gitlab2prov
🔍️ Extract provenance information (W3C PROV) from GitLab projects.
Science Score: 85.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 8 DOI reference(s) in README -
✓Academic publication links
Links to: acm.org, zenodo.org -
✓Committers with academic emails
3 of 4 committers (75.0%) from academic institutions -
✓Institutional organization owner
Organization dlr-sc has institutional domain (www.dlr.de) -
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (16.5%) to scientific vocabulary
Keywords
Repository
🔍️ Extract provenance information (W3C PROV) from GitLab projects.
Basic Info
Statistics
- Stars: 16
- Watchers: 7
- Forks: 3
- Open Issues: 8
- Releases: 15
Topics
Metadata Files
README.md
Welcome to gitlab2prov! 👋
gitlab2provis a Python library and command line tool that extracts provenance information from GitLab projects.
The gitlab2prov data model has been designed according to W3C PROV specification.
The model documentation can be found here.
️🏗️ ️Installation
Please note that this tool requires Git to be installed on your machine.
Clone the project and install using pip:
bash
pip install .
Or install the latest release from PyPi:
bash
pip install gitlab2prov
To install gitlab2prov with all extra dependencies require the [dev] extras:
bash
pip install .[dev] # clone repo, install with extras
pip install gitlab2prov[dev] # PyPi, install with extras
⚡ Getting started
gitlab2prov needs a personal access token to clone git repositories and to authenticate with the GitLab API.
Follow this guide to create an access token with the required scopes.
🚀 Usage
gitlab2prov can be configured using the command line interface or by providing a configuration file in .yaml format.
Command Line Usage
The command line interface consists of commands that can be chained together like a unix pipeline.
``` Usage: gitlab2prov [OPTIONS] COMMAND1 [ARGS]... [COMMAND2 [ARGS]...]...
Extract provenance information from GitLab projects.
Options: --version Show the version and exit. --verbose Enable logging to 'gitlab2prov.log'. --config FILE Read config from file. --validate FILE Validate config file and exit. --help Show this message and exit.
Commands: combine Combine multiple graphs into one. extract Extract provenance information for one or more... load Load provenance files. merge-duplicated-agents Merge duplicated agents based on a name to... pseudonymize Pseudonymize a provenance graph. save Save provenance information to a file. stats Print statistics such as node counts and... ```
Configuration Files
gitlab2prov supports configuration files in .yaml format that are functionally equivalent to command line invocations.
To read configuration details from a file instead of specifying on the command line, use the --config option:
```ini
initiate a run using a config file
gitlab2prov --config config/example.yaml
You can validate your config file using the provided JSON-Schema `gitlab2prov/config/schema.json` that comes packaged with every installation:
ini
check config file for syntactical errors
gitlab2prov --validate config/example.yaml ```
Config file example:
yaml
- extract:
url: ["https://gitlab.com/example/foo"]
token: tokenA
- extract:
url: ["https://gitlab.com/example/bar"]
token: tokenB
- load:
input: [example.rdf]
- pseudonymize:
- combine:
- save:
output: combined
format: [json, rdf, xml, dot]
- stats:
fine: true
explain: true
formatter: table
The config file example is functionally equivalent to this command line invocation:
gitlab2prov extract -u https://gitlab.com/example/foo -t tokenFoo \
extract -u https://gitlab.com/example/bar -t tokenBar \
load -i example.rdf \
pseudonymize \
combine \
save -o combined -f json -f rdf -f xml -f dot \
stats --fine --explain --formatter table
🎨 Provenance Output Formats
gitlab2prov supports output formats that the prov library provides:
* PROV-N
* PROV-O (RDF)
* PROV-XML
* PROV-JSON
* Graphviz (DOT)
🤝 Contributing
Contributions and pull requests are welcome!
For major changes, please open an issue first to discuss what you would like to change.
✨ How to cite
If you use GitLab2PROV in a scientific publication, we would appreciate citations to the following paper:
- Schreiber, A., de Boer, C. and von Kurnatowski, L. (2021). GitLab2PROV—Provenance of Software Projects hosted on GitLab. 13th International Workshop on Theory and Practice of Provenance (TaPP 2021), USENIX Association
Bibtex entry:
BibTeX
@InProceedings{SchreiberBoerKurnatowski2021,
author = {Andreas Schreiber and Claas de~Boer and Lynn von~Kurnatowski},
booktitle = {13th International Workshop on Theory and Practice of Provenance (TaPP 2021)},
title = {{GitLab2PROV}{\textemdash}Provenance of Software Projects hosted on GitLab},
year = {2021},
month = jul,
publisher = {{USENIX} Association},
url = {https://www.usenix.org/conference/tapp2021/presentation/schreiber},
}
You can also cite specific releases published on Zenodo:
✏️ References
Influencial Software for gitlab2prov
* Martin Stoffers: "Gitlab2Graph", v1.0.0, October 13. 2019, GitHub Link, DOI 10.5281/zenodo.3469385
- Quentin Pradet: "How do you rate limit calls with aiohttp?", GitHub Gist, MIT LICENSE
Influencial Papers for gitlab2prov:
De Nies, T., Magliacane, S., Verborgh, R., Coppens, S., Groth, P., Mannens, E., and Van de Walle, R. (2013). Git2PROV: Exposing Version Control System Content as W3C PROV. In Poster and Demo Proceedings of the 12th International Semantic Web Conference (Vol. 1035, pp. 125–128).
Packer, H. S., Chapman, A., and Carr, L. (2019). GitHub2PROV: provenance for supporting software project management. In 11th International Workshop on Theory and Practice of Provenance (TaPP 2019).
Papers that refer to gitlab2prov:
Andreas Schreiber, Claas de Boer (2020). Modelling Knowledge about Software Processes using Provenance Graphs and its Application to Git-based VersionControl Systems. In ICSEW'20: Proceedings of the IEEE/ACM 42nd Conference on Software Engineering Workshops (pp. 358–359).
Tim Sonnekalb, Thomas S. Heinze, Lynn von Kurnatowski, Andreas Schreiber, Jesus M. Gonzalez-Barahona, and Heather Packer (2020). Towards automated, provenance-driven security audit for git-based repositories: applied to germany's corona-warn-app: vision paper. In Proceedings of the 3rd ACM SIGSOFT International Workshop on Software Security from Design to Deployment (pp. 15–18).
Andreas Schreiber (2020). Visualization of contributions to open-source projects. In Proceedings of the 13th International Symposium on Visual Information Communication and Interaction. ACM, USA.
📜 Dependencies
gitlab2prov depends on several open source packages that are made freely available under their respective licenses.
| Package | License |
| --------------------------------------------------------------- | ------------------------------------------------------------------------------------------------------------------------- |
| GitPython | |
| click |
|
| python-gitlab |
|
| prov |
|
| jsonschema |
|
| ruamel.yaml |
|
| pydot |
|
📝 License
This project is MIT licensed.
Copyright © 2019 German Aerospace Center (DLR) and individual contributors.
Owner
- Name: DLR Institute for Software Technology
- Login: DLR-SC
- Kind: organization
- Email: opensource@dlr.de
- Location: Cologne, Berlin, Braunschweig, Oberpfaffenhofen, Bremen
- Website: http://www.dlr.de/sc
- Twitter: DLR_software
- Repositories: 62
- Profile: https://github.com/DLR-SC
German Aerospace Center (DLR)
Citation (CITATION.cff)
cff-version: 1.2.0
message: "If you use GitLab2PROV in your research, please cite it using these metadata."
title: GitLab2PROV
abstract: "gitlab2prov is a Python library and command line tool that extracts provenance information from GitLab projects."
type: software
authors:
- family-names: "de Boer"
given-names: Claas
affiliation: "German Aerospace Center (DLR)"
orcid: "https://orcid.org/0000-0002-1841-8099"
- family-names: Schreiber
given-names: Andreas
affiliation: "German Aerospace Center (DLR)"
orcid: "https://orcid.org/0000-0001-5750-5649"
version: "2.2.0"
date-released: "2023-09-05"
license: MIT
repository-code: "https://github.com/DLR-SC/gitlab2prov"
references:
- authors:
- family-names: Schreiber
given-names: Andreas
affiliation: "German Aerospace Center (DLR)"
orcid: "https://orcid.org/0000-0001-5750-5649"
- family-names: "de Boer"
given-names: Claas
affiliation: "German Aerospace Center (DLR)"
orcid: "https://orcid.org/0000-0002-1841-8099"
- family-names: "von Kurnatowski"
given-names: Lynn
affiliation: "German Aerospace Center (DLR)"
orcid: "https://orcid.org/0000-0001-5144-702X"
title: "GitLab2PROV—Provenance of Software Projects hosted on GitLab"
type: conference-paper
conference:
name: "13th International Workshop on Theory and Practice of Provenance (TaPP 2021)"
year: 2021
month: 7
keywords:
- provenance
- git
- "software-analytics"
- gitlab
- "w3c-prov"
GitHub Events
Total
- Fork event: 1
Last Year
- Fork event: 1
Committers
Last synced: 6 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| cdboer | c****r@c****e | 543 |
| Andreas Schreiber | a****r@d****e | 72 |
| de Boer, Claas | c****r@d****e | 6 |
| Daniel Mohr | d****r@d****e | 1 |
Issues and Pull Requests
Last synced: 5 months ago
All Time
- Total issues: 87
- Total pull requests: 13
- Average time to close issues: 6 months
- Average time to close pull requests: about 19 hours
- Total issue authors: 9
- Total pull request authors: 2
- Average comments per issue: 1.46
- Average comments per pull request: 0.23
- Merged pull requests: 12
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- cdboer (60)
- onyame (17)
- LuigiaCristiano (3)
- akshaykagarwal (2)
- schlauch (1)
- sdruskat (1)
- hecking (1)
- daniel-mohr (1)
- muelldlr (1)
Pull Request Authors
- cdboer (12)
- daniel-mohr (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- pypi 89 last-month
- Total dependent packages: 0
- Total dependent repositories: 1
- Total versions: 12
- Total maintainers: 1
pypi.org: gitlab2prov
Extract provenance information (W3C PROV) from GitLab projects.
- Documentation: https://gitlab2prov.readthedocs.io/
- License: MIT License Copyright (c) 2019 German Aerospace Center (DLR) Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions: The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
-
Latest release: 2.2.0
published over 2 years ago
Rankings
Maintainers (1)
Dependencies
- prov *
- actions/checkout v3 composite
- citation-file-format/cffconvert-github-action 2.0.0 composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- actions/checkout v3 composite
- actions/setup-python v4 composite
- click *
- git-python *
- jsonschema *
- prov >=2.0.0
- pydot >=1.2.0
- python-gitlab *
- ruamel.yaml *