: 0
  • Dependent Repositories: 0
Rankings
Dependent packages count: 5.4%
Average: 5.5%
Dependent repos count: 5.7%
Last synced: 6 months ago
proxy.golang.org: github.com/mschauer/CausalInference.jl
  • Versions: 35
  • Dependent Packages: 0
  • Dependent Repositories: 0
Rankings
Dependent packages count: 5.4%
Average: 5.5%
Dependent repos count: 5.7%
Last synced: 6 months ago
juliahub.com: CausalInference

Causal inference, graphical models and structure learning in Julia

  • Versions: 34
  • Dependent Packages: 1
  • Dependent Repositories: 0
  • Downloads: 11 Total
Rankings
Stargazers count: 5.4%
Forks count: 6.5%
Dependent repos count: 9.9%
Average: 15.2%
Dependent packages count: 38.9%
Last synced: 6 months ago

Dependencies

REQUIRE julia
  • Combinatorics 0.6.0
  • Distances *
  • Distributions *
  • LightGraphs 0.13.0
  • MetaGraphs *
  • NearestNeighbors *
  • SpecialFunctions *
  • Tables *
  • julia 0.7
test/REQUIRE julia
  • Documenter *
.github/workflows/CI.yml actions
  • actions/cache v1 composite
  • actions/checkout v2 composite
  • codecov/codecov-action v1 composite
  • julia-actions/julia-buildpkg v1 composite
  • julia-actions/julia-processcoverage v1 composite
  • julia-actions/julia-runtest v1 composite
  • julia-actions/setup-julia v1 composite
.github/workflows/CompatHelper.yml actions
  • julia-actions/setup-julia latest composite
.github/workflows/Documenter.yml actions
  • actions/checkout v2 composite
  • julia-actions/setup-julia v1 composite
.github/workflows/TagBot.yml actions
  • JuliaRegistries/TagBot v1 composite