What's Changed

Update dask client to correctly configure s3 access by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1383

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.4.3...0.4.4

- Jupyter Notebook
Published by robbibt 6 months ago

What's Changed

Fixes a major Dask performance issue when using using create_local_dask_cluster to launch a Dask cluster, by correctly using the configure_s3_access function https://github.com/GeoscienceAustralia/dea-notebooks/pull/1380
Minor fixes to Knowledge Hub docs in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1375, https://github.com/GeoscienceAustralia/dea-notebooks/pull/1377

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.4.2...0.4.3

- Jupyter Notebook
Published by robbibt 6 months ago

What's Changed

Add missing s3fs mosaicing dependency to DEA Tools by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1374

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.4.1...0.4.2

- Jupyter Notebook
Published by robbibt 7 months ago

What's Changed

This release adds several new features to DEA Notebooks and the DEA Tools Python package:

New Python tools for large-scale random sampling of xarray.DataArrays by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1363
A new dea_tools.mosaics Python submodule with command line utilities for generating continental COGs and VRTs from tiled data by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1362
A new forecasting/modelling notebook by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/911

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.4.0...0.4.1

- Jupyter Notebook
Published by robbibt 7 months ago

What's Changed

This PR makes major changes to DEA Tools Python packaging, aimed at making the package easier to install by making difficult dependencies like datacube optional extras. All Python code has been formatted for consistency using ruff, and Python packaging and publication has been updated to a more modern approach using pyproject.toml and uv.

You can now install DEA Tools more easily into any environment from PyPI. By only minimal dependencies will be installed: pip install dea-tools To install with optional dependencies: ```

Install with datacube dependencies

pip install dea-tools[datacube]

Install with dependencies required to launch Jupyter Notebooks

pip install dea-tools[jupyter]

# Install with optional dependencies required for DEA Notebooks code examples pip install dea-tools[jupyter,dask_gateway,hdstats,notebooks]

Install with all optional dependencies (including difficult to install packages)

pip install dea-tools[all]
```

Other new features include: - A new Wetlands Insight Tool interactive notebook for extracting times series plots of wetland dynamics over time - A new Accessing Gridded Climate Data notebook for accessing Australian-specific climate data and global climate reanalysis data (ERA5) - A new Generating Continental Scale Animations notebook for generating animations of the entire Australian continent - Tide modelling notebooks and code updated to use more powerful functions from eo-tides - Improvements and clean ups of classification tools and machine learning/ML notebooks

Breaking changes: - Tide modelling functionality in dea_tools.coastal is now deprecated and roomed in favour of eo-tides - dea_tools.spatial.interpolate_2d and contours_to_arrays functions now deprecated and removed

Pull requests

markdown edits to landcover and Landsat notebooks by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1342
New climate data notebook by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1335
typos by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1343
descriptions-improvements by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1344
Update USAGE.rst by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1346
Reuse workflow on provisioning db connection by @emmaai in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1347
Fix issue with loading climate data over THREDDS by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1350
Add WIT app to README.rst by @LaurenSchenk1 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1352
Update classification tools and ML notebooks by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1351
Use uv for managing Python package, simplify dependencies by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1349
Simplify package publication using uv by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1353
DEA Tools cleanup to improve user experience when datacube is not installed by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1354
Apply Ruff code formatting and linting to entire DEA Tools by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1356
Refactor to use eo-tides tide modelling tools by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1357
Merge WIT_app.py into wetlands.py in DEA Tools by @LaurenSchenk1 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1359
Update create_local_dask_cluster to work without datacube dependency by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1360
Final tidy up before DEA Tools 0.4.0 release by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1358

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.3.6...0.4.0

- Jupyter Notebook
Published by robbibt 8 months ago

dea-tools - 0.3.6

What's Changed

Publish latest changes from develop to stable to release to DEA Sandbox/KH by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1236
Fix bug affecting latest Sandbox image, update notebook code (#1237) by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1238
Merge innovation day improvements to stable by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1248
Merge develop to stable by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1252
Merge develop into stable by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1254
Merge develop to stable by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1259
Add latest changes to stable by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1264
Update stable with changes from develop by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1273
Deprecate tide modelling tools in favour of eo-tides by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1276
small fixes in input for calculate_indices() rgb() by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1277
Update product and band names in ML notebook Machine_learning_with_ODC (#1276) by @jennaguffogg in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1278
Implement comprehensive GitHub Actions integration tests using prod DEA ODC database by @omad in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1152
WIT Notebook fix csv output by @LaurenSchenk1 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1280
Publish changes to develop to DEA Sandbox and Knowledge Hub by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1281
Update README.md by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1282
Update load_ard for Sentinel-2C, add better error handling by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1283
Loosen pyTMD version restriction, fix broken DEA Tools build by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1284
Update PULLREQUESTTEMPLATE.md by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1288
Update PULLREQUESTTEMPLATE.md by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1293
Hide pull request template comments by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1306
Update test suit to fix failures and improve setup by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1299
updates to landcover notebooks and code for new Collection 3 by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1313
Add pre-commit hook to avoid duplicates by @emmaai in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1314
Exclude interactive notebooks from tests, only run "latest" on schedule (not PRs) by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1316
Smaller lc animations by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1315
changed order cells introducing descriptors by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1317
Landcover code improvements by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1320
Update files_ignore approach to properly ignore interactive notebooks in tests (attempt to fix #1321) by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1322
small changes for consistency by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1326
Update DEA Notebooks to use Sentinel-2C by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1312
WIT Interactive app by @LaurenSchenk1 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1325
Update lc planetary nb by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1330
fixed text by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1331
Landcover updates - brand new notebook by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1332
Update README.rst by @GL-S in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1333
Adding a verbose= parameter to load_ard by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1338
Documented a personal access token as a code comment (minor change) by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1339
Continental-scale animation notebook by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1336
Fix contiguity masking in load_ard by applying fuse function by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1341

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.3.5...0.3.6

- Jupyter Notebook
Published by robbibt 10 months ago

dea-tools - 0.3.5

What's Changed

Add support for model cropping within tide modelling functions by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1249
Update WIT to add note about loading polygons without elevation values by @LaurenSchenk1 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1250
Add GeoMAD to Notebooks sidebar and reorder sidebar items by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1251
Renamed the 'publish notebooks to knowledge hub' github event for readability by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1253
Moved GeoMAD notebook in the sidebar of KH by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1255
Minor updates for NCI environment compatibility by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1256
Updated all ODC Slack links to the new ODC Discord link by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1258
Intertidal exposure by @erialC-P in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1261
adding global SAR access through microsoft planetary compute by @abradley60 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1263
Update USAGE.rst by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1268
Minor compatibility change for tide modelling package by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1269
Mitch predict_xr by @mitchest in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1270
Update USAGE.rst by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1272
Fix broken code on unstable Sandbox image by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1274

New Contributors

@abradley60 made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1263
@mitchest made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1270

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.3.4...0.3.5

- Jupyter Notebook
Published by robbibt over 1 year ago

dea-tools - 0.3.4

What's Changed

Add missing dependency (#1190) by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1191
Point DEA Intertidal KH link to product page, not notebook (#1219) by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1220
Geomedian notebook by @margaretharrison in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1148
Temporarily modify spatial.py tests to work around odc-geo Geobox comparison precision issue by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1235
Fix bug affecting latest Sandbox image, update notebook code by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1237
reorganize dask compute to avoid repeated load in wetland turbidity notebook by @uchchwhash in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1240
Update change detection notebook by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1241
Update Chlorophyll notebook by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1242
Notebook runtime improvements by @JM-GA in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1245
Reduced run time on ML with ODC notebook by @erialC-P in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1243
Updating descriptions on the 'category pages' with new wording by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1246
Speed up WIT notebook by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1244
Update tide modelling notebook to be faster, add support for FES2022 by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1247

New Contributors

@margaretharrison made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1148

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.3.3...0.3.4

- Jupyter Notebook
Published by robbibt over 1 year ago

dea-tools - 0.3.3

What's Changed

Introduction to DEA Intertidal product notebook by @erialC-P in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1214
Test new alert box format by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1216
Point DEA Intertidal KH link to product page, not notebook by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1219
add csv export to DEA WIT notebook by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1222
Removed 'sandbox' from the DEA Explorer URLs by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1225
Update index.rst by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1227
Deleted the 'gen' folder used by Sphinx autosummary by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1228
Moved the mock_imports file into the dea-notebooks repo by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1229
Add updated xr_regression function for multi-dimensional linear regression by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1226
Adding DEAfrica Wetland Turbidity notebook for Australian study site by @Matt-dea in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1175
Add spatial interpolation with xr_interpolate notebook by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1233
Updates to product notebook Knowledge Hub links and DEA notebook content by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1221
Add ensemble tide modelling functionality to model_tides by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1231

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.3.2...0.3.3

- Jupyter Notebook
Published by robbibt over 1 year ago

dea-tools - 0.3.2

What's Changed

Add missing dependency by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1190
Adding PyPi link to DEA Tools introduction and rewording intro by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1192
Edited the repo's README by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1193
Changed one link by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1196
Fixing broken images on Knowledge Hub Noteboks Readme by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1197
Update USAGE.rst, Adding Citation (Issue #1178) by @ncimino1 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1181
Update all Knowledge Hub 'docs' links to new 'knowledge' links by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1201
Renamed all 'Github' to 'GitHub' by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1203
Sphinx autosummary minor update by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1202
Add updated xr_interpolate func and tests by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1205
Updated references to the old repo name 'dea-docs' to the new name by @benji-glitsos-ga in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1204
Updates to DEA Waterbodies notebooks and tools for v3.0 by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1199
DEA Waterbodies notebook for v3, closes issue #1200 by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1207
add citation to usage.rst by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1208
Change xr_interpolate extent Error to Warning by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1210
Update R^2 method in eval_metrics by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1211

New Contributors

@ncimino1 made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1181

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.3.1...0.3.2

- Jupyter Notebook
Published by robbibt almost 2 years ago

dea-tools - 0.3.1

What's Changed

A minor update to dea-tools including updates to tide modelling and parallel processing functions.

New feature: load_reproject function for loading external COG GeoTIFFs and reprojecting them to match a specific resolution or GeoBox.

Pull pixel_tide resampling into function for easier re-use by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1149
Update pixel_tides to work on non-Dask inputs by @erialC-P in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1155
Add threads flag to parallel apply by @alexgleith in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1171
Update several notebooks to use cleaner odc-geo code, including new load_reproject function by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1186

New Contributors

@matt-fry-ga made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1154

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.3.0...0.3.1

- Jupyter Notebook
Published by robbibt about 2 years ago

dea-tools - 0.3.0

What's changed

Overall updates

Major update to repository directory structure (new Interactive_apps directory, Frequently_used_code renamed to How_to_guides, DEA_datasets renamed to DEA_products)
All repository content updated to the latest DEA Collection 3 Landsat and Sentinel-2 data
Added extensive testing throughout repo (of both dea_tools and notebook content)

New Python package updates

New xr_pansharpen function supporting multiple options for pansharping Landsat imagery, including Brovey, ESRI, simple mean, PCA and HSV pansharpening (#994)
Major refactor of tide modelling functions (model_tides, pixel_tides) to add support for multiple tide models and parallel processing (#1077, #1112, #1142, #1084)
New function to calculate points on a line (#1014)
Updated load_ard to support Sentinel-2 data and the s2cloudless cloud mask (#984, #1000)
Update subpixel_contours to allow custom time formats (#1065)
Updated dea_tools.spatial functions to use spatial tools from odc-geo (#978, #1039)
New function to calculate points on a line (#1014)
New helper functions folium_map and ipyleaflet_map that enables easy placing of an xarray.Dataset on a webmap (#1145)
New folium_dual_map function to allow easily comparing datasets side-by-side (#1145)

New Jupyter notebooks and features

New introductory Wetlands Insight Tool notebook (#1102)
New introductory DEA Mangroves notebook (#1131)
New introductory DEA Surface Reflectance (Sentinel-2, Collection 3) notebook
New Sunglint masking with Sentinel-2 notebook (#1122)
New Pansharpening Landsat with xr_pansharpen notebook (#994)
New Combining data from DEA and Microsoft Planetary Computer notebook (#1097)
New Visualising coastal turbidity notebook (#1073)
New Determining seasonal extent of waterbodies with Sentinel-2 notebook (#1054)
New Monitoring water quality notebook (#1146)
New Near real-time burnt area mapping using DEA notebook (#1049)
Added a search bar and marker to interactive widgets (#1096)
Updated DEA Landsat Surface Reflectance notebook to include an example of cloud buffering with load_ard (#1094)
Updated Generating satellite imagery animations notebook to add a combined Sentinel-2 and Landsat option (#1043)
Extracted coastal transect app from DEA Coastlines notebook and moved it to a new Interactive_apps notebook (#1032)

Examples

New Contributors

@geoscience-aman made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/956
@andressutton made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/991
@LaurenSchenk1 made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1025
@treefern made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1026
@mdasi00 made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1029
@Joram95 made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1073
@Ariana-B made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/1081

PyPI

https://pypi.org/project/dea-tools/0.3.0/

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.2.7...0.3.0

- Jupyter Notebook
Published by robbibt over 2 years ago

dea-tools - Release 0.2.8

What's Changed

major update to the load_ard function to allow the function to support the new Sentinel-2 Collection 3 products https://github.com/GeoscienceAustralia/dea-notebooks/pull/984
wetlands.py wetlands module added to run DEA Wetlands Insight Tool notebook https://github.com/GeoscienceAustralia/dea-notebooks/pull/1102
Update and simplify xr_rasterize, xr_vectorise and subpixel_contours by using odc-geo https://github.com/GeoscienceAustralia/dea-notebooks/pull/978
Add missing dependencies to setup.py, remove no longer used segmentation.py https://github.com/GeoscienceAustralia/dea-notebooks/pull/1003

PyPI

https://pypi.org/project/dea-tools/0.2.8/

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.2.7...0.2.8

- Jupyter Notebook
Published by uchchwhash over 2 years ago

dea-tools - 0.2.7

What's Changed

Fix missing function import in pixel_tides by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/940

PyPI

https://pypi.org/project/dea-tools/0.2.7/

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.2.6...0.2.7

- Jupyter Notebook
Published by robbibt over 3 years ago

dea-tools - 0.2.6

New features

`Real_world_examples/Generating_satellite_animations.ipynb`

An interactive "app" notebook for exporting time series satellite imagery animations by drawing a box on a map and selecting a custom time period.

https://user-images.githubusercontent.com/17680388/183581425-bd015371-8ec6-49d0-a035-1f64f98c7da2.mp4

`dea_tools.coastal`

dea_tools.coastal.model_tides: A replacement for the existing tidal_tag func that uses the open-source FES2014 tidal model.
dea_tools.coastal.pixel_tides: A more advanced tidal model function that models tides across the 2D extent of a satellite imagery dataset, then interpolates that data into each pixel of the dataset. Used in DEA Coastlines to create seamless tidal composites and shorelines (with no discontinuities along study area boundaries).

`dea_tools.datahandling`

dea_tools.datahandling.parallel_apply: A function for applying a custom function in parallel along a specific dimension in an xarray (e.g. for each timestep), using multiprocessing from the concurrent.futures package

`dea_tools.spatial`

dea_tools.spatial.hillshade: A function for generating hillshades on DEM data, using custom sun angles and azimuths.
dea_tools.spatial.sun_angles: A function for extracting average sun angles and azimuths from DEA Collection 3 metadata for each timestep in a satellite dataset. Can be used to identify pixels that are likely to be affected by terrain shadow in surface reflectance data.

What's Changed (full changelog)

Fix failed Dask worker pod launch due to invalid username characters by @jmettes in https://github.com/GeoscienceAustralia/dea-notebooks/pull/928
New generating animations interactive notebook by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/927
Waterbodies fix by @vnewey in https://github.com/GeoscienceAustralia/dea-notebooks/pull/932
Move datacube import lower in STAC notebook to reduce confusion by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/933
remove unused import of write_geotiff by @ErinKenna in https://github.com/GeoscienceAustralia/dea-notebooks/pull/930
Add missing rasterstats and geopy dependency by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/934
Add funcs from DEA Coastlines and DEA Intertidal to DEA Tools by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/936
fix to Surface Area Duration NB by @vnewey in https://github.com/GeoscienceAustralia/dea-notebooks/pull/937

New Contributors

@jmettes made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/928
@vnewey made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/932
@ErinKenna made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/930

PyPI

https://pypi.org/project/dea-tools/

- Jupyter Notebook
Published by robbibt over 3 years ago

dea-tools - 0.2.5

What's Changed

Add ability to plot a colour bar on level 4 animation by @Kooie-cate in https://github.com/GeoscienceAustralia/dea-notebooks/pull/915
Update notebooks to use C3 derivatives by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/917
Optimise test github action by @pindge in https://github.com/GeoscienceAustralia/dea-notebooks/pull/920
Unpin index image for docker-compose by @pindge in https://github.com/GeoscienceAustralia/dea-notebooks/pull/921
Remove ignore from basic analysis notebook tests by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/922
Support for FES2014 tide model via CNES aviso-fes. by @rtaib in https://github.com/GeoscienceAustralia/dea-notebooks/pull/919
Pin pip to allow build Action to work by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/924

New Contributors

@pindge made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/920
@rtaib made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/919

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.2.4...0.2.5

- Jupyter Notebook
Published by robbibt over 3 years ago

dea-tools - 0.2.4

What's Changed

Updates to ML notebooks/scripts, load_ard, and phenology

Update Polygon_drill.ipynb by @CEKrause in https://github.com/GeoscienceAustralia/dea-notebooks/pull/897
DEA Land Cover notebook suite by @bellemae in https://github.com/GeoscienceAustralia/dea-notebooks/pull/898
Update animation notebook to use MP4s by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/903
Add Fractional Cover reprocessing notebook and results by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/905
Add DEA training to repo by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/906
Update README.rst by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/907
Ah, add my conf paper by @BexDunn in https://github.com/GeoscienceAustralia/dea-notebooks/pull/908
Remove spatial cross validation from Scalable ML by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/909
Update phenology notebook and script by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/910
Add morphological filtering to load_ard by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/912
Conference contribution GeoPython by @sebfoe in https://github.com/GeoscienceAustralia/dea-notebooks/pull/914

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.2.3...0.2.4

- Jupyter Notebook
Published by cbur24 almost 4 years ago

dea-tools - 0.2.3

What's Changed

Updated image export notebook to an interactive app that requires no coding by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/894

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.2.2...0.2.3

- Jupyter Notebook
Published by robbibt about 4 years ago

dea-tools - 0.2.2

What's Changed

Add new func for plotting fmask data with automatic colours by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/886
Update to document new Coastlines paper and use recently added Dask and Geopandas functionality by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/887
Updated courses and training by @Bethany-M in https://github.com/GeoscienceAustralia/dea-notebooks/pull/889
Add coastlines paper to repo usage by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/890
Add new interactive DEA Coastlines app and move all widgets to dea_tools.app submodule by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/892

New Contributors

@Bethany-M made their first contribution in https://github.com/GeoscienceAustralia/dea-notebooks/pull/889

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.2.1...0.2.2

- Jupyter Notebook
Published by robbibt about 4 years ago

dea-tools - 0.2.1

What's Changed

Notebook for exporting high quality satellite images from an interactive map by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/870
Add new functionality to Image export notebook and functions by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/873
Fix image export for Sentinel-2 NRT by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/876
Add first set of basic Testbook tests to DEA Notebooks by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/872
Add option for returning dask client by @cbur24 in https://github.com/GeoscienceAustralia/dea-notebooks/pull/882
Remove in-text references to Scripts by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/883
Fix broken tidal_tag function in dea_tools.coastal by @robbibt in https://github.com/GeoscienceAustralia/dea-notebooks/pull/884

Full Changelog: https://github.com/GeoscienceAustralia/dea-notebooks/compare/0.2.0...0.2.1

- Jupyter Notebook
Published by robbibt over 4 years ago

dea-tools - 0.2.0

Changes

Updated all notebooks for compatibility with the recently updated Python 3.8 DEA Sandbox environment.
Updated the DEA Notebooks repository to remove the Scripts directory, and load functions from the dea-tools Python module instead (located in the Tools directory of the repository). If you previously imported functions from Scripts using the following syntax: import sys sys.path.insert(1, '../Scripts') from dea_datahandling import load_ard

Please replace this with:

import sys sys.path.insert(1, '../Tools') from dea_tools.datahandling import load_ard Alternatively, dea-tools can now be installed directly from PyPI using: pip install dea-tools from dea_tools.datahandling import load_ard

Note: If you previously accessed the DEA Sandbox environment, the Scripts folder will not be removed automatically. We recommend deleting it yourself by opening a terminal, then typing rm -r Scripts:

- Jupyter Notebook
Published by robbibt over 4 years ago

dea-tools - 0.1.1

Release of dea-tools onto PyPI: https://pypi.org/project/dea-tools/

This allows functions and algorithms from dea-tools to be installed easily using:

pip install dea-tools

- Jupyter Notebook
Published by robbibt over 4 years ago

dea-tools - 0.1.0

dea-tools with versioning

- Jupyter Notebook
Published by MatthewJA over 4 years ago

dea-tools - 0.1.0a1

Prototype release for working with versioning of dea-tools.

- Jupyter Notebook
Published by MatthewJA over 4 years ago

dea-tools - Pre dea-tools archive

1 December 2020 update: To make it easier to import DEA functions on the NCI, Sandbox as well as external repositories or platforms like DEAfrica, we are planning to build the modules and functions currently located in /Scripts into a pip-installable Python package (https://github.com/GeoscienceAustralia/dea-notebooks/issues/538, https://github.com/GeoscienceAustralia/dea-notebooks/pull/705). This release tags the last version of the develop branch prior to merging in these changes.

- Jupyter Notebook
Published by robbibt about 5 years ago

dea-tools - DEA-notebooks refresh

9 January 2020 update: This repository was recently upgraded to a new directory structure and set of improved and easier to use Jupyter notebooks and scripts. To access an archive of the previous version of the repository, visit the master_archive branch. Please note that notebooks and code in the master_archive branch are no longer maintained or supported.

- Jupyter Notebook
Published by robbibt about 6 years ago

dea-tools - Pre-refresh archive

On January 9th, dea-notebooks was upgraded to a new directory structure and a new and improved set of Jupyter notebooks and scripts. This release preserves the history of the repository prior to this change. Please note that notebooks and code in this release (and earlier) are no longer maintained or supported.

Also archived in the master_archive branch: https://github.com/GeoscienceAustralia/dea-notebooks/tree/master_archive

- Jupyter Notebook
Published by robbibt about 6 years ago

Recent Releases of dea-tools

dea-tools - 0.4.4

What's Changed

dea-tools - 0.4.3

What's Changed

dea-tools - 0.4.2

What's Changed

dea-tools - 0.4.1

What's Changed

dea-tools - 0.4.0

What's Changed

Install with datacube dependencies

Install with dependencies required to launch Jupyter Notebooks

Install with all optional dependencies (including difficult to install packages)

Pull requests

dea-tools - 0.3.6

What's Changed

dea-tools - 0.3.5

What's Changed

New Contributors

dea-tools - 0.3.4

What's Changed

New Contributors

dea-tools - 0.3.3

What's Changed

dea-tools - 0.3.2

What's Changed

New Contributors

dea-tools - 0.3.1

What's Changed

New Contributors

dea-tools - 0.3.0

What's changed

Overall updates

New Python package updates

New Jupyter notebooks and features

Examples

New Contributors

PyPI

dea-tools - Release 0.2.8

What's Changed

PyPI

dea-tools - 0.2.7

What's Changed

PyPI

dea-tools - 0.2.6

New features

Real_world_examples/Generating_satellite_animations.ipynb

dea_tools.coastal

dea_tools.datahandling

dea_tools.spatial

What's Changed (full changelog)

New Contributors

PyPI

dea-tools - 0.2.5

What's Changed

New Contributors

dea-tools - 0.2.4

What's Changed

dea-tools - 0.2.3

What's Changed

dea-tools - 0.2.2

What's Changed

New Contributors

dea-tools - 0.2.1

What's Changed

dea-tools - 0.2.0

Changes

dea-tools - 0.1.1

dea-tools - 0.1.0

dea-tools - 0.1.0a1

dea-tools - Pre dea-tools archive

dea-tools - DEA-notebooks refresh

dea-tools - Pre-refresh archive

`Real_world_examples/Generating_satellite_animations.ipynb`

`dea_tools.coastal`

`dea_tools.datahandling`

`dea_tools.spatial`