geometricclusteranalysis.jl

Geometric methods for Cluster Analysis

https://github.com/pnavaro/geometricclusteranalysis.jl

Science Score: 54.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
    Found CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    2 of 5 committers (40.0%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (11.0%) to scientific vocabulary

Keywords

cluster-analysis julialang

Keywords from Contributors

hack standardization interpretability meshing pinn interaction robust parallel numerical-methods projections
Last synced: 6 months ago · JSON representation ·

Repository

Geometric methods for Cluster Analysis

Basic Info
Statistics
  • Stars: 4
  • Watchers: 1
  • Forks: 0
  • Open Issues: 11
  • Releases: 0
Topics
cluster-analysis julialang
Created over 4 years ago · Last pushed 9 months ago
Metadata Files
Readme License Citation

README.md

GeometricClusterAnalysis.jl

Julia implementation of data clustering using underlying geometric and topological features.

WARNING: This package is not registered and may be subject to breaking changes anytime.

Build Status codecov Aqua QA

Documentation:

Installation

Download Julia. Try the package with

bash git clone https://github.com/pnavaro/GeometricClusterAnalysis.jl cd GeometricClusterAnalysis.jl julia --project

julia import Pkg Pkg.instantiate() include("examples/two_spirals.jl")

Clustering Algorithms

  • K-plm
  • K-pdtm
  • ToMaTo

See Also

Topological Data Analysis - Ripserer.jl - PersistenceDiagrams.jl - ClusteringToMaTo.jl - RobustTDA.jl - JuliaTDA: Topological Data Analysis in Julia - TDA.jl: the project seems to have been abandoned, but there are still some interesting implementations in the source code.

Julia packages providing clustering methods: - Clustering.jl - ClusterAnalysis.jl - ParallelKMeans.jl - QuickShiftClustering.jl - SpectralClustering.jl

Owner

  • Name: Pierre Navaro
  • Login: pnavaro
  • Kind: user
  • Location: Rennes
  • Company: CNRS

Scientific Software Engineer, Institut de Recherche Mathématique de Rennes, France.

Citation (CITATION.bib)

@unpublished{brecheteau:hal-02266408,
  TITLE = {{A k-points-based distance for robust geometric inference}},
  AUTHOR = {Br{\'e}cheteau, Claire and Levrard, Cl{\'e}ment},
  URL = {https://hal.archives-ouvertes.fr/hal-02266408},
  NOTE = {working paper or preprint},
  YEAR = {2019},
  MONTH = Aug,
  PDF = {https://hal.archives-ouvertes.fr/hal-02266408/file/k_PDTM_version_finale_arxiv2.pdf},
  HAL_ID = {hal-02266408},
  HAL_VERSION = {v1},
}

GitHub Events

Total
  • Delete event: 1
  • Issue comment event: 1
  • Push event: 1
  • Pull request event: 1
  • Create event: 1
Last Year
  • Delete event: 1
  • Issue comment event: 1
  • Push event: 1
  • Pull request event: 1
  • Create event: 1

Committers

Last synced: 7 months ago

All Time
  • Total Commits: 443
  • Total Committers: 5
  • Avg Commits per committer: 88.6
  • Development Distribution Score (DDS): 0.079
Past Year
  • Commits: 6
  • Committers: 1
  • Avg Commits per committer: 6.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Pierre Navaro p****o@m****r 408
Claire Brécheteau c****u@u****r 20
github-actions[bot] 4****] 7
clairebrecheteau 9****u 4
dependabot[bot] 4****] 4
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 7 months ago

All Time
  • Total issues: 25
  • Total pull requests: 29
  • Average time to close issues: 4 months
  • Average time to close pull requests: 3 days
  • Total issue authors: 2
  • Total pull request authors: 4
  • Average comments per issue: 1.12
  • Average comments per pull request: 0.34
  • Merged pull requests: 20
  • Bot issues: 0
  • Bot pull requests: 19
Past Year
  • Issues: 2
  • Pull requests: 7
  • Average time to close issues: 5 days
  • Average time to close pull requests: 2 days
  • Issue authors: 1
  • Pull request authors: 2
  • Average comments per issue: 0.5
  • Average comments per pull request: 1.0
  • Merged pull requests: 6
  • Bot issues: 0
  • Bot pull requests: 5
Top Authors
Issue Authors
  • clairebrecheteau (20)
  • pnavaro (5)
Pull Request Authors
  • github-actions[bot] (14)
  • pnavaro (9)
  • dependabot[bot] (9)
  • clairebrecheteau (3)
Top Labels
Issue Labels
ToDo (14) bug (5) enhancement (1) documentation (1)
Pull Request Labels
documentation (3) bug (2)

Dependencies

.github/workflows/main.yml actions
  • actions/cache v1 composite
  • actions/checkout v2 composite
  • julia-actions/julia-buildpkg latest composite
  • julia-actions/julia-docdeploy latest composite
  • julia-actions/julia-runtest latest composite
  • julia-actions/setup-julia v1 composite
  • r-lib/actions/setup-r v2 composite