mychem-code

Mychem is an extension for MySQL that makes possible to use cheminformatics functions within SQL queries.

https://github.com/mychem/mychem-code

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Academic email domains
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (9.5%) to scientific vocabulary
Last synced: 6 months ago · JSON representation

Repository

Mychem is an extension for MySQL that makes possible to use cheminformatics functions within SQL queries.

Basic Info
  • Host: GitHub
  • Owner: mychem
  • License: gpl-2.0
  • Language: C
  • Default Branch: master
  • Size: 234 KB
Statistics
  • Stars: 21
  • Watchers: 9
  • Forks: 16
  • Open Issues: 1
  • Releases: 3
Created about 11 years ago · Last pushed about 1 year ago
Metadata Files
Readme Changelog License Authors Codemeta

README.rst

The Mychem Project
==================

Mychem is a chemoinformatics extension for MySQL. This extension
provides a set of functions that handles chemical data within the MySQL
(or MariaDB) database. Mychem is based on `Open Babel `_.
As Open Babel is a high-quality software in chemoinformatics, Mychem
provides reliable and fast functions. These functions permit you to
search, analyze and convert chemical data.

More information are available from the `Mychem Website `_.


Documentation
-------------

A complete and detailed documentation is available `online `_.
A `pdf version `_ can also be
downloaded.


Installation
------------

See the `INSTALL.rst `_
file for the installation instructions on GNU/Linux. Instructions for
Mac OS X and Windows are given on the dedicated
`documentation page `_ .


License
-------

Mychem is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation version 2 of the License, or
(at your option) any later version. Full details
can be found in the `COPYING `_
file.

Owner

  • Name: Mychem
  • Login: mychem
  • Kind: organization

Chemical functions for MySQL and MariaDB

CodeMeta (codemeta.json)

{
  "@context": "https://doi.org/10.5063/schema/codemeta-2.0",
  "@type": "SoftwareSourceCode",
  "license": "https://spdx.org/licenses/GPL-2.0+",
  "codeRepository": "https://github.com/mychem/mychem-code.git",
  "dateCreated": "2010-07-06",
  "datePublished": "2010-07-06",
  "dateModified": "2025-02-01",
  "downloadUrl": "https://github.com/mychem/mychem-code/archive/refs/tags/2.0.0.tar.gz",
  "issueTracker": "https://github.com/mychem/mychem-code/issues",
  "name": "Mychem",
  "version": "2.0.0",
  "identifier": "https://zenodo.org/records/14786457",
  "description": "Mychem is a chemoinformatics extension for MySQL and MariaDB. It provides a set of functions that permits to handle chemical data within the database. These functions permit to search, analyze and convert chemical data.",
  "applicationCategory": "Chemistry",
  "programmingLanguage": [
    "C",
    "C++"
  ],
  "operatingSystem": [
    "Linux",
    "MacOS X",
    "Windows"
  ],
  "softwareRequirements": [
    "OpenBabel"
  ],
  "author": [
    {
      "@type": "Person",
      "@id": "https://orcid.org/0000-0002-7067-5009",
      "givenName": "Jérôme",
      "familyName": "Pansanel",
      "email": "jerome.pansanel@iphc.cnrs.fr",
      "affiliation": {
        "@type": "Organization",
        "name": "IPHC, University of Strasbourg, CNRS"
      }
    },
    {
      "@type": "Person",
      "givenName": "Aurélie",
      "familyName": "De Luca",
      "email": "aureliedeluca@gmail.com"
    },
    {
      "@type": "Person",
      "@id": "https://orcid.org/0000-0002-2812-8255",
      "givenName": "Fredrik",
      "familyName": "Wallner",
      "email": "fredrik@wallner.nu",
      "affiliation": {
        "@type": "Organization",
        "name": "Irlab Therapeutics"
      }
    },
    {
      "@type": "Person",
      "@id": "https://orcid.org/0000-0002-3079-6586",
      "givenName": "Bjoern",
      "familyName": "Gruening",
      "email": "bjoern@gruenings.eu",
      "affiliation": {
        "@type": "Organization",
        "name": "University of Freiburg"
      }
    },
    {
      "@type": "Person",
      "@id": "https://orcid.org/0000-0002-7731-6236",
      "givenName": "Andrius",
      "familyName": "Merkys",
      "email": "andrius.merkys@gmail.com",
      "affiliation": {
        "@type": "Organization",
        "name": "Vilnius University"
      }
    }
  ]
}

GitHub Events

Total
  • Create event: 1
  • Release event: 1
  • Issues event: 3
  • Issue comment event: 13
  • Push event: 18
  • Pull request event: 20
  • Fork event: 2
Last Year
  • Create event: 1
  • Release event: 1
  • Issues event: 3
  • Issue comment event: 13
  • Push event: 18
  • Pull request event: 20
  • Fork event: 2

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 3
  • Total pull requests: 11
  • Average time to close issues: almost 4 years
  • Average time to close pull requests: over 1 year
  • Total issue authors: 2
  • Total pull request authors: 3
  • Average comments per issue: 1.0
  • Average comments per pull request: 3.18
  • Merged pull requests: 9
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 8
  • Average time to close issues: N/A
  • Average time to close pull requests: about 7 hours
  • Issue authors: 1
  • Pull request authors: 2
  • Average comments per issue: 0.0
  • Average comments per pull request: 1.0
  • Merged pull requests: 8
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • merkys (2)
  • Pansanel (1)
Pull Request Authors
  • Pansanel (8)
  • merkys (2)
  • studur (1)
Top Labels
Issue Labels
enhancement (2) question (1)
Pull Request Labels
enhancement (1)

Dependencies

.github/workflows/cmake-multi-platform.yml actions
  • actions/checkout v4 composite