Releases | Open Source Science

Distributions v0.25.120

Merged pull requests: - Document and export gradlogpdf. (#1974) (@tpapp) - More efficient sampling with MvNormalCanon (#1977) (@devmotion)

Closed issues: - Documentation for gradlogpdf (#1844) - cov of MixtureModel{<:MvNormal} should return PDMat? (#1971) - Edge case for truncated (#1975)

- Julia
Published by github-actions[bot] 10 months ago

Distributions v0.25.119

Diff since v0.25.118

Merged pull requests: - Implement std(::MultivariateDistribution) (#1352) (@bicycle1885) - BREAKING Fix loss of structure in cov() and invcov() of AbstractMvNormal subtypes (#1373) (@st--) - add partype method to lognormal and semicircle (#1773) (@bgctw) - Fix underflow of logccdf of PGeneralizedGaussian (#1932) (@devmotion) - Allow ForwardDiff v1 (#1957) (@mcabbott) - Require Julia >= 1.10 (#1959) (@devmotion) - Fix warnings in tests (#1960) (@devmotion) - Remove docstring of non-existent method (#1962) (@abhro) - Reduce allocations of cov(::MultivariateMixture) (#1967) (@devmotion) - Use generic axpy! instead of calling BLAS.axpy! (#1968) (@jishnub)

Closed issues: - why do cov and invcov call full? (#572) - Underflow in logccdf for PGeneralizedGaussian (#1916) - Matrix normal distribution support (#1946) - May I suggest adding the sprand(::Distributions.Distribution, ...) method, like rand() does? (#1955) - cov(d::MultivariateMixture) assumes overly specific typing on component covariance (#1969) - Random sample from LogNormal does not return values of the same type as its parameters (#1970)

- Julia
Published by github-actions[bot] 11 months ago

Distributions - v0.25.118

Distributions v0.25.118

Diff since v0.25.117

Merged pull requests: - Fix type headers in docstrings (#1943) (@abhro) - Fix inverse wishart constructor with integer ScalMat/PDiagMat (#1953) (@vandenman)

Closed issues: - Geometric() could be 5x faster. (#1933) - Support for Unitful parameters (#1940) - MethodError on initializing DiscreteNonParametric with @view (#1941) - truncated Normal with zero mean and std hangs (#1942) - InverseWishart constructor errors for ::Int, ::PDMats.ScalMat{Int64} (#1948)

- Julia
Published by github-actions[bot] 12 months ago

Distributions - v0.25.117

Distributions v0.25.117

Diff since v0.25.116

Merged pull requests: - CompatHelper: bump compat for Documenter to 1 for package docs, (keep existing compat) (#1778) (@github-actions[bot]) - Add NamedTupleVariate and ProductNamedTupleDistribution (#1803) (@sethaxen) - Fix mode of LKJCholesky (#1938) (@devmotion)

Closed issues: - quantile() function for multivariate normal distribution (#569) - Document Thread Safety (#1829)

- Julia
Published by github-actions[bot] about 1 year ago

Distributions - v0.25.116

Distributions v0.25.116

Diff since v0.25.115

Merged pull requests: - Special case Geometric(OneHalf()) (#1934) (@LilithHafner)

Closed issues: - Multiplication of ScalMat and FillArray is ambiguous (#1925)

- Julia
Published by github-actions[bot] about 1 year ago

Distributions - v0.25.115

Distributions v0.25.115

Diff since v0.25.114

Merged pull requests: - Re-write median(Binomial) to improve speed (#1928) (@marcusps)

Closed issues: - Speed up median(Binomial) (#1926) - rand!(a, Multinomial(100, p)) StackOverflowError bug (#1929)

- Julia
Published by github-actions[bot] about 1 year ago

Distributions - v0.25.114

Distributions v0.25.114

Diff since v0.25.113

Merged pull requests: - Bump codecov/codecov-action from 4 to 5 (#1917) (@dependabot[bot]) - Fix median for Binomial distribution (#1924) (@marcusps)

Closed issues: - Custom univariate sampler not working as expected (#1132) - support gives error on infinite discrete distributions (#1919) - Failure to precompile, no libquadmath.so.0 (#1922) - median can give incorrect answer for Binomial distribution (#1923)

- Julia
Published by github-actions[bot] about 1 year ago

Distributions - v0.25.113

Distributions v0.25.113

Diff since v0.25.112

Merged pull requests: - Geometric parameter should be on (0, 1] (#1906) (@palday)

Closed issues: - Stack overflow in rand!() with product distribution (#1909)

- Julia
Published by github-actions[bot] over 1 year ago

Distributions - v0.25.112

Distributions v0.25.112

Diff since v0.25.111

Merged pull requests: - Specialized vector rand! for many distributions (#1879) (@quildtide) - Test pre-release Julia versions (#1888) (@devmotion) - Relax Fill return type in mvlognormal tests (#1890) (@jishnub) - mark the MatrixReshaped type as deprecated (#1893) (@stevengj) - Fix deprecation warnings in tests (#1894) (@devmotion)

Closed issues: - Support for Rationals in discrete distributions? (#309) - Adding a NamedTupleVariate (#1762) - truncated does not work with Turing.jl's random variables (#1889) - [InverseGaussian?] quantile() hangs for larger number of σ's (quantile_newton not converging) (#1898)

- Julia
Published by github-actions[bot] over 1 year ago

Distributions - v0.25.111

Distributions v0.25.111

Diff since v0.25.110

Merged pull requests: - fix type stability of sampling from Chisq, TDist, Gamma (#1885) (@Red-Portal)

Closed issues: - How to draw a density sample from a multivariate normal (#1887)

- Julia
Published by github-actions[bot] over 1 year ago

Distributions - v0.25.110

Distributions v0.25.110

Diff since v0.25.109

Merged pull requests: - Add Convolve for DiscreteNonParametric (Redux) (#1850) (@mharradon) - Update CI: No nightly tests, improve macOS CI setup + use julia-actions/cache (#1863) (@devmotion) - Bump julia-actions/cache from 1 to 2 (#1876) (@dependabot[bot]) - Fix InverseGaussian cdf overflows (#1882) (@quildtide)

Closed issues: - installation warning/error about DistributionsTestExt (not) precompiling (#1842) - New GPL dependency introduced through AliasTables (#1864) - Rename ValueSupport subtypes to more specific names (#1870) - Who is maintaining Distributions.jl? (#1871) - cdf of InverseGaussian (#1873) - Support parametrization of Beta (Mean and variance Beta(μ, σ²)) (#1877)

- Julia
Published by github-actions[bot] over 1 year ago

Distributions - v0.25.109

Distributions v0.25.109

Diff since v0.25.108

Merged pull requests: - Fix fit docs (#1746) (@ParadaCarleton) - Update CI.yml to include mac aarch64 (#1856) (@ViralBShah) - Replace deprecated lfact(x) (#1857) (@THargreaves) - fixing error in xval function in gumbel.jl (#1859) (@ajshephard) - Fix failing tests on 1.11-beta (#1862) (@andreasnoack) - Clamp cdf and ccdf of Truncated (#1865) (@devmotion)

Closed issues: - 0 <= cdf(Normal(),x) <= 1 not always true. (#1853) - 0 <= cdf(truncated(Normal(2.5, 0.2), lower=0.0),x) not always true. (#1854) - Suggestion: 3-argument cdf() (#1855) - Error in xval in gumbel (#1858)

- Julia
Published by github-actions[bot] over 1 year ago

Distributions - v0.25.108

Distributions v0.25.108

Diff since v0.25.107

Merged pull requests: - Bump actions/cache from 3 to 4 (#1828) (@dependabot[bot]) - microoptimization on rand(::AliasTable) (#1831) (@adienes) - Bump codecov/codecov-action from 3 to 4 (#1835) (@dependabot[bot]) - Remove TruncatedNormal (#1837) (@andreasnoack) - Bump julia-actions/setup-julia from 1 to 2 (#1846) (@dependabot[bot]) - Use a faster implementation of AliasTables (#1848) (@LilithHafner)

Closed issues: - AliasTable method is not working for unbalanced values (#832) - What is the current state of empirical univariate distribution? (#1047) - StackOverflowError with rand! (#1822) - sampling from BetaSampler slower than directly from Beta (#1830) - Infinite loop for quantile of InverseGaussian for specific value (#1833)

- Julia
Published by github-actions[bot] almost 2 years ago

Distributions - v0.25.107

Distributions v0.25.107

Diff since v0.25.106

Merged pull requests: - Fix typo in Gumbel gradlogpdf (#1821) (@rubenseyer)

- Julia
Published by github-actions[bot] about 2 years ago

Distributions - v0.25.106

Distributions v0.25.106

Diff since v0.25.105

Merged pull requests: - Replace broadcasting over distributions with broadcasting with partially applied functions (#1818) (@devmotion)

Closed issues: - rand! with Uniform distribution does not work with CUDA arrays (#1815)

- Julia
Published by github-actions[bot] about 2 years ago

Distributions - v0.25.105

Distributions v0.25.105

Diff since v0.25.104

Merged pull requests: - CompatHelper: bump compat for GR to 0.73 for package docs, (keep existing compat) (#1811) (@github-actions[bot]) - Clarify definitions of inverse CDF functions (#1814) (@sethaxen) - Fix eachvariate with zero variates (#1819) (@devmotion)

Closed issues: - inv* functions are not really inverses (#1813) - rand(::Sampleable{Multivariate}, 0) errors (#1817)

- Julia
Published by github-actions[bot] about 2 years ago

Distributions - v0.25.104

Distributions v0.25.104

Diff since v0.25.103

Merged pull requests: - Fix method ambiguities & unbound parameters + add Aqua tests (#1804) (@devmotion)

Closed issues: - Relaxing ::Real requirement (#1801) - Handle SparseArrays via Pkg extention? (#1802)

- Julia
Published by github-actions[bot] about 2 years ago

Distributions - v0.25.103

Distributions v0.25.103

Diff since v0.25.102

Merged pull requests: - Move test utilities to an extension (#1791) (@devmotion) - CompatHelper: add new compat entry for Statistics at version 1, (keep existing compat) (#1793) (@github-actions[bot]) - Add compat entries for stdlibs (#1794) (@devmotion)

Closed issues: - Adding MvLogitNormal (#1771) - Failing tests on master (#1789)

- Julia
Published by github-actions[bot] over 2 years ago

Distributions - v0.25.102

Distributions v0.25.102

Diff since v0.25.101

Merged pull requests: - Add MvLogitNormal (#1774) (@sethaxen)

- Julia
Published by github-actions[bot] over 2 years ago

Distributions - v0.25.101

Distributions v0.25.101

Diff since v0.25.100

Merged pull requests: - Update docstring of NegativeBinomial (#1734) (@heliosdrm) - Bump actions/checkout from 3 to 4 (#1764) (@dependabot[bot]) - Fix undef ref in lkj_chol sampling (#1782) (@chriselrod)

Closed issues: - Would a Hyperexponential PR be wanted? (#275) - Wiener First Passage Time Distribution (#1749) - Move entropy to StatsAPI.jl and import it from there? (#1759) - Accept Transducers.jl as a Dependency? (#1767) - MvNormal Disrupts Array Types (#1768) - rand gives wrong results for MvNormal with PSDMat covariance (#1776) - walkdir(dirs=false) option (#1777) - MvNormal constructor unnecessarily recomputes cholesky every time with ForwardDiff (#1781)

- Julia
Published by github-actions[bot] over 2 years ago

Distributions - v0.25.100

Distributions v0.25.100

Diff since v0.25.99

Closed issues: - Why not Base.in for the support (e.g. RealInterval) (#1756) - Cauchy Float32 does not honor the element type of distribution (#1757)

Merged pull requests: - Import Base.in (#1758) (@bvdmitri)

- Julia
Published by github-actions[bot] over 2 years ago

Distributions - v0.25.99

Distributions v0.25.99

Diff since v0.25.98

Closed issues: - Review and reduce dependency list with package extensions? (#1751) - typos (#1753)

Merged pull requests: - Project.toml cleanup (#1752) (@dkarrasch) - fix typos (#1754) (@spaette)

- Julia
Published by github-actions[bot] over 2 years ago

Distributions - v0.25.98

Distributions v0.25.98

Diff since v0.25.97

Closed issues: - Multinomial distribution rand does not support Float32 probability vectors (#1032) - Multinomial sampling not working with Float32 vector (#1733)

Merged pull requests: - UPDATED: Multinomial distribution rand does not support Float32 probability vectors (#1738) (@nomadbl)

- Julia
Published by github-actions[bot] over 2 years ago

Distributions - v0.25.97

Distributions v0.25.97

Diff since v0.25.96

Closed issues: - Wrong quantiles calculated for some Truncated (#1726)

Merged pull requests: - Fix typos (#1740) (@qwjyh) - Documentation fix (#1741) (@chskcau) - Inbounds Error Fixes for some Univariates (#1742) (@itsdebartha)

- Julia
Published by github-actions[bot] over 2 years ago

Distributions - v0.25.96

Distributions v0.25.96

Diff since v0.25.95

Merged pull requests: - GeneralizedPareto improvement (#1466) (@ParadaCarleton) - Fix Wrong quantiles calculated for some Truncated #1726 (#1727) (@waldie11) - Fix typo (#1729) (@pitmonticone)

- Julia
Published by github-actions[bot] over 2 years ago

Distributions - v0.25.95

Distributions v0.25.95

Diff since v0.25.94

Merged pull requests: - Improve accuracy of logdiffcdf(::Normal, x, y) (#1728) (@devmotion)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.94

Distributions v0.25.94

Diff since v0.25.93

Closed issues: - Adding order statistics sampling (#1284)

Merged pull requests: - Add OrderStatistic and JointOrderStatistics distributions (#1668) (@sethaxen) - Add the Kumaraswamy distribution (#1699) (@ararslan) - Fix wrong parameter on chisq.jl documentation (#1725) (@ynhame)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.93

Distributions v0.25.93

Diff since v0.25.92

Merged pull requests: - Fix inference failures (#1722) (@devmotion)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.92

Distributions v0.25.92

Diff since v0.25.91

Merged pull requests: - Store nothing bounds in Truncated (#1720) (@devmotion)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.91

Distributions v0.25.91

Diff since v0.25.90

Merged pull requests: - Add the Johnson's S_U-distribution (continued) (#1690) (@Yuan-Ru-Lin) - Improve type stability for truncated normal moments (#1717) (@ararslan)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.90

Distributions v0.25.90

Diff since v0.25.89

Closed issues: - categorical rand can be 250x faster (#1718)

Merged pull requests: - Implement StatsAPI.pvalue (#1719) (@devmotion)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.89

Distributions v0.25.89

Diff since v0.25.88

Closed issues: - qqbuild automatically throws out min and max values (#1378)

Merged pull requests: - CompatHelper: bump compat for GR to 0.72 for package docs, (keep existing compat) (#1707) (@github-actions[bot]) - Make sure qqbuild does not drop min and max value (#1708) (@scheidan)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.88

Distributions v0.25.88

Diff since v0.25.87

Closed issues: - Inconsistency in product_distribution argument (#1706)

Merged pull requests: - Support StatsBase 0.34 (#1714) (@ararslan)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.87

Distributions v0.25.87

Diff since v0.25.86

Closed issues: - Allow Reflections by Removing Positivity Constraint for LocationScale (#1441)

Merged pull requests: - CompatHelper: bump compat for FillArrays to 1, (keep existing compat) (#1704) (@github-actions[bot])

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.86

Distributions v0.25.86

Diff since v0.25.85

Closed issues: - Reproducibility with global rng & distributions with Julia 1.8.5 (#1687)

Merged pull requests: - Make ChainRulesCore and DensityInterface weak dependencies (#1686) (@devmotion)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.85

Distributions v0.25.85

Diff since v0.25.84

Closed issues: - DiscreteNonParametric == throws error (#1140) - Broken ≈ for the Categorical distribution on Julia 1.6 (#1675)

Merged pull requests: - Fix comparisons of DiscreteNonParametric (#1683) (@devmotion)

- Julia
Published by github-actions[bot] almost 3 years ago

Distributions - v0.25.84

Distributions v0.25.84

Diff since v0.25.83

Merged pull requests: - Add the one-parameter Lindley distribution (#1678) (@ararslan)

- Julia
Published by github-actions[bot] about 3 years ago

Distributions - v0.25.83

Distributions v0.25.83

Diff since v0.25.82

Closed issues: - Uniform{Float32} pdf and cdf return inconsistent types (#1677)

Merged pull requests: - Fix inconsistency of pdf/cdf of Uniform (#1682) (@devmotion)

- Julia
Published by github-actions[bot] about 3 years ago

Distributions - v0.25.82

Distributions v0.25.82

Diff since v0.25.81

Closed issues: - Irreproducible sampling results for PGeneralizedGaussian and SkewedExponentialPower (#1663)

Merged pull requests: - SkewedExponentialPower, PGeneralizedGaussian: reproducible rand (#1664) (@philbit)

- Julia
Published by github-actions[bot] about 3 years ago

Distributions - v0.25.81

Distributions v0.25.81

Diff since v0.25.80

Closed issues: - DirichletMultinomial missing docstring (#1601) - Use keyword arguments for distribution parameters (#1661) - Inconsistent (co)variance between Normal and MvNormal (#1662) - Wishart rand promotes to Float64 (#1666) - TriangularDist: pdf & cdf incorrectly specified (#1673)

Merged pull requests: - add docstring for DirichletMultinomial (#1656) (@pri1311) - change some floating point equality checks to approximate (#1671) (@KristofferC) - fix cdf & pdf for TriangularDist (#1674) (@jwright11) - Replace GLOBAL_RNG with default_rng() (#1679) (@quildtide) - Add vectorized rand for Normal dist (#1680) (@quildtide) - fix typos (#1681) (@spaette)

- Julia
Published by github-actions[bot] about 3 years ago

Distributions - v0.25.80

Distributions v0.25.80

Diff since v0.25.79

Closed issues: - pdf(d, range) takes more time because it calls excessive pdf(d, v) internally (#636) - Standard MvNormal, Inconsistency with Normal, and I (#826) - Inconsistency between single-arg MvNormal and Normal (#1203) - No power law distribution? (#1599) - Ambiguities with 0-dimensional arrays and univariate distributions (#1650) - Dirichlet pdf/ logpdf (#1652) - Affine distributions with useless requirements ? (#1653)

Merged pull requests: - CompatHelper: bump compat for GR to 0.71 for package docs, (keep existing compat) (#1642) (@github-actions[bot]) - Add Dependabot configuration for GitHub Actions updates (#1646) (@EwoutH) - Bump codecov/codecov-action from 1 to 3 (#1647) (@dependabot[bot]) - Bump actions/cache from 1 to 3 (#1648) (@dependabot[bot]) - Bump actions/checkout from 2 to 3 (#1649) (@dependabot[bot]) - Generalize affine distributions to negative scales (#1657) (@ParadaCarleton)

- Julia
Published by github-actions[bot] about 3 years ago

Distributions - v0.25.79